BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925113 Length=739 Score E Sequences producing significant alignments: (Bits) Value AT1G59690.1 | Symbols: | F-box associated ubiquitination effec... 292 2e-78 > AT1G59690.1 | Symbols: | F-box associated ubiquitination effector family protein | chr1:21935310-21935820 REVERSE LENGTH=432 Length=432 Score = 292 bits (158), Expect = 2e-78 Identities = 211/236 (89%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 501 GATAGACACGAATGGACGCATAATTGCTTTGATTTGCCTCTTTCTGAAATGGACCCAATA 560 |||||||||||||||||||||||| || || |||| |||||||||||||||||| |||| Sbjct 135 GATAGACACGAATGGACGCATAATCGCGTT--TTTGACTCTTTCTGAAATGGACCTAATA 192 Query 561 C-G-ACGCAAAGAGCCACGCTTTTGTGGTGTTAGTAATGCTGGTGAGCttttttttGCAC 618 | | | | ||| ||||| |||||| |||||||||| ||||||||||| || ||||||||| Sbjct 193 CGGAAAG-AAA-AGCCAAGCTTTTATGGTGTTAGTGATGCTGGTGAGATTGTTTTTGCAC 250 Query 619 CATGGATGTTGTCTGAATCGTTTAATATTCTATATTTCGATCCGAGGAGAAACAGTATTA 678 ||| ||| |||| |||||||||| || | |||||||| |||||||||||||||||||||| Sbjct 251 CATCGATATTGTTTGAATCGTTTTATCTACTATATTTTGATCCGAGGAGAAACAGTATTA 310 Query 679 GAGAAGTCTCGTTTGAAGGAATTGTGGGTGATGAATTTTGAAGCCGCTATGGATTT 734 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 311 GAGAAGTCTCGGTTGAAGGAATTGTGGGTGATGAATTTAGAAGCCGCTATGGATTT 366 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35867180958 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5