BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg925075
Length=3500
Score E
Sequences producing significant alignments: (Bits) Value
AT1G59890.2 | Symbols: SNL5 | SIN3-like 5 | chr1:22043829-22051... 1720 0.0
AT1G10450.1 | Symbols: SNL6 | SIN3-like 6 | chr1:3431780-343837... 490 4e-137
AT4G12020.2 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | prot... 274 4e-72
> AT1G59890.2 | Symbols: SNL5 | SIN3-like 5 | chr1:22043829-22051086
FORWARD LENGTH=4199
Length=4199
Score = 1720 bits (931), Expect = 0.0
Identities = 1265/1419 (89%), Gaps = 51/1419 (4%)
Strand=Plus/Plus
Query 1150 AGATGCATTGAGCGGTTATACGGGGATTATGGGCTTGATGTCGTGGATTTTTTGAAGAAG 1209
||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1662 AGATGCATTGAGCGGTTGTACGGGGATTATGGGCTTGATGTCATGGATTTTCTGAAGAAG 1721
Query 1210 AGTTCTCATACT-GCCTTACCGGTGATACTAACACGCTTGAAGCAAAAACAAAAAGAATG 1268
| |||||||| | |||||||| ||||| ||||||||||||||||| |||||| |||||||
Sbjct 1722 AATTCTCATA-TCGCCTTACCTGTGATTCTAACACGCTTGAAGCAGAAACAAGAAGAATG 1780
Query 1269 GGCTAGGTGTCGCTCTGATTTCAGGAAAGTATGGGCTGAAGTATATGCTAAGAATCATCA 1328
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1781 GGCTAGGTGTCGCGCTGATTTCAGGAAAGTATGGGCTGAAGTATATGCTAAGAATCATCA 1840
Query 1329 AAAATCACTCGATCATCGTAGTTTCTATTTCAAGCAGCAGGACTCCAAGAATTTGAGCAC 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1841 CAAATCACTCGATCATCGTAGTTTCTATTTCAAGCAGCAGGACTCCAAGAATTTAAGCAC 1900
Query 1389 AAAAGGTTTAGTGGCGGAAATTAAAGATATCAGCGAGAGGAAGCATAAAGAAGACCTTAT 1448
|||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |
Sbjct 1901 AAAAGGTTTAGTGGCGGAGATTAAAGATATCAGTGAGAGAAAGCATAAAGAAGACCTGCT 1960
Query 1449 TCGTGCCGTTGCTGTTGGAAATAAACCCGCTTTCACCCCAGATATGGAGTTTAGTTATAC 1508
||||||| |||||||||||| ||| ||| |||||||||||||| ||||||| | ||||||
Sbjct 1961 TCGTGCCATTGCTGTTGGAACTAAGCCCTCTTTCACCCCAGATGTGGAGTTCATTTATAC 2020
Query 1509 TGATACACAAGTTCATACTGACCTATATCAA-CTAATCAAGTATTATTGTGAAGAAATAT 1567
||||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct 2021 TGATACAAAAGTTCATACTGACCTATAT-AAGCTAATCAAGTATTATTGTGAGGAAATAT 2079
Query 1568 ATGCTACTGAACAGGCGGATAAAGTCATGGAGCTGTGGGTAACTTTTTTGGAACCAATGC 1627
||||||||||||| |||||||||| ||| |||| |||||||| |||||||| || |||
Sbjct 2080 GTGCTACTGAACAGTCGGATAAAGTAATGAAGCTATGGGTAACCTTTTTGGAGCCCATGT 2139
Query 1628 TTGGTGTTCCTTCTAGGTCTCAAACTAATGAGACAATGAAGGATGTTGCAAATATCGAAG 1687
|||| ||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||
Sbjct 2140 TTGGCGTTCCTTCTAGGTCTGAAACTATTGAGACAATGAAAGATGTTGCAAAGATCGAAG 2199
Query 1688 ACAACCAAGCGCACCATGATGCATGTGAGGCAGTGAAGGAAAACACATGTGACGGTTCTT 1747
||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 2200 ACAACCAAGAGCACCATGATGCAAGTGAGGCAGTGAAGGAAAATACATGTGACGGTTCTA 2259
Query 1748 TGGCCTTAAACCTTAAACCGTTAACACCTCCAAAA-TCGCCTAACAAAGAAAACCCAAT- 1805
