BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg925182
Length=4422
Score E
Sequences producing significant alignments: (Bits) Value
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:21... 7110 0.0
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:21... 1967 0.0
AT1G18410.1 | Symbols: | P-loop containing nucleoside triphosp... 418 2e-115
> AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:21489285-21501811
REVERSE LENGTH=4611
Length=4611
Score = 7110 bits (3850), Expect = 0.0
Identities = 4227/4410 (96%), Gaps = 21/4410 (0%)
Strand=Plus/Plus
Query 17 CGG-AGAGAATGGCTCCGAAGAAGAAACCTCAGAAGCAAAGCAACAAAGCTGCTTCGTCT 75
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 28 CGGAAGAGAATGGCTCCGAAGAAGAAACCTCAGAAGCAAAGCAACAAAGCTGCTTCGTCT 87
Query 76 TCTTCATCGTCGAAATCGAATTATCAGAAACCTTCTTCAGGTCCTAAGCTTCAGATTTCG 135
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 88 TCTTCATCGTCGAAATCGAATTATCAGAAACCTTCTTCAGGTCCTAAGCTTCAGATATCA 147
Query 136 GCAGAGAACGAAGATCGTTTGCGGCGGCTCTTGCTCAACTCTGGCCGCAT-CGGTCCTTC 194
|| |||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||
Sbjct 148 GCGGAGAACGAGGATCGTTTGCGGCGGCTCTTACTCAACTCTGGCCGC-TCCGGTCCTTC 206
Query 195 GGTTCCGGCTCCAATCAGTAATTCTCTCTCCAAAGCTCAAAAGACAAAGAAACTCAATAA 254
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 207 GATTCCAGCTCCAATCAGTAATTCTCTCTCCAAAGCTCAAAAGACAAAGAAACTCAATAA 266
Query 255 TGTCTATGAGAAGCTCTCTTGCGAAGGTTTCGTTGATGATCAGATTGAGCTCGCTCTCTC 314
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 267 TGTCTATGAGAAGCTCTCTTGCGAAGGTTTCGTTGATGATCAGATTGAACTCGCTCTCTC 326
Query 315 TTCTCTTAGAGATGGAGCTACGTTTGAGGCTGCACTTGATTGGCTTTGCTTGAACTTGCC 374
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 327 CTCTCTTAGAGATGGAGCTACGTTTGAGGCTGCACTTGATTGGCTTTGTTTGAATTTGCC 386
Query 375 GAGTCATGAGTTGCCAGTGAAGTTTTCTACTGGAGCTTCTCGCTTTCCTACCACAGGAGG 434
||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 387 GAGTCATGAGTTGCCTGTGAAGTTTTCTACTGGAGCTTCTCGTTTTCCTTCCACAGGAGG 446
Query 435 TACTGTGGGTGTGATATCGATCTCACGGGATGATTGGAATGAATCTGCTGACTCTTCAGT 494
| |||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||
Sbjct 447 TTCTGTGGGTGTGATATCGACCTCACGGGACGATTGGAATGATTCTACTGACTCTTCAGT 506
Query 495 CCA-GGTAGAGGAGGAGGAGCCTGCGGTTTTCGTTCGAGTGAAGGGCAAA-CAAGATGAG 552
|| ||||||||| ||||| ||||| ||||| ||||| |||||||| ||| ||||||||
Sbjct 507 -CAGGGTAGAGGAAGAGGAACCTGCAGTTTTTGTTCGTGTGAAGGG-AAAGCAAGATGAA 564
Query 553 GAAGATACTCTTAATTCCGGCAAATCGTCTCAAGCTGATTGGATTCGTCAGTATATGATG 612
||||||||||||| ||| | ||| || |||||||||||||||||||| ||||||||||||
Sbjct 565 GAAGATACTCTTAGTTCTGACAAGTCATCTCAAGCTGATTGGATTCGGCAGTATATGATG 624
Query 613 AGACAGGAAGAGGAAGAATTGGAATGTTGGGAAGATGAGGTAGATGGTATTGACCCCGGA 672
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 625 AGACAGGAAGAGGAAGAATTGGAATGTTGGGAAGATGAAGTAGATGGTATTGACCCCAGA 684
