BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg925053
Length=1654
Score E
Sequences producing significant alignments: (Bits) Value
AT1G60030.1 | Symbols: ATNAT7, NAT7 | nucleobase-ascorbate tran... 2584 0.0
AT1G10540.1 | Symbols: ATNAT8, NAT8 | nucleobase-ascorbate tran... 1201 0.0
> AT1G60030.1 | Symbols: ATNAT7, NAT7 | nucleobase-ascorbate transporter
7 | chr1:22113841-22116845 REVERSE LENGTH=1966
Length=1966
Score = 2584 bits (1399), Expect = 0.0
Identities = 1573/1658 (95%), Gaps = 7/1658 (0%)
Strand=Plus/Plus
Query 1 TTCATCAGAAGTGAAAGGAAATGGCCGGTGGTGGT---GGAGGAGGAGGGATAGCGCCGC 57
|||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 178 TTCATCAGAAGTTAAAGGAAATGGCCGGTGGTGGTGGAGGAGGAGGAGGGGTAGCGCCGC 237
Query 58 CGCTAAAACAAGATGAGCTTGAGCCACATCCCGTGAAAGATCAACTTTCTTCTATCTCTT 117
|||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 238 CGCTAAAACATGATGGGCTTGAGCCACATCCGGTGAAAGATCAACTTTCTTCTATCTCTT 297
Query 118 ATTGCATCACAAGTCCTCCTCCTTGGCCGGAGGCAATACTTTTAGGTTTTCAGCATTACT 177
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 298 ATTGCATCACAAGTCCTCCTCCTTGGCCGGAGGCAATACTTTTGGGGTTTCAGCATTACT 357
Query 178 TGGTGATGCTTGGAACAACTGTTCTCATTCCAACATATTTAGTTCCACAGATGGGTGGTG 237
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 358 TAGTGATGCTTGGAACAACTGTTCTCATCCCAACATATTTAGTTCCACAGATGGGTGGTG 417
Query 238 GAAATGAAGAGAAGGCAAAGATGGTTCAGACATTGCTTTTTGTTTCTGGACTTAACACTT 297
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 418 GAAATGAAGAGAAGGCAAAGATGGTTCAGACATTACTTTTTGTTTCTGGACTTAATACTT 477
Query 298 TATTGCAAAGCTTCTTTGGGACTCGACTTCCCGCGGTCATTGGAGGCTCTTATACCTATT 357
|||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct 478 TATTGCAAAGTTTCTTTGGGACTAGACTTCCAGCGGTCATTGGAGGCTCTTACACCTATG 537
Query 358 TACCAACCACTCTTTCGATCATTTTGGCTGGTCGGTACAGTGACATTCTT-GATCCTCAG 416
|||||||||| ||||| ||||| ||||||||||||||||| |||||| || |||||||||
Sbjct 538 TACCAACCACGCTTTCCATCATCTTGGCTGGTCGGTACAGCGACATT-TTGGATCCTCAG 596
Query 417 GAGAAATTTAAGAGGATAATGCGAGGAATCCAGGGTGCTCTTATCGTTGCCTCGATTCTT 476
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 GAGAAATTTAAGAGGATCATGCGAGGAATCCAGGGTGCTCTTATCGTTGCCTCGATTCTT 656
Query 477 CAGATCGTTGTTGGCTTCAGCGGGCTTTGGCGCAATGTAGTTAGGCTCTTGAGTCCTCTC 536
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 657 CAGATCGTTGTTGGCTTCAGCGGGCTTTGGCGCAATGTAGTTAGGCTCCTGAGTCCTCTC 716
Query 537 TCTGCAGTTCCTCTAGTAGCACTAGCCGGTTTTGGACTTTATGAGCACGGTTTCCCTCTG 596