|||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 2260 TGGCCTCAAACCTTAAACCGTTAACACCTCCAAAAAT-GCCTAACAAAGAAAACCCAATG 2318
Query 1806 ATTACAAGGAAGCTCTTTTCCGCAAGATATCCCACTCAATACACTAGAAAGCATTCATCA 1865
|| |||||||||||||||| |||||||| | ||| |||| ||| |||||||||||| ||
Sbjct 2319 AT-ACAAGGAAGCTCTTTTGCGCAAGATTTGCCAGTCAACACAGGAGAAAGCATTCAGCA 2377
Query 1866 AGATAAAATGCATGATGGTGCAACTATAACTAATGAGGTTCTGCAGGATAGCCAGCCTTC 1925
||||||| ||||||||| |||| ||||||||||||||| | ||||||||||||
Sbjct 2378 AGATAAACTGCATGATGTTGCAGCTATAACTAATGAGG------A---TAGCCAGCCTTC 2428
Query 1926 CAAACTGGTGTCACCCAGAAATGATATGATAATGAAGGGTGTAGAGAATTGTAGTAAGGT 1985
||||||||||||| ||||||| ||| |||||||| |||||||||||||| |||||| |||
Sbjct 2429 CAAACTGGTGTCAACCAGAAACGATTTGATAATGGAGGGTGTAGAGAATCGTAGTAGGGT 2488
Query 1986 TAGTGATGTATCAATGGGAGAGCATAAGGTCGAGCGTGAAGAGGGTGAATTATCTCCCAC 2045
||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||
Sbjct 2489 CAGTGATGTATCAATGGGAGGGCATAAGGTCGAGCGAGAAGAGGGTGAATTATCCCCCAC 2548
Query 2046 TGAAATTTTCGAGCACGAAAATATT-GAGGTTTATAAAGAGAATGGGCTCGAGCCTGTAC 2104
||||| || |||||| |||||| || |||||||||||||||||||||||||||||||| |
Sbjct 2549 TGAAAGTTGCGAGCAAGAAAAT-TTCGAGGTTTATAAAGAGAATGGGCTCGAGCCTGTGC 2607
Query 2105 AGAAACTGCCAGACAATGAAATAAGTAATAAAGATCGAGAATACAAAGAGGGTGCATATG 2164
||||||| ||||| |||||||||||||||| ||| |||||| |||||||||||||| ||
Sbjct 2608 AGAAACTACCAGATAATGAAATAAGTAATACAGACCGAGAACCCAAAGAGGGTGCATGTG 2667
Query 2165 GTACTGAAGCTGGAGCAAGAAGCAATATCAAACCTGAAGATGATGAAAATAAAATTACTC 2224
|||||||||||| | |||| |||||| | |||||||||||||| |||||||| ||||
Sbjct 2668 GTACTGAAGCTGTAACAAGGAGCAATGCCCTCCCTGAAGATGATGATAATAAAATAACTC 2727
Query 2225 AAAAGTTATCAGAAGGGGAAGAAAATGCCTCTAAAATTATTGTCTCAACAAGCAAGTTTG 2284
||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||
Sbjct 2728 AAAAGTTATCAGAAGGGGATGAAAATGCCTCGAAATTTATTGTCTCAGCAAGCAAGTTTG 2787
Query 2285 GTGGCCAAGTTTCTTCCGATGAAGAGCATAAAGGAGCTATGAACTGTGACCGGCGTGATA 2344
|||||||||||||||||||||||||||||||||||||| || | | | ||| |
Sbjct 2788 GTGGCCAAGTTTCTTCCGATGAAGAGCATAAAGGAGCT--GA---G--A--G---TGAAA 2835
Query 2345 GTGTGGCTGAGAGTGAAAACGAGGCTGGAGGGATGGTTAATTCTAACGAGGTTGAAGATG 2404
|| ||||| ||| | || ||| | | ||||| ||||||| ||||||||
Sbjct 2836 ATGAGGCTG-GAG-G-----GA---TGG-----T--T-AATTCCAACGAGGGTGAAGATG 2877
Query 2405 GATC-TTTTGTCACATTTTCAGAACGGGATCTGCAACGTGTAAAGCCCCTTGCAAAGCAT 2463
|||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 2878 GATCCTTTT-TCACATTTTCAGAACGGTATCTGCAACCTGTAAAGCCCCTTGCAAAGCAT 2936
Query 2464 GTGCCTGGGACACTGCAAGCAAGTGAATGTGACTCCCGGAATGATTCTCGAGTTTTCTAT 2523
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 2937 GTGCCTGGGACACTGCAAGCAAGTGAATGCGACACCCGGAATGATTCTCGAGTTTTCTAT 2996
Query 2524 GGGAATGACTCATTTTATATGCTTTTTAGGCTTCATCAA 2562
|||||||| ||| | ||| ||||||||||||||||||||
