BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924959
Length=1441
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18330.2 | Symbols: | Translation elongation factor EF1A/in... 1554 0.0
AT2G18720.1 | Symbols: | Translation elongation factor EF1A/in... 1360 0.0
AT1G04170.1 | Symbols: EIF2 GAMMA | eukaryotic translation init... 1319 0.0
> AT4G18330.2 | Symbols: | Translation elongation factor EF1A/initiation
factor IF2gamma family protein | chr4:10126579-10128734
FORWARD LENGTH=1659
Length=1659
Score = 1554 bits (841), Expect = 0.0
Identities = 1214/1394 (87%), Gaps = 26/1394 (2%)
Strand=Plus/Plus
Query 32 CAAGGGTTTAGCTGAACAAGATCTAAGTAAGCTTGATGTAA-ATGAGCTACATCCTCTGT 90
||||||||| || || |||||||||| |||||||||||||| | || ||||||||||||
Sbjct 126 CAAGGGTTTGGCGGAGCAAGATCTAACTAAGCTTGATGTAACA-AAGTTACATCCTCTGT 184
Query 91 CTCCCGAGGTCATATCTCGCCAGGCAACCATAAACATAGGAACCATTGGACATGTTGCAC 150
||| || ||||| |||||||| ||||||||||| || ||||||||||| ||||| || |
Sbjct 185 TTCCTGAAGTCATTTCTCGCCAAGCAACCATAAATATCGGAACCATTGGTCATGTCGCTC 244
Query 151 ACGG-AAAGTCTACGGTTGTGAAAGCTATTTCTGGTGTGCAGACTGTCCGTTTTAAGAAT 209
|||| ||| || || | ||||||||||| |||||||| |||||||| ||||||||||||
Sbjct 245 ACGGTAAA-TCGACTATAGTGAAAGCTATCTCTGGTGTTCAGACTGTGCGTTTTAAGAAT 303
Query 210 GAATTGGAGCGTAACATTACCATTAAACTTGGATATGCAAATGCCAAGATTTACCAA-TG 268
||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| ||| ||
Sbjct 304 GAATTAGAGCGTAACATTACCATTAAGCTTGGTTATGCAAATGCAAAGATTTA-CAAGTG 362
Query 269 TGAGGATAACAAGTGCCCTAGACCAATGTGCTACAAGTCTTATGGGAGTGGGAAAGAAGA 328
||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 363 TGAGGATGACAAGTGCCCTAGACCAATGTGCTACAAGTCATATGGGAGTGGAAAAGAAGA 422
Query 329 CAACCCAAATTGCCATGTCCCTGGATTTGAGAACTGCAAGATGA-AGCTACTGAGGCATG 387
|||||||| ||| ||||||| ||||||||||| |||||||||| | |||| ||| ||||
Sbjct 423 CAACCCAACTTGTGATGTCCCCGGATTTGAGAATTGCAAGATGACA-CTACGGAGACATG 481
Query 388 TCTCCTTTGTGGATTGCCCGGGACATGATATTCTCATGGCCACAATGCTCAATGGGGCCG 447
|||| | ||| ||||| ||||||||||||||||| ||||| |||||||||||||| || |
Sbjct 482 TCTCATGTGTCGATTGTCCGGGACATGATATTCTTATGGCGACAATGCTCAATGGAGCAG 541
Query 448 CCATCATGGATGGTGCTCTACTTTTAATTGCTGCGAATGAG-GTCTGTCCTCAACCACAG 506
| ||| ||||||||||| ||||| |||||||||| || ||| || ||||| ||||||||
Sbjct 542 CAATCGTGGATGGTGCTTTACTTCTAATTGCTGCTAACGAGAGT-TGTCCACAACCACAA 600