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 717 TCTGCAGTTCCTCTAGTAGCACTAGCTGGTTTTGGACTTTATGAGCACGGTTTCCCTCTG 776
Query 597 CTAGCCAAATGCATTGAGATTGGACTGCCTGAAATCATCCTTCTACT-TATATTCTCACA 655
|||||||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||
Sbjct 777 CTAGCCAAATGCATCGAGATTGGACTGCCTGAGATCATCCTTCTACTCT-TATTCTCACA 835
Query 656 GTACATTCCTCATCTCATTCGAGGAGAAAGACAAGTCTTTCATCGATTTGCTGTTATTTT 715
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 836 GTACATTCCTCATCTCATTCGAGGAGAAAGACAAGTCTTCCATCGATTTGCTGTGATTTT 895
Query 716 CTCTGTGGTTATCGTCTGGATTTACGCACATCTACTTACCGTTGGTGGAGCCTATAAGAA 775
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 896 CTCTGTGGTTATTGTCTGGATTTACGCGCATCTACTTACCGTTGGTGGAGCCTATAAGAA 955
Query 776 CACAGGAATCAACACTCAGACAAGTTGCAGAACAGATCGTTCCGGCCTTATTGGAGGCGC 835
||||||| ||||||||||||||||||| |||||||||||||| ||||||||| | ||| |
Sbjct 956 CACAGGAGTCAACACTCAGACAAGTTGTAGAACAGATCGTTCTGGCCTTATTAGCGGCTC 1015
Query 836 TCCATGGATAAGAGTGCCTTATCCTTTTCAATGGGGACCTCCAACATTTCATGCCGGTGA 895
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1016 TCCATGGATAAGAGTTCCTTACCCTTTTCAATGGGGACCTCCAACATTTCATGCCGGTGA 1075
Query 896 AGCTTTCGCTATGATGGCTGTTTCATTTGTTTCCCTTATTGAGTCCACAGGGACTTACAT 955
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1076 AGCTTTCGCTATGATGGCTGTTTCATTTGTTTCCCTAATTGAGTCCACAGGGACTTACAT 1135
Query 956 TGTTGTGTCAAGGTTTGCAAGCGCAACTCCACCGCCACCTTCTGTTCTTAGCCGTGGAAT 1015
||||||||| ||||| |||||||||||||| || || ||||| ||||| |||||||| |
Sbjct 1136 TGTTGTGTCGAGGTTCGCAAGCGCAACTCCGCCCCCGCCTTCCGTTCTCAGCCGTGGGGT 1195
Query 1016 CGGTTGGCAGGGCGTTGGAGTACTTCTCTGTGGATTATTTGGAGCAGGAAATGGAGCATC 1075
||||||||||| || ||||| |||||||||||| |||||||||||||||||||||||||
Sbjct 1196 TGGTTGGCAGGGTGTAGGAGTTCTTCTCTGTGGACTATTTGGAGCAGGAAATGGAGCATC 1255
Query 1076 TGTATCAGTAGAAAATGCCGGTTTGTTAGCGCTAACACGCGTTGGTAGCAGAAGGGTAGT 1135
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1256 TGTGTCAGTAGAAAATGCCGGTTTGTTAGCGCTAACACGCGTTGGTAGTAGAAGGGTAGT 1315
Query 1136 TCAAATATCAGCTGGTTTCATGATTTTCTTCTCCATTCTTGGTAAATTTGGGGCCATCTT 1195
|||||||||||| ||||| ||||||||||| |||||||||||||||||||| || |||||
Sbjct 1316 TCAAATATCAGCCGGTTTTATGATTTTCTTTTCCATTCTTGGTAAATTTGGAGCTATCTT 1375
Query 1196 TGCTTCGATTCCCGCTCCAATCGTCGCAGCATTACATTGCTTGTTCTTTGCATACGTTGG 1255
|||||||||||| |||||| | ||||||||||||||||||||||| ||||||||||||||
Sbjct 1376 TGCTTCGATTCCAGCTCCAGTAGTCGCAGCATTACATTGCTTGTTTTTTGCATACGTTGG 1435