Sbjct 2997 GGGAATGATTCACTCTATGTGCTTTTTAGGCTTCATCAA 3035
Score = 1605 bits (869), Expect = 0.0
Identities = 1072/1165 (92%), Gaps = 33/1165 (3%)
Strand=Plus/Plus
Query 17 AAGAGATGAAGAGGGTTAGAGATGAGGTTTACGTTG-ACGGACAGATACGAGCACCTACT 75
|||||||||||||||||||||| ||||||||||||| || ||| || |||| |||||||
Sbjct 361 AAGAGATGAAGAGGGTTAGAGAAGAGGTTTACGTTGAAC-CACAAATGCGAGGACCTACT 419
Query 76 GTTTCCTCTCGAGGAGAAACAAATGGAAGGCCTTTAACGATTGGTGGAGGAGGAACTACG 135
|||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||| |||
Sbjct 420 GTTTCCTCTCGAGGAGAAACAAATGGTAGGCCTTCAACGATTAGTGGCGGAGGAACAACG 479
Query 136 GGAGCGCTAACAACAGATGCTGCTTTGACATATCTCAAAGCTGTGAAGGATATGTTTCAC 195
|||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||||
Sbjct 480 GGAGGGCTAACAACAGTTGATGCTTTGACATATCTTAAAGCTGTGAAGGATATGTTTCAA 539
Query 196 GACAATAAAGAAAAATATGAGACTTTCCTTGGAGTCATGAAGGACTTCAAAGCTCAGAGA 255
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 GACAACAAAGAGAAATATGAGACTTTCCTTGGAGTCATGAAGGACTTCAAAGCTCAGAGA 599
Query 256 GTTGACACTAATGGCGTCATAACAAGAATCAAAGATTTGTTCAAGGGCTATGACGACTTA 315
||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||
Sbjct 600 GTTGACACTAATGGCGTCATAGCAAGAGTAAAAGATTTGTTCAAGGGCTATGACGACTTA 659
Query 316 CTTTTGGGTTTTAATACCTTCTTGCCGAAGGGGTACCAAATTACCCTTCAGCCCGAGGAT 375
||||||||||||||||||||||| || ||||||||| |||||||||||||||| ||||||
Sbjct 660 CTTTTGGGTTTTAATACCTTCTTACCTAAGGGGTACAAAATTACCCTTCAGCCTGAGGAT 719
Query 376 GAGAAACCTAAGAAGCCAGTGGATTTCCAAGTAGCTATCGAATTTGTCAATAAGATTAAG 435
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 720 GAGAAACCTAAGAAGCCAGTGGATTTCCAAGTAGCTATCGAATTTGTCAACAGGATTAAG 779
Query 436 GCGCGATTTGGAGGTGATGAACGTGCATATAAAAAATTCCTAGACATCTTGAACATGTAT 495
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 780 GCGCGATTTGGAGGTGATGACCGTGCATATAAAAAATTTCTAGACATCTTGAACATGTAT 839
Query 496 AGAAAGCAAACCAAGTCCATCAACGAGGTCTATCAAGAGGTTACTCTGTTGTTCCAGGAC 555
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 AGAAAGGAAACCAAGTCCATCAACGAGGTCTATCAAGAGGTTACTCTGTTGTTCCAGGAC 899
Query 556 CATGAAGATCTGCTCGGAGAGTTTTTTCATTTCTTACCTGATTTTCGAGGATCAGTTTCT 615
||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||
Sbjct 900 CATGAAGATCTGCTCGGGGAGTTTGTTCATTTCTTACCAGATTTTCGAGGATCAGTTTCT 959
Query 616 GTTAATAACCCTCTTTT-CAGAAGGAATACAGTACCGCATGATAGAAATTC-ACCATTTC 673
|||||| |||||||||| ||| ||||| ||| |||||| |||||||||||| | ||||||
Sbjct 960 GTTAATGACCCTCTTTTCCAG-AGGAACACAATACCGCGTGATAGAAATTCTA-CATTTC 1017
Query 674 ATGCCATGCATCCAAAGCATTATGAGAAGAAAATAAAACGGAGTAAGCATGATGAGTATA 733
|| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1018 CTGGCATGCATCCAAAGCATTTTGAGAAGAAAATAAAACGGAGTAGGCATGATGAGTATA 1077
Query 734 CTGAACTCTCTGATCAACGAGAAGATGGTGATGAGAACCTTGTGGCCTACTCTGCTGGTA 793
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1078 CTGAACTCTCTGATCAACGAGAGGATGGTGATGAGAACCTTGTGGCCTACTCTGCTGGTA 1137