Query 507 ACAGCTGAACATCTTGCTTCCGTCGATATGATGCACCTTAAGCATATTATAATCCTTCAG 566
|| ||||||||||||||||| || |||||||||| |||||||||||| ||||||||||||
Sbjct 601 ACCGCTGAACATCTTGCTTCTGTTGATATGATGCGCCTTAAGCATATCATAATCCTTCAG 660
Query 567 AACAAGATTGATCTCATTCAA-GAAAAAGCCGCCATC-GAACAGCAC-ACGGCAATTCAG 623
|||||||||||||||||| || || |||||||||| | ||||||||| | ||| ||||||
Sbjct 661 AACAAGATTGATCTCATT-AATGAGAAAGCCGCCA-CTGAACAGCACGA-GGCTATTCAG 717
Query 624 AGATTTATAACGAACACAAATGCCGAGGGTGCCCCTATAGTTCCTGTCTCAGCACAACTG 683
| ||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||||||
Sbjct 718 AAATTTATAACGAACACGAATGCTGAGGATGCACCTATAGTTCCTGTCTCAGCACAACTG 777
Query 684 AAATACAACATTGATGCTGTGTGCGAGTACATTGTCAAGAAGATTCCAATCCCTAAAAGG 743
|||||||||||||||| |||| | || ||||||||||||||||||||||||||| ||
Sbjct 778 AAATACAACATTGATGTTGTGAGTGAATACATTGTCAAGAAGATTCCAATCCCTGTGAGA 837
Query 744 GATTTTGTGTCACCGCCAAAGATGATAATCATTCGTTCTTTTGATGTCAATAAACCTGGC 803
|| ||||||||||| ||||||||||| | ||||||||||| ||||||||||||||||||
Sbjct 838 GACTTTGTGTCACCACCAAAGATGATTGTGATTCGTTCTTTCGATGTCAATAAACCTGGC 897
Query 804 TATGAGGTT-ACTGATATTAAAGGTGGAGTGGCAGGTGGAAGTATCTTCCGGGGTGTTTT 862
| | || | | ||| || |||||||| || || |||||||||||| ||| |||||||||
Sbjct 898 TCGGCGGGTCA-TGAAATGAAAGGTGGTGTTGCTGGTGGAAGTATCCTCCAGGGTGTTTT 956
Query 863 GAAAGTAAACCAATTGATTGAGATCCGACCTGGTATCGTTAGCAAAGATGAGCTTGGAAA 922
|||||| |||||| ||||||| || ||||||||||| | |||||||||||| ||||||
Sbjct 957 GAAAGTGAACCAACTGATTGAAATTAGACCTGGTATCACTGGCAAAGATGAGCATGGAAA 1016
Query 923 CCCAAGATGCTCTCCCATTTACTCCCGTATCACTTCATTGTACGCAGAACAGAACGAGCT 982
| ||| |||| |||| |||||||| ||||| |||||| | ||||| ||||||||||||||
Sbjct 1017 CTCAAAATGCACTCCAATTTACTCGCGTATAACTTCACTATACGCGGAACAGAACGAGCT 1076
Query 983 TCAGTTTGCTGTGCCGGGAGGTCTGATCGGAGTTGGGACAACGATGGACCCTACGCTCAC 1042
|||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||| ||
Sbjct 1077 TCAGTTTGCTGTACCGGGAGGTCTAATCGGAGTTGGAACAACCATGGACCCTACGCTTAC 1136
Query 1043 GCGTGCTGATAGGTTGGTTGGTCAAGTGCTTGGTGAAATGGGTTCTCTCCCTGATGTCTA 1102
||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||
Sbjct 1137 GCGTGCTGATAGGTTGGTTGGTCAAGTCCTTGGTGAAATGGGTACTCTCCCTGACGTCTT 1196
Query 1103 TGTTGAGCTTGAGGTGAGTTTCCAGCTTCTGACCCGTCTTATTGGGGTGAGGACAAAGGA 1162
|||||||||||| || |||| |||||||||||| ||||| ||||| ||||||||||||||