Query 1256 TGCTGGTGGTCTAAGCTTACTTCAGTTCTGTAATCTAAACAGCTTCAGAACAAAATTCAT 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1436 TGCTGGTGGTCTAAGCTTACTTCAGTTCTGTAATCTAAACAGCTTCAGAACAAAATTCAT 1495
Query 1316 CCTCGGATTCTCGGTCTTCATGGGCTTATCGATACCACAGTACTTCAACGAGTATACAGC 1375
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1496 CCTCGGATTCTCGGTCTTCATGGGCTTATCGATACCACAGTACTTCAACCAGTATACAGC 1555
Query 1376 TGTTAACAAGTATGGACCAGTTCACACACACGCAAGATGGTTCAATGATATGATCAATGT 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1556 TGTTAACAAGTATGGACCAGTTCACACACACGCAAGATGGTTCAATGATATGATCAATGT 1615
Query 1436 ACCATTCTCCTCTAAAGCATTTGTGGCTGGGATTTTGGCATTCTTTCTTGATGTAACATT 1495
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 1616 TCCATTCTCTTCTAAAGCCTTTGTGGCTGGGATTTTGGCATTCTTTCTTGATGTAACAAT 1675
Query 1496 GTCATCTAAAGACAGTGCCACAAGGAAAGACCGAGGGATGTTTTGGTGGGATCGTTTTAT 1555
|||||||||||||||||| || |||||||||||||||||||||||||||||||| || ||
Sbjct 1676 GTCATCTAAAGACAGTGCGACGAGGAAAGACCGAGGGATGTTTTGGTGGGATCGATTCAT 1735
Query 1556 GTCTTTTAAATCGGATACTAGAAGTGAAGAGTTTTACTCTTTGCCTTTCAATCTCAACAA 1615
||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1736 GTCGTTCAAATCAGATACTAGAAGTGAAGAGTTTTACTCTTTGCCTTTCAATCTCAACAA 1795
Query 1616 GTATTTTCCCTCTGTGTAAACATTGAAAATTATGCTGA 1653
||||||||||||||||| | || |||||||||||||||
Sbjct 1796 GTATTTTCCCTCTGTGTGATCAATGAAAATTATGCTGA 1833
> AT1G10540.1 | Symbols: ATNAT8, NAT8 | nucleobase-ascorbate transporter
8 | chr1:3474864-3477927 REVERSE LENGTH=1951
Length=1951
Score = 1201 bits (650), Expect = 0.0
Identities = 1307/1617 (81%), Gaps = 73/1617 (5%)
Strand=Plus/Plus
Query 53 GCCGCCGCTA-AAACAAGATGAGCTTGAGCCACATCCCGTGAAAGATCAACTTT-CTTCT 110
||| |||| | ||||| || || ||| |||| ||||| ||||| |||||||||| | |
Sbjct 201 GCCACCGC-AGAAACAGGAAGATCTTCAGCCTCATCCGGTGAAGGATCAACTTTAC-GGT 258
Query 111 ATCTCTTATTGCATCACAAGTCCTCCTCCTTGGCCGGAGGCAATACTTTTAGGTTTTCAG 170
||| |||| ||| |||||||||||||||||||||||||| |||||||| | || |||||
Sbjct 259 ATCACTTACTGCCTCACAAGTCCTCCTCCTTGGCCGGAGACAATACTTCTGGGGTTTCAA 318
Query 171 CATTACTTGGTGATGCTTGGAACAACTGTTCTCATTCCAACATAT-TTAGTTCCACAGAT 229
|| ||||| ||||||||||||||||||||||||||||||||| || |||||| || ||||
Sbjct 319 CACTACTTAGTGATGCTTGGAACAACTGTTCTCATTCCAACA-ATGTTAGTTTCAAAGAT 377
Query 230 GGGTGGTGGAAATGAAGAGAAGGCAAAGATGGTTCAGACATTGCTTTTTGTTTCTGGACT 289
| || |||| ||||| |||| |||| || ||||||| ||||| ||||| |||||| |
Sbjct 378 TGATGCAAGAAACGAAGATAAGGTAAAGTTGATTCAGACGTTGCTCTTTGTGTCTGGAAT 437
Query 290 TAACACTTTATTGCAAAGCTTCTTTGGGACTCGACTTCCCGCGGTCATTGGAGGCT-CTT 348