Query 794 ATTCTCTGGGAAAATCCCTTGCTAATCATGGTCAATGGCCAGGATATCCTAAGGTAGAGG 853
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1138 ATTCTCTGGGAAAATCCCTTGCTAATCAAGGTCAATGGCCAGGATATCCTAAGGTAGAGG 1197
Query 854 ACACCGAGGGG------ATTCA--AAA-T---------TATG-AA-A-AT--A-AC--GG 887
||||||||||| ||| | ||| | ||| || | || | || |
Sbjct 1198 ACACCGAGGGGATTCAAATTTATGAAAGTAACGGGGGCCATGAAAGAGATCCAGACATCG 1257
Query 888 GGATTC-AAAAAATCTGCTGTCTACCAACCATATGGCCAAGGCAATAAATGAATTGGATC 946
| | || ||||||||| |||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 1258 GAAGTCAAAAAAATCTACTGTCTACAAACCATATGGCCAAGGCAATAAATGAACTGGATC 1317
Query 947 TTGCTGGCTGCGCACAATGTACACCAAGTTATCGTCGCCTGCCAGATGATTATCCCATTC 1006
|| ||| ||| ||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 1318 TTACTGACTGTGCACAATGTACACCAAGTTATCGTCGCTTGCCAGATGATTATCCTATTC 1377
Query 1007 ATATTCCAAGCTACAGAAATTCACTTGGTGAAAAGGTACTTAATGATCATTGGGTATCTG 1066
| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1378 AGATTCCAAGCTACAGAAATTCACTTGGTGAAAAGGTGCTTAACGATCATTGGGTATCTG 1437
Query 1067 TGACATCGGGGAGTGAGGATTACTCATTCAAACACATGCGCAAAAACCAGTATGAAGAAA 1126
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1438 TCACATCGGGGAGTGAGGATTACTCATTCAAACACATGCGCAAAAATCAGTATGAAGAAA 1497
Query 1127 GCTTGTTTCGATGTGAGGATGATAG 1151
|||||||||||||||||||||||||
Sbjct 1498 GCTTGTTTCGATGTGAGGATGATAG 1522
Score = 1262 bits (683), Expect = 0.0
Identities = 795/849 (94%), Gaps = 8/849 (1%)
Strand=Plus/Plus
Query 2650 TTGTACGAGAGAATACAATTAGCAAAGATACATTCAGAGAGGAAATCGAAAGCTCCAGAT 2709
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 3039 TTGTACGAGAGAATACAATCAGCAAAGATACATTCAGAGAGGAAATGGAAAGCTCCAGAT 3098
Query 2710 AGCACATCTACTGATTCTTATACCAGGTTCATGGATGCCCTTTATAATTTACTTGATGGC 2769
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 3099 AGCACATCTACTGATTCTTATACCAGGTTCATGGAAGCCCTTTACAATTTACTTGATGGC 3158
Query 2770 TCTAGCGACAATACAAAGTTTGAAGATGAATGCCGAGCTATTATTGGAGCACAGTCATAT 2829
|||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct 3159 TCTAGCGACAATACAAAGTTTGAAGATGAATGTCGAGCTATTATCGGAGCACAATCATAT 3218
Query 2830 GTTCTCTTCACATTGGACAAGCTAGTTCAAAAGTTTGTTAAGCATCTTCATGCAGTCGCA 2889
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3219 GTTCTCTTCACATTGGACAAGCTAGTTCAAAAGTTTGTTAAGCATCTTCACGCAGTCGCA 3278
Query 2890 GCGGATGAGACAGACACCAAGCTTCTGCAACTATATGCATACGAGAACTATAGAAAACCT 2949
|| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 3279 GCTGATGAGACAGACACCAAGCTTCTGCAGCTATATGCATACGAGAACTACAGAAAACCA 3338
Query 2950 GGAAGATTCTTTGATATGGTGTACCATGAGAATGCTCGAGCCCTTCTCCATGATCAGAAC 3009
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3339 GGAAGATTCTTTGATATAGTGTACCATGAGAATGCTCGAGCCCTTCTCCATGATCAGAAC 3398