Sbjct 1197 TGTTGAGCTTGAAGTAAGTTACCAGCTTCTGACTCGTCTCATTGGAGTGAGGACAAAGGA 1256
Query 1163 AAAAGAGAAGCAGATGAAAGTGGCAAAGCTAAGCAAGGGAGAGATACTGATGGTGAACAT 1222
|||||||||||| ||||||||| ||||||||| ||| | ||||||| |||||||||||||
Sbjct 1257 AAAAGAGAAGCAAATGAAAGTGTCAAAGCTAACCAAAGAAGAGATATTGATGGTGAACAT 1316
Query 1223 CGGGTCGATGTCGGCGGGAGCTAAGGTTCTAGGAGTGAAGAAAGATATGATGAAAGTGCA 1282
|||||| ||||| |||||||||||||| | ||||| |||||||||||| ||||| | ||
Sbjct 1317 CGGGTCTATGTCTACGGGAGCTAAGGTTATTGGAGTCAAGAAAGATATGGTGAAACTCCA 1376
Query 1283 ACTGACAGTG-CCTGTCTGCACCAACATAGGAGAGAAGGTGGCTCTAAGCCGCCGTGTCG 1341
|||||| || || || || |||| ||||||||||||||| ||| ||||||| |||||||
Sbjct 1377 ACTGAC-GTCTCCGGTGTGTACCACCATAGGAGAGAAGGTTGCTTTAAGCCGACGTGTCG 1435
Query 1342 ACAGGCATTGGCGTTTGATTGGTC-GTGGTCAGATTGA-GGCTGGAACCACCGTTCCC-G 1398
| |||||||||||| | |||||| | ||||||||| | ||||||||||||| | | |
Sbjct 1436 ATAGGCATTGGCGTCTAATTGGTAAG-GGTCAGATT-ATGGCTGGAACCACCAT-CGATG 1492
Query 1399 TCCCTCCTCCTCCT 1412
| ||||||||||||
Sbjct 1493 TTCCTCCTCCTCCT 1506
> AT2G18720.1 | Symbols: | Translation elongation factor EF1A/initiation
factor IF2gamma family protein | chr2:8114920-8116811
REVERSE LENGTH=1465
Length=1465
Score = 1360 bits (736), Expect = 0.0
Identities = 1184/1398 (85%), Gaps = 40/1398 (3%)
Strand=Plus/Plus
Query 32 CAAGGGTTTAGCTGAACAAGATCTAAGTAAGCTTGATGTAAATGAGCTACATCCTCTGTC 91
|||||| ||||||||||||||||||||||| ||||||||| | |||| |||||||| ||
Sbjct 79 CAAGGGCTTAGCTGAACAAGATCTAAGTAAACTTGATGTAGCTCAGCTGCATCCTCTCTC 138
Query 92 TCCCGAGGTCATATCTCGCCAGGCAACCATAAACATAGGAACCATTGGACATGTTGCACA 151
||| |||||||| ||||| || || ||||| ||||||||||||||||| ||||| || ||
Sbjct 139 TCCTGAGGTCATCTCTCGTCAAGCCACCATTAACATAGGAACCATTGGCCATGTCGCTCA 198
Query 152 C-GGAAAGTCTACGGTTGTGAAAGCTATTTCTGGTGTGCAGACTGTCCGTTTTAAGAATG 210
| ||||| || || | |||||||| |||| |||||||| |||||| || |||| ||
Sbjct 199 CGGGAAA-TCGACAATCGTGAAAGCCGTTTCCGGTGTGCACACTGTCAAATTCAAGAGTG 257
Query 211 AATTGGAGCGTAACATTACCATTAAACTTGGATATGCAAATGCCAAGATTTACCAATGTG 270
||||||||||||||||||||||||||||||| || ||||| || ||||||||| ||||||
Sbjct 258 AATTGGAGCGTAACATTACCATTAAACTTGGTTACGCAAACGCAAAGATTTACAAATGTG 317
Query 271 AGGATAACAAGTGCCCTAGACCAATGTGC-TACAAGTCTTAT-GGGAGTGGGAAAGAAGA 328
| | || | |||||||||||| | || |||||||||| | |||||||| ||||||||
Sbjct 318 A--A-AA-A--TGCCCTAGACCAGTA-GCCTACAAGTCTT-TCGGGAGTGGCAAAGAAGA 369