||||| ||||| |||||||||||||||||||| ||||| || |||||||||| || |||
Sbjct 438 CAACACGTTATTTCAAAGCTTCTTTGGGACTCGTCTTCCTGCTGTCATTGGAG-CTTCTT 496
Query 349 A-TACCTATTTACCAACCACTCTTTCGATCATTTTGGCTGGTCGGTACAGTGACATTCTT 407
| | | ||| | ||||| || | || ||| | || |||| ||| |||| ||||||| |
Sbjct 497 ACT-CTTATGTGCCAACTACAATGTCAATCGTCTTAGCTGCTCGTTACAATGACATTATG 555
Query 408 GATCCTCAGGAGAAATTT-AAGAGGATAATGCGAGGAATCCAGGGTGCTCTTATCGTTGC 466
|||||||| ||| |||| || || || ||||| |||||||| ||||||||||| ||||
Sbjct 556 GATCCTCAAAAGAGATTTGAACAG-ATCATGCGTGGAATCCAAGGTGCTCTTATTATTGC 614
Query 467 CTCGATT-CTTCAGATCGTTGTTGGCTTCAGCGGGCTTTGGCGCAATGT-AGTTAGGCTC 524
||| ||| ||||| ||| ||||||| ||||| || |||||||||||||| | | ||| |
Sbjct 615 CTC-ATTTCTTCATATCCTTGTTGGTTTCAGTGGCCTTTGGCGCAATGTTACT-AGGTTT 672
Query 525 TTGAGTCCTCTC-TCTGCAGTTCCTCTAGTAGCACTAGCC-GGTTTTGGACTTTATGAGC 582
|||||||| || |||||||||||||| ||||| || | || |||||||| ||||| |
Sbjct 673 TTGAGTCC-CTTATCTGCAGTTCCTCTTGTAGC-CTTTTCTGGCTTTGGACTCTATGAAC 730
Query 583 ACGGTTTCCCTCTGCTAGCCAAATGCATTGAGATTGGACTGCCTGAAATCATCCTTCTAC 642
| || |||||| ||||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct 731 AAGGATTCCCTATGCTAGCAAAATGCATTGAGATTGGACTGCCTGAGATCATACTTCTTG 790
Query 643 TTATATTCTCACAGTACATTCCTCATCTCATTCGAGGAGAAAGA----C-AAGT-CTTTC 696
| |||||||||||||||||||||||||| || | |||||||| | | || | ||| |
Sbjct 791 TCATATTCTCACAGTACATTCCTCATCTGATGCAAGGAGAAACATGTTCTAACTTCTTCC 850
Query 697 ATCGATTTGCTGTTATTTTCTCTGTGGTTATCGTCTGGATTTACGCA--CATCTACTTAC 754
| ||||||||||| || ||||| ||||| || || ||| |||| ||| ||| | || ||
Sbjct 851 ACCGATTTGCTGTGATATTCTCAGTGGTGATTGTGTGGCTTTATGCATACAT-T-CTAAC 908
Query 755 CGTTGGTGGAGCCTATAAG-AACACAGGAATCAACACTCAGA-CAAGTTGCAGAACAGAT 812
| ||||||| || |||| | ||||||| |||||| ||||| | || |||||||||| ||
Sbjct 909 CATTGGTGGGGCTTATA-GTAACACAGAAATCAATACTCAAATCA-GTTGCAGAACCGAC 966
Query 813 CGTTCCGGCCTTATTGGAGGCG-CTCCATGGATAAGAGTGCCTTATCCTTTTCAATGGGG 871
||| | ||| | ||| | | | |||||||||| ||||||||| | ||| ||||||||||
Sbjct 967 CGTGCTGGCATCATTAGCG-CTTCTCCATGGATTAGAGTGCCTCACCCTATTCAATGGGG 1025
Query 872 AC---CTCCAACATTTCA-TGCCGGTGA-AGCTTTCGCTATGATGGCTGTTTCATTT-GT 925
| ||||||| ||||| ||| || || | ||| ||||||||||||| ||| ||| ||
Sbjct 1026 AGGAGCTCCAAC-TTTCAATGCAGGGGATATTTTT-GCTATGATGGCTGCTTC-TTTCGT 1082
Query 926 TTCCCTTATTGAGTCCACAGGGACTTACATTGTTGTGTCAAGGTTTGCAAGCGCAACTCC 985
||| ||| | ||||| |||||||| ||||||| ||| || || | |||||| ||||| ||
Sbjct 1083 TTCTCTTGTCGAGTCTACAGGGACATACATTGCTGTATCGAGATATGCAAGTGCAACACC 1142