Query 3010 ATATACAGAATTGAATATTCATCTGCCCAAACCCGTCTCTCGA-TTCAACTTATGAACAG 3068
|||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 3399 ATATACAGGATTGAATATTCATCTGCCCAAACCCGTCTCG-GAATTCAACTTATGAACAG 3457
Query 3069 AGGGAATGATAAGCCTGAAGTTACAGCTGTAACAGTGGAACCAGGTTTTGCTAATTATCT 3128
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3458 CTGGAATGATCAGCCTGAAGTTACAGCTGTAACAGTGGAACCAGGTTTTGCTAATTATCT 3517
Query 3129 ACAGAATGACTTTCTCTCGTTTGTCAGTGATGAAGAGAAACCCGGACTATTTCTGAAGAG 3188
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3518 GCAGAATGACTTTCTTTCGTTTGTCAGTGATGAAGAGAAACCCGGACTATTTCTGAAAAG 3577
Query 3189 GAACAAGGCGAAATTAAGCGGTCCGGGTGATGAATCT-TCAGGGACGTCGCGTGCAATGG 3247
||||||||| |||||||| ||||||||||| |||||| | ||||| ||| ||||| |||
Sbjct 3578 GAACAAGGCAAAATTAAGTGGTCCGGGTGAAGAATCTCT-AGGGATGTCACGTGCCTTGG 3636
Query 3248 ACGGACTAAAAATTATCAATGAGGTCGAATGTAAGATAGATTGCAGTTCTTTCAAGGTCC 3307
| ||| | || |||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 3637 AAGGATTGAACATTATCAATGAGGTTGAATGTAAGATAGCTTGCAGTTCTTTCAAGGTCA 3696
Query 3308 AGTATGAACCAAACACAACAGATATTTTATATAGAAGAAAGCAGAAGAAAGCAATACTGA 3367
||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||||
Sbjct 3697 AGTATGAACCACACACAGCAGATCTTTTATATAGAAGAAAGCAGAAGAAAGCAACACTGA 3756
Query 3368 ATCCAACTGGGCCTGAAAATGTTAAAACTTCTGATAGTATTGAACTCTCGAGAAAGGAAA 3427
|||||||||| ||||||||||||||||| |||||||||| |||||||||||||||| |||
Sbjct 3757 ATCCAACTGGACCTGAAAATGTTAAAACCTCTGATAGTAGTGAACTCTCGAGAAAG-AAA 3815
Query 3428 -GAATATCGCGCTTTCACAAGAGTCTTAACCGCAGACTTGTTGCTTTGCCTTAA-TGCAA 3485
|||||||||||||||||| ||||||||||||||||||||| || ||||||||| | |||
Sbjct 3816 CGAATATCGCGCTTTCACATGAGTCTTAACCGCAGACTTGTCGCCTTGCCTTAACT-CAA 3874
Query 3486 GAACGTCGT 3494
||||| |||
Sbjct 3875 GAACGCCGT 3883
> AT1G10450.1 | Symbols: SNL6 | SIN3-like 6 | chr1:3431780-3438370
FORWARD LENGTH=4024
Length=4024
Score = 490 bits (265), Expect = 4e-137
Identities = 1077/1447 (74%), Gaps = 143/1447 (10%)
Strand=Plus/Plus
Query 1150 AGATGCATTGAGCGGTTATACGGGGATTATGGGCTTGATGTCGTGGATTTTTTGAAGAAG 1209
||||||||||||||||||||||| ||| |||||||||||||| ||||| |||||||||||
Sbjct 1581 AGATGCATTGAGCGGTTATACGGTGATAATGGGCTTGATGTCATGGATCTTTTGAAGAAG 1640
Query 1210 AGTTCT-CATA-CTGCCTTACCGGTGATACTAACACGCTTGAAGCAAAAACAAAAAGAAT 1267
| | | |||| | || ||||||||||||||||| ||||||||||| || ||| ||||||
Sbjct 1641 A-ATATGCATAGC-GCTTTACCGGTGATACTAACGCGCTTGAAGCAGAAGCAAGAAGAAT 1698
Query 1268 GGGCTAGGTGTCGCTCTGATTT-CAGGAAAGTATGGGCTGAAGTATATGCTAAGAATCAT 1326
|||| ||||| | |||||||| || |||||| ||||| ||||||||||||||||||||
Sbjct 1699 GGGCAAGGTGCCATTCTGATTTCCA-GAAAGTTTGGGCAGAAGTATATGCTAAGAATCAC 1757
Query 1327 CAAAAATCACTCGATCATCGTAGTTTCTATTTCAAGCAGCAGGACTCCAAGAATTTGAGC 1386
|| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1758 CATAAGTCACTAGATCATCGTAGTTTCTATTTCAAGCAGCAGGACTCCAAGAACTTGAGC 1817