Query 329 CAACCCAAATTGCCATGTCCCTGGATTTGAGAACTGCAAGATGAAGCTACTGAGGCATGT 388
|||||||| ||| ||||| ||||| |||||| | ||||||||| ||||| || |||||
Sbjct 370 CAACCCAAGTTGTGATGTCTCTGGACATGAGAAGTACAAGATGAAACTACTAAGACATGT 429
Query 389 CTCCTTTGTGGATTGCCCGGGACATGATATTCTCATGGCCACAATGCTCAATGGGGCCGC 448
||| ||||| |||||||||||||| ||||| || ||||| |||||||| ||||| || ||
Sbjct 430 CTCATTTGTTGATTGCCCGGGACACGATATCCTAATGGCGACAATGCTGAATGGAGCAGC 489
Query 449 CATCATGGATGGTGCTCTACTTTTAATTGCTGCGAATGAGGTC-TGTCCTCAACCACAGA 507
|| |||||||||||| |||| | ||||||||||||||| | ||||| |||||||| |
Sbjct 490 GATTATGGATGGTGCTTTACTAATCATTGCTGCGAATGAGA-CATGTCCACAACCACAAA 548
Query 508 CAGCTGAACATCTTGCTTCCGTCGATATGATGCACCTTAA-GCATATTATAATCCTTCAG 566
||||||||||||||||||| || ||||||||||| ||||| | |||| |||||| |||||
Sbjct 549 CAGCTGAACATCTTGCTTCTGTTGATATGATGCATCTTAAAG-ATATCATAATCATTCAG 607
Query 567 AACAAGATTGATCTCATTCAAGAAAAAGCCGCCATCGAACAGCAC-ACGG-CAATTCAGA 624
||||||||||||||||| |||||||| | || || |||||||| | || || | ||||
Sbjct 608 AACAAGATTGATCTCATCCAAGAAAACGAGGCTATTAAACAGCACGA-GGACA-TCCAGA 665
Query 625 GATTTATAACGAACACAAATGCCGAGGGTGCCCCTATAGTTCCTGTCTCAGCACAACTGA 684
|||||||||||||||| ||||| || ||||| |||||||||||||||||||| |||||||
Sbjct 666 GATTTATAACGAACACGAATGCGGAAGGTGCTCCTATAGTTCCTGTCTCAGCGCAACTGA 725
Query 685 AATACAACATTGATGCTGTGTGCGAGTACATTGTCAAGAAGATTCCAATCCCTAAAAGGG 744
|||||||||| |||| | |||| |||||||||||||||||||||||| ||||| ||||
Sbjct 726 AATACAACATCGATGTTTTGTGTGAGTACATTGTCAAGAAGATTCCACTCCCTGTGAGGG 785
Query 745 ATTTTGTGTCACCGCCAAAGA-TGATAATCATTCGTTCTTTTGATGTCAATAAACCTGGC 803
||||||||||||| |||| || |||| | ||||||||||||||||||||||||||||||
Sbjct 786 ATTTTGTGTCACCTCCAA-GAATGATTGTGATTCGTTCTTTTGATGTCAATAAACCTGGC 844
Query 804 TATGAGGTTACTGATA-T-T-AAAGGTGGAGTGGCAGGTGGAAGTATC-TTCCGGGGTGT 859
| ||| ||| |||| | | ||||||||||| |||||||| |||||| ||| ||| |||
Sbjct 845 TCTGA--TTA-TGATGGTATGAAAGGTGGAGTTGCAGGTGGGAGTATCCTTCAGGG-TGT 900
Query 860 TTTGAAAGTAAACCA-ATTGATTGAGATCCGACCTGGTATCGTTAGCAAAGATGAGCTTG 918
|||||| || || || || ||||| ||||||| ||| ||| ||||||||| ||
Sbjct 901 TTTGAAGGTGGGGCATATA-ATAGAGATAAGACCTGGAATCACTAGAAAAGATGAGAATG 959
Query 919 GAAACCC-AAGATGCTCTCCCATTTACTCCCGTATCACTTCATTGTACGCAGAACAGAAC 977
|| || | || |||| ||||||||||| | ||||| |||||||||||||| |||||||||
Sbjct 960 GAGACACTAA-ATGCACTCCCATTTACACGCGTATAACTTCATTGTACGCGGAACAGAAC 1018