Query 986 AC-CGCCACCTTCTGTTCTTAGCCGTGGAATCGGTTGGCAGGGCGTTGGAGTACTTCTCT 1044
| | ||||||||||| ||||| |||||||||||||||||||| ||||| | |||||||
Sbjct 1143 AATC-CCACCTTCTGTGCTTAGTCGTGGAATCGGTTGGCAGGGATTTGGAATTCTTCTCT 1201
Query 1045 GTGGATTATTTGGAGCAGGAAATGGAGCATCTGTATCAGTAGAAAATGCCGGTTTGTTAG 1104
|||||||||||||||||||||||| | |||| || || ||||| |||||||| ||||| |
Sbjct 1202 GTGGATTATTTGGAGCAGGAAATGCAACATCCGTGTCTGTAGAGAATGCCGGCTTGTTGG 1261
Query 1105 C-GCTAACACGCGTTGGTAGCAGAAGGGTAGTTCAAATATCAGCTGGTTTCATGATTTTC 1163
| | |||||||||||||||| ||| | ||| ||||| || ||||||| |||||||| |||
Sbjct 1262 CTG-TAACACGCGTTGGTAGTAGACGTGTAATTCAAGTAGCAGCTGGATTCATGATCTTC 1320
Query 1164 TTCTCCATTCTTGGTAAATTTGGGGCCATCTTTGCTTCGATTCCCGCTCCAATCGTCGCA 1223
|||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct 1321 TTCTCCATTCTTGGTAAATTTGGGGCTATCTTTGCTTCGATTCCAGCTCCTATCGTCGCA 1380
Query 1224 GCA-TT-ACATTGCTTGTTCTT-TGCATACGTTGGTGCTGGTGGTCTAAG-CTTACTTCA 1279
|| || || | | |||||||| | ||||||||||||||||||||||||| || | | ||
Sbjct 1381 GCTCTTTAC-T-GTTTGTTCTTCT-CATACGTTGGTGCTGGTGGTCTAAGTCTAA-TCCA 1436
Query 1280 GTTCTGTAATCTAAACAGCTTCAGAACAAAATTCATCCTCGGATTCTCGGTCTTCATGGG 1339
|||||| ||||| ||||| |||||||| || ||||| || |||||||| ||||||||||
Sbjct 1437 GTTCTGCAATCTGAACAGTTTCAGAACTAAGTTCATTCTTGGATTCTCCATCTTCATGGG 1496
Query 1340 CTTATCGATACCACAGTACTTCAACGAGTATACAGCTGTTA-ACAAG-TATGGACCAGTT 1397
|||||| ||||| || ||||| || |||| ||| || || | || |||||||| |||
Sbjct 1497 CTTATCCATACCTCAATACTTTTACCAGTACACAACT-TTGGA-AACCTATGGACCCGTT 1554
Query 1398 CACACA-CACGCAAGATGGTTCAATGATATGATCAATGTACCATTCTCCTCTAAAGCATT 1456
| ||| | ||||| ||||||||| | || || || || || ||||| |||||||||||
Sbjct 1555 CGGACATC-CGCAACATGGTTCAACAACATTATAAACGTTCCTTTCTCATCTAAAGCATT 1613
Query 1457 TGTGGCTGGGATTTTGGCATTCTTTCTTGATGTAACATTGTCATCTAAAG-ACAGTGCC- 1514
||| | ||||||||||| |||||||| || |||||| | || |||| ||| | |
Sbjct 1614 TGTTTCCGGGATTTTGGCCTTCTTTCTAGACACGACATTGCC-TCCAAAGGACAA-GACG 1671
Query 1515 ACAAGGAAAGACCGAGGGA-T-GTTTTGGTGGGATCGTTTTATGTCTTTTAAATCGGATA 1572
|||| |||||| ||||| | | |||| ||||| | || |||| || || |||| ||||
Sbjct 1672 ACAAAGAAAGATCGAGG-ACTAGTTT-GGTGGAAGCGATTTAAATCGTTCCAATCTGATA 1729
Query 1573 -CTAGAAGTGAAGAGTTTTACTCTTTGCCTTTCAATCTCAACAAGTATTTTCCCTCT 1628
| ||||| |||||||| |||||||||||| ||||||||| |||||| ||||| |||
Sbjct 1730 AC-AGAAGCGAAGAGTTCTACTCTTTGCCTCTCAATCTCAGCAAGTACTTTCCTTCT 1785
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81726487260
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5