Query 1387 ACAAAAGGTTTAGTGGCGGAAATTAAAGATATCAGCGAGAGGAAGCATAAAGAAGACCTT 1446
|||||| |||||||||| ||| | ||||||||||| |||| |||||| ||||||| ||
Sbjct 1818 ACAAAATGTTTAGTGGCAGAAGTGAAAGATATCAGTGAGAAAAAGCATCAAGAAGATCTG 1877
Query 1447 ATTCGTGCCGTTGCTGTTGGAAATAAACCCGC-TTTCACCCCAGATATGGAGTTTAGTTA 1505
||| || |||||||| || || ||| ||| || || ||| ||||||| | |||
Sbjct 1878 CTTCAAGCTATTGCTGTTAGAGTTATGCCCTTATTT-ACTCCTGATTTGGAGTTCAATTA 1936
Query 1506 TACTGATACACAAGTTCAT-ACTGACCTATATCAACTAATCAAGTATTATTGTGAAGAAA 1564
| |||||||||| |||| | || ||||||| |||||||||||||| ||||||||||
Sbjct 1937 TTGTGATACACAAATTCACGAG-GATCTATATCTGCTAATCAAGTATTACTGTGAAGAAA 1995
Query 1565 TATATGCTACTGAACAGGCGGATAAAGTCATGGAGCTGTGGGTAACTTTTTTGGAACCAA 1624
||| ||| |||||||| | ||||| || ||| |||||||| |||| |||||||| || |
Sbjct 1996 TATGTGCCACTGAACAATCAGATAAGGTAATGAAGCTGTGGATAACCTTTTTGGAGCCCA 2055
Query 1625 TGCTT-GGTGTTCCTTCTAGGTCTCAA-ACTAA--TGAGACAATG-AAGGATGT-TGCAA 1678
| ||| || ||| ||| ||||||||| | ||| | | | || ||| |||| | |||
Sbjct 2056 T-CTTTGGCATTCTTTCGAGGTCTCAAGA-TAACCTT-G-CTCTGGAAG-ATGTGT-CAA 2109
Query 1679 A-TATCGAAGA-CAACCAAGCGCACCATGATGCATGTGAGGCAGTGAAGGAAAACACATG 1736
| | | ||| | ||||| || || ||||||||| |||||||||||| | || |
Sbjct 2110 AGT-T-GAAAAACAACCGAGAATTGCAAGATGCATGTTTGGCAGTGAAGGAGA-CA---G 2163
Query 1737 TGACGGTTCTTTGGCCTTAAACCTTAAACCGTT-AACA-CCTCCAAAATCGCCTAA-CAA 1793
| |||| || | ||||| ||||| | || | || || ||| || || | |||
Sbjct 2164 ---C--TTCTG-GGTC--AAACCGTAAACA-TCCAATATCC-CCGAAA-CGACTGAGCAA 2212
Query 1794 AGAAAACCCAATATTACAAGGAAGCTCTTTTCCGCAAGATATCCCA-CTCAATACACTAG 1852
||| || ||| | | |||||||| |||| || | ||||| || || | ||||| | ||
Sbjct 2213 AGATAATACAAAAATGCAAGGAAGTTCTTCTCGGGAAGATGTCTCAGC-CAATATAAAAG 2271
Query 1853 --AAAGCATTC--ATCAAGATAAAATGCATGATGGTGCAACTATAACTAATGAGGTTCTG 1908
||| | | | | | ||||| | || |||| |||| |||| ||||||||||||
Sbjct 2272 TGAAAAC-TGCCCAGCCCGATAAGCTTCAGGATGATGCAGCTATGACTAATGAGGTT--- 2327
Query 1909 CAGGATAGCCAGCCTTCCAAACTGGTGTCACCCAGAAATGAT-ATGATAATGAAGGGTGT 1967
| | |||| |||||||| | |||||||||| |||||| | ||||||| ||| ||
Sbjct 2328 -A---T--CCAGTCTTCCAAATTTGTGTCACCCAAAAATGACCA-GATAATGGAGGATGA 2380
Query 1968 AGAGAATTGTAGTAAGGTTAGTG-ATGTATCAATGGGAGAGCATAAGGTCGAGCGTGAAG 2026
|| |||| || | ||||| | | | ||| ||| | ||||| || | || |||
Sbjct 2381 AGGGAATCATA-T--GGTTAACGCA-GCATCGGTGGAAAAGCATGAGCT--AG----AAG 2430
Query 2027 AGGGTGAATTATCTCCCACTGAAATTT-TCGAGCAC-GAAAATATTGAGGTTTATAAAGA 2084
||||||||||||||||||| | | | | ||||| | || | |||||||| || | |
Sbjct 2431 AGGGTGAATTATCTCCCACCGCCAGTCGT-GAGCAAAGCAACT-TTGAGGTTAATGGACA 2488
Query 2085 GAATGGGCT-CGAGCCTGTACAGAAAC-TGCCAGACAATGAAATAAGTAATAAAGATCGA 2142
||||| || | ||||| |||| ||| || | ||||||| || ||| |||||||| | |
Sbjct 2489 GAATGC-CTTCAAGCCTTTACA-AAAGGTGACGGACAATGTAAGAAGCAATAAAGA-CAA 2545