Query 978 GAGCTTCAGTTTGCTGTGCCGGGAGGTCTGATCGGAGTTGGGACAA-CGATGGACCCTAC 1036
||||||||||||||||| ||||||||| |||| ||| ||||||||| | ||||| |||||
Sbjct 1019 GAGCTTCAGTTTGCTGTCCCGGGAGGTTTGATTGGAATTGGGACAAGC-ATGGATCCTAC 1077
Query 1037 GCTCACGCGTGCTGATAGGTTGGTTGGTCAAGTGCTTGGTGAAATGGGTTCTCTCCCTGA 1096
||| ||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||||
Sbjct 1078 GCTTACGCGTGGTGATAGGTTAGTTGGTCAAGTCCTTGGTGAAATAGGTACTCTCCCTGA 1137
Query 1097 TGTCTATGTTGAGCTTGAGGTGAGTTTCCAGCTTCTGACCCGTCTTATTGGGGTGAGGAC 1156
|||||||||||| ||||| |||||||||||||||||||| ||||| ||||| |||| |||
Sbjct 1138 TGTCTATGTTGAACTTGAAGTGAGTTTCCAGCTTCTGACACGTCTCATTGGAGTGAAGAC 1197
Query 1157 AAAGGAAAAAGAGAAGCAGATGAAAGTGGCAAAGCTAAG-CAAGGGAGAGATACTGATGG 1215
|||||||| ||||| ||| |||| |||| |||||||| | |||||||||||||||||||
Sbjct 1198 AAAGGAAACAGAGAGGCAAATGAGAGTGTCAAAGCTA-GTCAAGGGAGAGATACTGATGT 1256
Query 1216 TGAACATCGGGTCGATGTCGGCGGGAGCTAAGGTTCTAGGAGTGAAGAAAGATATGATGA 1275
|||| ||||| |||||||| ||||||||| |||| | ||||| |||||||||||| |||
Sbjct 1257 TGAATATCGGATCGATGTCTACGGGAGCTATGGTTATTGGAGTAAAGAAAGATATGGTGA 1316
Query 1276 AAGTGCAA-CTGACAGTGCCTGTCTGCACCAACATAGGAGAGAAGGTGGCTCTAAGCCGC 1334
|||| || |||||| | ||||| ||||||| ||| |||||||| |||||| |||| |||
Sbjct 1317 AAGTT-AATCTGACACTCCCTGTGTGCACCAGCATTGGAGAGAAAGTGGCTATAAGTCGC 1375
Query 1335 CGTGTCGACAGGCATTGGCGTTTGATTGGTCGTGGTCAGATTGAGGCTGGAACCACCGTT 1394
||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||| ||
Sbjct 1376 CGTGTGGATAGGCATTGGCGTTTGATCGGTCGCGGTCAGATTGAGGCTGGAACCACCATT 1435
Query 1395 CCCGTCCCTCCTCCTCCT 1412
||||| ||||||||
Sbjct 1436 TTTATCCCTTCTCCTCCT 1453
> AT1G04170.1 | Symbols: EIF2 GAMMA | eukaryotic translation initiation
factor 2 gamma subunit | chr1:1096946-1099898 FORWARD
LENGTH=1793
Length=1793
Score = 1319 bits (714), Expect = 0.0
Identities = 1170/1390 (84%), Gaps = 32/1390 (2%)
Strand=Plus/Plus
Query 18 ATAATGGGGTGGAGCAAGGGTTTAGCTGAACAAGATC-TAAGTAAGCTT-GATGTAAATG 75
|||||| | ||| ||||||||| ||||| ||||||| ||| || || ||||||| ||
Sbjct 197 ATAATGTCGAGGAACAAGGGTTTGGCTGAGCAAGATCTTAA--AAAATTGGATGTAACTG 254
Query 76 AGCTACATCCTCTGTCTCCCGAGGTCATATCTCGCCAGGCAACCATAAACATAGGAACCA 135
|||||||||||||||||| |||||||| ||||||||||| || || || ||||||||||
Sbjct 255 TGCTACATCCTCTGTCTCCTGAGGTCATTTCTCGCCAGGCCACTATTAATATAGGAACCA 314
