BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925072 Length=205 Score E Sequences producing significant alignments: (Bits) Value AT1G27150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 159 7e-39 AT3G44620.2 | Symbols: | protein tyrosine phosphatases;protein... 104 3e-22 > AT1G27150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:9429047-9432274 FORWARD LENGTH=1743 Length=1743 Score = 159 bits (86), Expect = 7e-39 Identities = 95/99 (96%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 87 TTGTGTCATGTTCTTCAACATGAATGTCGGTTTAAAGAAGCAGTGGAGTTCATGGAAGCA 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 722 TTGTGTCATGTTCTTCAACATGAATGTCGGTTTAAAGAAGCAGTGGAGTTCATGGAAGCA 781 Query 147 CTCGCAG-AATCGTGGCCTTCTTGCTCATCCTTCATGTA 184 ||||||| || | ||||| |||||||||||||||||||| Sbjct 782 CTCGCAGGAA-CTTGGCCCTCTTGCTCATCCTTCATGTA 819 > AT3G44620.2 | Symbols: | protein tyrosine phosphatases;protein tyrosine phosphatases | chr3:16193829-16195833 FORWARD LENGTH=1229 Length=1229 Score = 104 bits (56), Expect = 3e-22 Identities = 66/71 (93%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 16 ATATCGTGAAGAAGAGAGGTCTCGATTCCAATTTCATCATTGATTCGGCTGGAACCATTG 75 ||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| |||| Sbjct 325 ATATCGTGAAGAAGAGAGGTCTCGATTCCAAATTCAACATTGATTCCGCTGGAACAATTG 384 Query 76 ATTATCATGAG 86 ||||||| ||| Sbjct 385 ATTATCACGAG 395 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9154845882 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5