Query 2143 GAATACAAAGAGGGTGCATATGGTACTGAAGCTGGAGCAA-GAAGCAATA-TCAAACCTG 2200
| ||||| | || ||| | ||| ||||||| ||| ||| | || | ||
Sbjct 2546 G----CAAAGTTG-TG-ATAA---A---AAG--GGAGCAAAGAA-CAAAACTCGCGC-TG 2589
Query 2201 AAGATGATGAA-AATAAAATTACTCAAAAGTTATCAGAAGGGGAAGAAAA-TGCCTCTAA 2258
||||||| || || |||||| ||| ||||||||||| | || || | ||||||| |
Sbjct 2590 AAGATGACAAACAAGAAAATTG-TCACAAGTTATCAGA-GAATAATAAGACTGCCTCTGA 2647
Query 2259 AATTATTGTCTCAACAAGCAAGTTTGGTGGCCAAGTTTCTTCCGATGAAGAGCATAA-AG 2317
||| |||| ||| || |||| || | ||| | | |||||||| | || ||
Sbjct 2648 AATGCTTGTTTCAGGAACCAAGGTT-------A-GTTG-T-C--ATGAAGAGAACAACAG 2695
Query 2318 GAGCTATGAACTGTGACCGGCGTGATAGTGTGGCTGAGAGTGAAAACGAGGCTGGAGGGA 2377
|| |||||||||| | |||||| ||||||||||| ||| || | | || | |
Sbjct 2696 -AGTTATGAACTGTAATGGGCGTGGTAGTGTGGCTG-GAGAGAT---G-G-CT--A---A 2743
Query 2378 TGGTTAATTCTAACGAGGTTGAAGATGGATCTTTTGTCACATTTTCAGAACGGGATCTGC 2437
||| ||| | || | | | ||||||||||| || | || |||||||||||| |||||
Sbjct 2744 TGGA-AAT-C-AA-G-G-T-GAAGATGGATCCTTCG-CA--TTTTCAGAACGGTTTCTGC 2793
Query 2438 AA-CGTGTAAAGCCCCTTGCAAAGCATGTGCCTGGGACACTGCAAGCAAGTGAATGT-GA 2495
|| | |||||| || |||| |||||| || || || || ||||||| |||||| | |
Sbjct 2794 AAAC-TGTAAAACCTGTTGCCAAGCATCTGTCTTGGCCATTGCAAGCTAGTGAAACTTG- 2851
Query 2496 CTCCCGGAATGATTCTCGAGTTTTCTATGGGAATGACTCATTTTATATGCTTTTTAGGCT 2555
||||| ||||||||||| |||||| || |||||||| || | |||| |||| ||||||||
Sbjct 2852 CTCCCAGAATGATTCTCAAGTTTTTTACGGGAATGATTCCTATTATGTGCTATTTAGGCT 2911
Query 2556 TCATCAA 2562
|||||||
Sbjct 2912 TCATCAA 2918
Score = 374 bits (202), Expect = 4e-102
Identities = 375/456 (82%), Gaps = 22/456 (5%)
Strand=Plus/Plus
Query 166 TATCTCAAAGCTGTGAAGGATATGTTTCACGACAATAAAGAAAAATATGAGACTTTCCTT 225
||||||||||||||||||||||| ||||||||||||||||| ||||||||| | |||| |
Sbjct 459 TATCTCAAAGCTGTGAAGGATATTTTTCACGACAATAAAGAGAAATATGAGTCATTCC-T 517
Query 226 GGAG-TCATGAAGGACTTCAAAGCTCAGAGAGTTGACACTAATGGCGTCATA-ACAAGAA 283
|||| |||||||||| ||||||||||||| | | ||||||||||| |||||| | ||| |
Sbjct 518 GGAGCTCATGAAGGAGTTCAAAGCTCAGACAATCGACACTAATGGTGTCATAGA-AAGGA 576
Query 284 TCAAAGAT-TTGTTCAAGGGCTATGA-CGACTTACTTTTGGGTTTTAATACCTTCTTGCC 341
| |||| | ||||||||||| || | ||| ||||||||||||||||||| ||||||||
Sbjct 577 TTAAAG-TGTTGTTCAAGGGTTA-CAGGGACCTACTTTTGGGTTTTAATACTTTCTTGCC 634
Query 342 GAAGGGGTACCAAATTACCCTTCAGCCCGAGGATGAGAAACCTAAGAAGCC-AGTGGATT 400
|| ||||| |||| ||||||| ||| ||||| ||||| |||||| | || |||||||
Sbjct 635 CAAAGGGTATAAAATAACCCTTCTGCCAGAGGAAGAGAAGCCTAAG-ATCCGGGTGGATT 693
Query 401 TCCAAGTA-GCTATCGAATTT-GTCAATAAGATTAAGGCGCGATTTGGAGGTGATGAACG 458
|| ||| | ||||||| ||| |||| ||||||||| || | ||||||| ||||||||
Sbjct 694 TCAAAG-ACGCTATCG-GTTTCGTCACCAAGATTAAGACGAGGTTTGGAGATGATGAACA 751
Query 459 TGCATATAAAAAATTCCTAGACATCTTGAACATGTATAGAAAGCA-AACCAAGTCCATCA 517