Query 673 AAGAAGGTATCTGGTCCAAGGCCATTCGATGTGATTGCCAAAGAATATTATTCGGCAAGG 732
|| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 685 AATAAGGTCTCTGGTCCAAGGCCATTCGATGTGATTGCCAAAGAATACTATTCGGCAAGA 744
Query 733 TCAGATGCTATAAAAGCTAAGGAGAAGCGTGATAAAAGAGGACAGGAGCAAGCAGGCCTA 792
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 745 TCAGATGCTATAAAAGCAAAGGAGAAGCGTGATAAAAGAGGACAGGAGCAAGCAGGCCTA 804
Query 793 GCAATTCGGAAGCTCAAGCAAGAGATATCTGATCTTGGGTTATCAGAAGCAATGTTGGAA 852
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 805 GCCATTCGCAAGCTCAAGCAAGAGATATCTGATCTTGGGTTATCAGAAGCAATGTTGGAA 864
Query 853 TCTGAATTTCAGCGTGAACATGCTTTTGAAAGTGCTACAGAACAAGAATCAACGTGTCCC 912
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 865 TCTGAATTTCAGCGTGAACATGCTTTTGAAAGTGCTACAGAACAAGAATCAACCTGTCCC 924
Query 913 ATTTCCAATAACCTTCATGAGTCAGTTGATGCTGACGATGTCTCTGTTCAGCA-GTTAGA 971
|||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 925 ATTTCCGATAACCTTCATGAGTCAGTTGATGCTGACGATGTCTCTGTTCAG-ATGTTAGA 983
Query 972 TAACTTGACCTTAG-ATGCCAATCCTGCTGGGAGCTGTGAGTCTGAGGAAATTCAAACTA 1030
||| |||||||| | || |||||||||||| ||||| |||||||||||||||||||||||
Sbjct 984 TAATTTGACCTT-GAATACCAATCCTGCTGAGAGCTATGAGTCTGAGGAAATTCAAACTA 1042
Query 1031 AAGCTCTTCCTTCAAGTTCCTCAGGACAAGATTTAGTTGCATCGGATGAAGATTCAGAGG 1090
|||||||||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct 1043 AAGCTCTTCCCTCAAGTTCCTCGGGACAAGATTTTGTTGCATCAGATGAAGATTCAGAGG 1102
Query 1091 ACGTGGAACTTGGCGATACATTCTTTGAAGAAATTCCGCCTTCTGAAATTTCACCCCATG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1103 ACGTGGAACTTGGCGATACATTCTTTGAAGAAATTCCGCCTTCTGAAATTTCACCCCATG 1162
Query 1151 AACTCCTGGAATTGCAGAAGGAGGAAAAGATGAGAGAACTACGCAGTGAGAAAAATCTCG 1210
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1163 AACTCCTGGAATTGCAGAAGGAGGAAAAGATGAGAGAACTACGTAGTGAGAAAAATCTGG 1222
Query 1211 GGAAACTAGATGGTATCTGGAAGAAGGGTGATGCGCAAAAGATCCCAAAGGCATTTCTCC 1270
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1223 GGAAACTAGATGGTATCTGGAAGAAGGGTGAGGCGCAAAAGATCCCAAAAGCATTTCTCC 1282
Query 1271 ATCAATTGTGTCAAAGATCAGGGTGGGAAGCACCAAAGTTCAATAAAGTAACCGGTGAAG 1330
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1283 ATCAATTGTGTCAAAGATCAGGGTGGGAAGCACCAAAGTTCAATAAAGAAACCGGTGAAG 1342
Query 1331 AAAGGAATTTCTCATATGCTGTAAGTATCCTGCGCAAAGCCAGT-GGACGGGGTAAAAAC 1389
||| |||||||||||| |||||||||| ||||||||||||||| ||| |||||||||||
Sbjct 1343 GAAGAAATTTCTCATATACTGTAAGTATTCTGCGCAAAGCCAGTGGGA-GGGGTAAAAAC 1401
Query 1390 AGACAAGCCGGGGGTCTTGTAACTCTTCAACTTCCTCTTAAAGATGATAACTTTGAATCC 1449
||||||||||| ||||| |||||||| |||||||||| ||||||||| || |||||||||
Sbjct 1402 AGACAAGCCGGTGGTCTGGTAACTCTCCAACTTCCTCCTAAAGATGAGAATTTTGAATCC 1461
Query 1450 ATCGAGGATGCACAAAACAAAGTTGCGGCATTTGCTCTTCATAAGCTATTTTCTGATTTA 1509
