BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924973 Length=364 Score E Sequences producing significant alignments: (Bits) Value AT1G60783.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 433 7e-121 > AT1G60783.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:22374909-22375846 FORWARD LENGTH=938 Length=938 Score = 433 bits (234), Expect = 7e-121 Identities = 312/350 (89%), Gaps = 3/350 (1%) Strand=Plus/Plus Query 1 TTAACTTCATACGATAACTTATGGGAGTTTCCGGCAAGACTCACCACCAGTTTGATGGAA 60 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||| Sbjct 245 TTAACTTCATACGATAACTTATGGGATTTTCCGGCAAGACTTACCACCAGTTTGACAGAA 304 Query 61 AATTTGGCGAAACTGTCGAAGGAAAGAAATGGGTCATCACAGGAATCTCCTTACGTTCTC 120 ||||| |||||||| |||||| |||||||| |||||||| ||||||||||||| |||| Sbjct 305 AATTTAGCGAAACTACCGAAGGGAAGAAATGCGTCATCACCGGAATCTCCTTACATTCTA 364 Query 121 CGAAGAAGCCGATTAGCTTCCCCTCCTCAGCCGTAGCTGACACGGAAGACGAAGATCTTT 180 || ||||||||||||| || | ||||| |||||| | ||||||||||||||||||| | Sbjct 365 CGGTGAAGCCGATTAGCCTCTCTTCCTCTGCCGTATCCAACACGGAAGACGAAGATCTCT 424 Query 181 GTCCAACGACTCCAACGGCTGCTTCCGTTAGAATACCGACGGTGTTTCCATGTCCTCCGG 240 |||||||||||||||| || | ||||||||||||||||||||| |||| |||||||||| Sbjct 425 GTCCAACGACTCCAACAGCGGATTCCGTTAGAATACCGACGGTAATTCCGTGTCCTCCGG 484 Query 241 CGCCTAAGAAACGGAAACCGTCATTGAAGTTTAGCTATGACGGCGCTAGAGAGTTCTTTT 300 |||||||||||||||||| | |||||||| ||||| | ||||| ||||||||||||||| Sbjct 485 CGCCTAAGAAACGGAAACTGACATTGAAGGTTAGC--T-ACGGCCCTAGAGAGTTCTTTT 541 Query 301 CTCCACCAGATCTCGAGACCGTCTTCATATACAGAACTACTTAATTCTGA 350 | |||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 542 CGCCACCAGATCTCGAGACCGTCTTCATATACAGAACTACTTGATTTTGA 591 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17091034660 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5