||| |||||| || ||||||||||||||| ||||||||||| | || |||||||||
Sbjct 752 TGCGTATAAACGGTTTCTAGACATCTTGAACTTGTATAGAAAGGAGAA-AAAGTCCATC- 809
Query 518 AC-GAGGTCTATC-AAGAGGTTACTCTGTTGTTCCAGGACCATGAAGATCTGC-TCGGAG 574
| |||||||| | ||||||||||| |||| ||| ||| ||||||||||||| | | |
Sbjct 810 TCTGAGGTCTA-CGAAGAGGTTACTATGTTATTCAAGGGTCATGAAGATCTGCTTATG-G 867
Query 575 AGTTTTTTCATTTCTTACCTGATTTTCGAGGATCAG 610
|||| || ||||||||||| ||| || || |||||
Sbjct 868 AGTTCGTTAATTTCTTACCTAATTGTCCAGAATCAG 903
Score = 204 bits (110), Expect = 6e-51
Identities = 185/221 (84%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 931 ATAAATGA-ATTGGATCTTGCTGGCTGCGCACAATGTACACCAAGTTATCGTCGCCTGCC 989
|||||||| || |||||| ||| ||| | || ||||| ||||||||||| | ||||||
Sbjct 1221 ATAAATGAGCTT-GATCTTTCTGAATGCACTCAGTGTACCCCAAGTTATCGACTCCTGCC 1279
Query 990 AGATGATTATCCCA-TTCATATTCCAAGCTACAGAAATTCACTTGGTGAAAAGGTACTTA 1048
| | |||||| || || | || ||||||||||||||| |||||||| ||||| ||| |
Sbjct 1280 AAAGGATTAT-GCAGTTGAGATCCCAAGCTACAGAAATACACTTGGTAAAAAGACACTCA 1338
Query 1049 ATGATCA-TTGGGTATCTGTGACATCGGGGAGTGAGGATTACTCATTCAAACACATGCGC 1107
|||| || || ||||||||| || || |||||||| ||||||||||||| || ||||||
Sbjct 1339 ATGACCACTT-GGTATCTGTCACTTCAGGGAGTGAAGATTACTCATTCAGTCATATGCGC 1397
Query 1108 AAAAACCAGTATGAAGAAAGCTTGTTTCGATGTGAGGATGA 1148
||||||||||||||||||||||||||||| |||||||||||
Sbjct 1398 AAAAACCAGTATGAAGAAAGCTTGTTTCGGTGTGAGGATGA 1438
> AT4G12020.2 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | protein
kinase family protein | chr4:7201656-7209648 FORWARD LENGTH=5867
Length=5867
Score = 274 bits (148), Expect = 4e-72
Identities = 237/279 (85%), Gaps = 9/279 (3%)
Strand=Plus/Plus
Query 102 AAGGCCTTTAACGATTGGTGGAGGAGGAACTACGGGAGCGCTAACAACAGATGCTGCTTT 161
||||||| ||||||||| ||||||||||| || ||||| | ||||||||| || ||| ||
Sbjct 870 AAGGCCTCTAACGATTGATGGAGGAGGAAATATGGGAGGGGTAACAACAGGTGATGCCTT 929
Query 162 G-ACATATCTCAAAGCTGTGAAGGATATGTTTCACGACAATAAAGAAAAATATGAGACTT 220
| || |||||||||||||||||||| | |||| | |||| | || |||||||| ||||
Sbjct 930 GAAC-TATCTCAAAGCTGTGAAGGACAAGTTTGAAGACAGT---GAGAAATATGACACTT 985
Query 221 TCCTTGGAGTCATGAAGGACT-TCAAAGC-TCAGAGAGTTGACACTAATGGCGTCATAAC 278
|||||| |||| |||| |||| | ||| | |||| |||||||||||| |||||||||| |
Sbjct 986 TCCTTGAAGTCTTGAATGACTGT-AAA-CATCAGGGAGTTGACACTAGTGGCGTCATAGC 1043
Query 279 AAGAATCAAAGATTTGTTCAAGGGCTATGACGACTTACTTTTGGGTTTTAATACCTTCTT 338
||| | |||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 1044 CAGATTAAAAGATTTGTTCAAGGGCCATGACGACTTACTTTTGGGTTTTAATACCTACTT 1103
Query 339 GCCGAAGGGGTACCAAATTACCCTTCAGCCCGAGGATGA 377
| | |||| ||||||||| ||| ||| ||||||||||||
Sbjct 1104 GTCAAAGGAGTACCAAATAACCATTCTGCCCGAGGATGA 1142
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 174229793039
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5