|||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||
Sbjct 1462 ATCGAGGATGCACAAAACAAAGTTGCAGCATTTGCTCTTCATAAACTTTTTTCTGATTTA 1521
Query 1510 CCTGTCCACTTTGCAATTACGGAGCCTTATGCCTCTCTAGTTTTGAACTGGAAACAAGAG 1569
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1522 CCTGTCCACTTTGCAATTACGGAGCCTTATGCTTCTCTAGTTTTGATCTGGAAACAAGAG 1581
Query 1570 GAATTGTTGTG---TACCATACAAAGCACAGAAGAAGACCGAAGAGCTAATTTTGTTGAT 1626
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1582 GAATTGTTGTGTACTACCATACAAAGCACAGAAGAAGACCGAAGAGCTAATTTTGTTGAT 1641
Query 1627 AAGTTTCTTGAGGAGGACAATTTCAGTTTGACCGCTTCGTCAAGTAGCATTGACAATGCG 1686
||||| ||||||||||||| ||| ||||||||| ||||||| |||||| |||| ||| ||
Sbjct 1642 AAGTTGCTTGAGGAGGACAGTTTTAGTTTGACCACTTCGTCGAGTAGCTTTGAGAATTCG 1701
Query 1687 CTTCCATTGGTAGACTCCTATGTCAAAGAGAAGGATGACTTGGGTGTTGTCAAATCTAAC 1746
||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1702 CTTCCGTTGGTAGACTCCTATGTCAAAGACAAAGATGACTTGGGTGTTGTCAAATCTAAC 1761
Query 1747 CACAGAGCTAGAAA-AGACTCTTATATAGAAGCTGAGTGTTTATCTCTCCAACGAAAACA 1805
||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1762 AACAGAGCTA-AAAGAGACTCTTATATAGAGGCTGAGTGTTTATCTCTCCAACGAAAACA 1820
Query 1806 AGAAAACAAAAAGAGAACGCAAAAGTACAAGGACATGTTGAAAACTAGAACTGCTCTTCC 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1821 AGAAAACAAAAAGAGAACGCAAAAGTACAAGGACATGTTGAAAACTAGAACTGCTCTTCC 1880
Query 1866 TATATCTGAAGTTAAGAATGGCATACTCCAGCATCTGAAAGAAAAAGATGTCTTGGTGGT 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1881 TATATCTGAAGTTAAGAATGGCATACTCCAGCATCTGAAAGAAAAAGATGTCTTGGTGGT 1940
Query 1926 ATGCGGAGAAACAGGCTCTGGAAAGACTACACAGGTTCCCCAATTTATATTGGATGATAT 1985
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1941 ATGCGGAGAAACAGGCTCTGGAAAGACTACACAGGTTCCTCAATTTATATTGGATGATAT 2000
Query 1986 GATTGATTCAGGGCATGGTGGATACTGTAATATCATATGCACACAACCTCGGCGGATAGC 2045
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2001 GATTGATTCGGGGCATGGTGGATACTGTAATATCATATGCACACAACCTCGTCGGATAGC 2060
Query 2046 GGCTATCTCTGTTGCTCAAAGAGTTGCTGATGAGCGTTGTGAATCCTCTCCAGGCTCAGA 2105
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2061 GGCTATCTCTGTTGCTCAAAGAGTTGCTGATGAGCGTTGTGAATCCTCTCCAGGCTTAGA 2120
Query 2106 TGACTCCTTGGTTGGGTATCAAGTTCGTCTTGAAAGTGCAAGGAGTGACAAGACTAGGCT 2165
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2121 TGACTCATTGGTTGGGTATCAAGTTCGTCTTGAAAGTGCAAGGAGTGACAAGACTAGGCT 2180
Query 2166 GCTGTTTTGTACTACTGGCATTCTACTGAGGAAACTCGCTGGGGATAAAACCTTGAACGA 2225
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2181 GCTGTTTTGTACTACTGGCATTCTACTGAGGAAACTCGCTGGGGATAGAACCTTGAACGA 2240
Query 2226 TGTTACACATATTATAGTCGATGAAGTGCATGAGCGGTCTCTTTTGGGTGATTTTCTTCT 2285
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2241 TGTTACACATATTATAGTTGATGAAGTGCATGAGCGGTCTCTTTTGGGTGATTTTCTTCT 2300