Query 136 TTGGACATGTTGCACACGGAAAGTCTACGGTTGTGAAAGCTATTTCTGGTGTGCAGACTG 195
|||| ||||| || || |||||||| || ||||| ||||||||||||||||| |||||||
Sbjct 315 TTGGTCATGTCGCTCATGGAAAGTCCACTGTTGTTAAAGCTATTTCTGGTGTCCAGACTG 374
Query 196 TCCGTTTTAAGAATGAATTGGAGCGTAACATTACCATTAAACTTGGATATGCAAATGCCA 255
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 375 TCCGTTTTAAAAATGAATTGGAGCGTAACATTACCATTAAGCTTGGATATGCAAACGCCA 434
Query 256 AGATTTACCAATGTGAGGATAACAAGTGCCCTAGACCAATGTGCTACAAGTCTTATGGGA 315
|||||||| ||||||||||| | || |||||||||||||||||||||||| | || || |
Sbjct 435 AGATTTACAAATGTGAGGATGAGAAATGCCCTAGACCAATGTGCTACAAGGCCTACGGAA 494
Query 316 GTGGGAAA-GAAGACAAC-CCAAATTGCCATGTCCCTGGATTTGAGAACTGCAAGATGAA 373
|| ||||| |||||| || || ||||| ||||||| |||||||| |||| |||||||||
Sbjct 495 GT-GGAAAGGAAGAC-ACTCCCAATTGTGATGTCCCCGGATTTGAAAACTCCAAGATGAA 552
Query 374 GCTACTGAGGCATGTCTCCTTTGTGGATTGCCCGGGACATGATATTCTCATGGCCACAAT 433
||| ||||||||||||| || || ||||||||||| || |||||||||||||| |||||
Sbjct 553 ACTATTGAGGCATGTCTCATTCGTTGATTGCCCGGGTCACGATATTCTCATGGCAACAAT 612
Query 434 GCTCAATGGGGCCGCCATCATGGATGGTGCTCTACTTTTAATTGCTGCGAATG-AGGTCT 492
||| ||||| || ||||||||||||||||| ||||||||||| ||||| |||| | | |
Sbjct 613 GCTTAATGGAGCAGCCATCATGGATGGTGCACTACTTTTAATCGCTGCAAATGAAACT-T 671
Query 493 GTCCTCAACCACAGACAG-CTGAACATCTTGCTTCCGTCGATATGATGCACCTTAAGCAT 551
|||| |||||||| || | |||||||||||||| |||| || || ||||| |||||||||
Sbjct 672 GTCCACAACCACAAAC-GTCTGAACATCTTGCTGCCGTTGAGATTATGCAACTTAAGCAT 730
Query 552 ATTATAATCCTTCAGAACAAGATTGATCTCATTCAAGAAAAAGCCGCCATCGAA-CAGCA 610
|| || ||||||||||||||||||||||| |||||||| || | ||||| || |||||
Sbjct 731 ATCATCATCCTTCAGAACAAGATTGATCTTATTCAAGAGAATGTTGCCAT-TAATCAGCA 789
Query 611 C-ACGGCAATTCAGAGATTTATAACGAACACAAATGCCGAGGGTGCCCCTATAGTTCCTG 669
| | ||||||||||| |||||||| |||||| ||| || | ||| || || || ||||
Sbjct 790 CGA-GGCAATTCAGAAATTTATAATGAACACTGTTGCTGATGCTGCTCCGATCGTCCCTG 848
Query 670 TCTCAGCACAACTGAAATACAACATTGATGCTG-TGTGCGAGTACATTGTCAAGAAGATT 728
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 849 TCTCAGCACAACTGAAATACAACATTGATG-TGGTGTGCGAGTACATTGTCAAGAAGATC 907
Query 729 CCAATCCCTAAAAGGGATTTTGTGTCACCGCCAAAGATGATAATCATTCGTTCTTTTGAT 788
||||||||| | ||| ||||||||||||| ||||| |||||| | ||||| |||||||||
Sbjct 908 CCAATCCCTGAGAGGAATTTTGTGTCACCCCCAAATATGATAGTGATTCGGTCTTTTGAT 967