Query 2286 CATTATTTTGAAGACCCTGATTGAGAAGCAATCATGTGATAATACATCACGTAAACTTAA 2345
||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 2301 AATTATTTTGAAGAGCCTGATTGAGAAGCAATCATGCGATAATACATCACGTAAACTGAA 2360
Query 2346 AGTTATCCTTATGTCTGCTACTGTTGACGCTGATCTATTCTCAAGATATTTTGGCCATTG 2405
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2361 AGTTATCCTTATGTCTGCTACTGTTGACGCTGATCTATTCTCAAGATATTTTGGTCATTG 2420
Query 2406 TCCTGTGATAACTGCTCAAGGACGAACACATCCAGTCACTACCCACTTCCTGGAGGAGAT 2465
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2421 TCCTGTGATCACTGCTCAAGGACGAACACATCCAGTCACTACCCACTTCCTGGAGGAGAT 2480
Query 2466 TTATGAGAGTATTAACTACCTTCTTGCTCCAGATTCTCCTGCTGCGCTAAGGTCTGATTC 2525
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 2481 TTATGAGAGTATTAACTACCTTCTTGCTCCAGATTCTCCTGCTGCGCTAAGATCTGATAC 2540
Query 2526 ATCTATTAAAGAAAAGCTTGGTTCTGTAAATGACCGTAGGGGAAAAAAGAATCTTGTATT 2585
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2541 ATCTATTAAAGACAAGCTTGGTTCTGTAAATGACCGTAGGGGGAAAAAGAATCTTGTATT 2600
Query 2586 GGCTGGCTGGGGCGACGATTATTTGCTTTCGGAGGACTGTCTTAACCCATTTTATGTTTC 2645
|||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct 2601 GGCTGGCTGGGGCGACGATTATTTGCTTTCAGAGGACTGTCTTAATCCTTTTTATGTTTC 2660
Query 2646 TAGTAATTACAACTCATACAGTGACCAAACACAGCAAAATCTGAAAAGGTTAAATGAGGA 2705
|||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 2661 CAGTAATTACAACTCATACAGTGACCAAACACAACAAAATCTGAAAAGGTTAAACGAGGA 2720
Query 2706 TATAATTGACTACGAGCTTCTTGAAGAGTTGATATGCCACATTGATGACACTTGTGAGGA 2765
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2721 TAGAATTGACTACGAGCTTCTTGAAGAGTTGATATGCCACATTGATGACACTTGTGAGGA 2780
Query 2766 AGGGGCCATTCTTATATTTTTGCCTGGAGTGTCAGAAATTTACATGTTACTCGATAGGAT 2825
||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
Sbjct 2781 AGGAGCCATTCTTATATTTTTGCCTGGAGTGGCAGAAATTTACATGTTACTCGATATGTT 2840
Query 2826 AGCTGCTTCCTATCGTTTTCGTGGACCTGCTGCAGATTGGCTTCTTCCCCTACATTCTTC 2885
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2841 AGCTGCTTCCTATCGTTTTCGTGGACCTGCTGCAGATTGGCTTCTTCCTCTACATTCTTC 2900
Query 2886 TATTGCATCTACAGAACAGAGAAAGGTGTTTCTGCGTCCCCCTAAAGGCATACGGAAGGT 2945
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2901 TATTGCATCTTCAGAACAGAGAAAGGTGTTTCTGCGTCCCCCTAAAGGCTTACGGAAGGT 2960
Query 2946 TATCGCAGCTACAAATATTGCAGAGACCAGTATAACAATTGATGATGTGGTGTATGTGAT 3005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 TATCGCAGCTACAAATATTGCAGAGACCAGTATAACAATTGATGATGTGGTGTATGTGAT 3020
Query 3006 TGACAGTGGCAAACACAAGGAAAATCGCTACAATCCACAGAAGAAATTGTCGAGCATGGT 3065
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3021 TGACAGTGGCAAACACAAGGAAAATCGCTACAATCCACAGAAGAAACTGTCGAGCATGGT 3080
Query 3066 GGAAGATTGGATATCTCAAGCAAATGCAAGACAAAGAACAGGAAGGGCTGGACGTGTCAA 3125