Query 789 GTCAATAAACCTGGCTATGAGGTT-ACTGATATTAAAGGTGGAGTGGCAGGTGGAAGTAT 847
||||| |||||||| ||||||||| | ||| || ||||||||||| ||||||||||||||
Sbjct 968 GTCAACAAACCTGGTTATGAGGTTGA-TGAGATCAAAGGTGGAGTTGCAGGTGGAAGTAT 1026
Query 848 CTTCCGGGGTGTTTTGAAAGTAAACCAATTGATTGAGATCCGACCTGGTATCGTTAGCAA 907
| | ||||||||||||| ||| |||||||| || || ||||||||||||||||||| |||
Sbjct 1027 CCTACGGGGTGTTTTGAGAGTCAACCAATTAATCGAAATCCGACCTGGTATCGTTACCAA 1086
Query 908 AGATGAGCTTGGAAACCCAAGATGCTCTCCCATTTACTCCCGTATCACTTCATTGTACGC 967
||| |||| ||| ||| ||| |||| |||| |||||||| || |||| |||| | |||||
Sbjct 1087 AGACGAGCGTGGCAACTCAAAATGCACTCCAATTTACTCTCGCATCATTTCACTCTACGC 1146
Query 968 AGAACAGAACGAGCTTCAGTTTGCTGTGCCGGGAGGTCTGATCGGAGTTGGGACAACGAT 1027
|||||||||||||||||||||||||| || |||||||| || |||||||| ||||| ||
Sbjct 1147 GGAACAGAACGAGCTTCAGTTTGCTGTTCCTGGAGGTCTAATAGGAGTTGGAACAACAAT 1206
Query 1028 GGACCCTACGCTCACGCGTGCTGATAGGTTGGTTGGTCAAGTGCTTGGTGAAATGGGTTC 1087
|||||| || ||||| ||||| ||| | || ||||||||||| ||||||||||| |||||
Sbjct 1207 GGACCCAACTCTCACTCGTGCAGATCGATTAGTTGGTCAAGTCCTTGGTGAAATCGGTTC 1266
Query 1088 TCTCCCTGATGTCTATGTTGAGCTTGAGGTGAGTTTCCAGCTTCTGACC-CGTCTTATTG 1146
|| |||||||| | |||||| || ||||||| ||| ||||| || ||| || |||
Sbjct 1267 ACTTCCTGATGTATTTGTTGAACTCGAGGTGAACTTCTTTCTTCT-ACGACGT-TTGTTG 1324
Query 1147 GG-GTGAGGACAAAGGAAAAAGAGAAGCAGATG-AAAGTGGCAAAGCTAA-GCAAGGGAG 1203
|| ||||| ||||||| | |||||| || | | |||||| ||||||||| | |||| ||
Sbjct 1325 GGAGTGAGAACAAAGGGATCAGAGAAACA-AGGGAAAGTGTCAAAGCTAACGAAAGG-AG 1382
Query 1204 AGATACTGATGGTGAACATCGGGTCGATGTCGGCGGGAGCTAAGGTTCTAGGAGTGAA-G 1262
|||| |||||| | ||||| || |||||||| | ||||| || ||| ||||||| || |
Sbjct 1383 AGATTCTGATGCTCAACATTGGTTCGATGTCCACTGGAGCCAAAGTTGTAGGAGTTAAAG 1442
Query 1263 AAAGATATGA-TGAAAGTGCAACTGACAGTGCCTGTCTGCACCAACATAGGAGAGAAGGT 1321
||| || | ||| |||||||||| | |||||| || |||| || ||||||||| ||
Sbjct 1443 TC-GATCTGGCT-AAACTGCAACTGACTGCGCCTGTTTGTACCAGCAAAGGAGAGAAAGT 1500
Query 1322 GGCTCTAAGCCGCCGTGTCGACAGGCATTGGCGTTTGATTGGTCGTGGTCAGATTGAGGC 1381
|||||||||| | ||||| || | ||||||||||||||||||| | ||||||||| | ||
Sbjct 1501 GGCTCTAAGCAGACGTGTGGAAAAGCATTGGCGTTTGATTGGTTGGGGTCAGATTCAAGC 1560
Query 1382 TGGAACCACC 1391
||||||||||
Sbjct 1561 TGGAACCACC 1570
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71033771175
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5