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 3081 GGAAGATTGGATATCTCAAGCAAATGCAAGACAAAGAACAGGAAGAGCTGGACGCGTCAA 3140
Query 3126 ACCTGGGATTTGCTTTTCATTGTACACACGCTATAGGTTCGAGAAGCTAATGCGTCCCTA 3185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3141 ACCTGGGATTTGCTTTTCATTGTACACACGCTATAGGTTCGAGAAGCTAATGCGTCCCTA 3200
Query 3186 TCAGGTTCCTGAGATGCTGCGGATGCCATTAGTAGAGTTATGTCTACAAATCAAATTGCT 3245
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3201 TCAGGTTCCTGAAATGCTGCGGATGCCATTAGTAGAGTTATGTCTACAAATCAAATTGCT 3260
Query 3246 TGGCTTGGGTCACATTAAACCTTTTCTGTCCAAGGCTTTGGAACCTCCGAGTGAAGGTGC 3305
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3261 TGGCTTGGGTCACATTAAACCTTTTCTGTCCAGGGCTTTGGAACCTCCGAGTGAAGGTGC 3320
Query 3306 TATGACCTCTGCGATTTCATTGTTACACGAGGTTGGTGCTGTTGAAGGGGATGAAGAGTT 3365
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3321 TATGACCTCTGCGATTTCATTGTTACATGAGGTTGGTGCTGTTGAAGGGGATGAAGAGTT 3380
Query 3366 GACACCACTTGGGCATCATTTAGCGAAACTTCCTGTTGATGTGTTAATTGGAAAGATGCT 3425
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3381 GACACCACTTGGGCATCATTTAGCCAAACTTCCTGTTGATGTGTTAATTGGAAAGATGCT 3440
Query 3426 GTTATATGGTGGAATATTTGGTTGCTTATCACCTATTCTCTCGATCGCTGCTTTCTTGAG 3485
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3441 GTTATACGGTGGAATATTTGGTTGCTTATCACCTATTCTCTCGATCGCAGCTTTCTTGAG 3500
Query 3486 CTACAAATCGCCGTTTATATACCCCAAAGATGAGAAGCAAAATGTCGACCGGGTGAAACT 3545
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3501 CTACAAATCGCCGTTTATATATCCCAAAGATGAGAAGCAAAATGTCGACCGGGTGAAACT 3560
Query 3546 TGCTCTTTTGTCTGACAATCTGGG-GAGCTCGAGTGATTTAAACAACAATGACAGACAAT 3604
||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||
Sbjct 3561 TGCTCTTTTGTCTGACAATG-GGGTGAGCTCAAGTGATTTAAACAACAATGACAGACAAT 3619
Query 3605 CTGATCACCTCCTTATGATGGTTGCATACGATAAATGGGTGAAGATACTGCAGGAGCGAG 3664
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3620 CTGATCACCTCCTTATGATGGTTGCATACGATAAATGGGTGAAGATACTGCAAGAGCGAG 3679
Query 3665 GAATGAACGCTGCACAGAGGTTCTGTGAATCAAAGTTCTTGAGCAGCTCAGTGATGCGGA 3724
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3680 GAATGAAAGCTGCACAGAGGTTCTGTGAATCAAAGTTCTTGAGCAGCTCAGTGATGCGGA 3739
Query 3725 TGATCAGAGATATGAGGGTACAATTTGGCACATTACTTGCCGATATCGGGCTCATCAATC 3784
|||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3740 TGATCAGAGACATGAGAGTACAATTTGGCACATTACTTGCCGACATCGGGCTCATCAATC 3799
Query 3785 TTCCTAAAACAGGAGAGTTTTCGGGGAGAAAAAAGGAGAATCTTGATGTCTGGTTTTCTG 3844
|||||||||||||||||||||| || || |||||||| ||||||||||||||||||||||
Sbjct 3800 TTCCTAAAACAGGAGAGTTTTCAGGAAGGAAAAAGGAAAATCTTGATGTCTGGTTTTCTG 3859
Query 3845 ACCGAACTCAACCTTTCAATATGTATTCACAACAACCTGAAGTTGTTAAGGCGATATTGT 3904
||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |
Sbjct 3860 ACCCAACTCAACCTTTCAATATGTATTCACAGCAACCTGAAGTTGTTAAGGCTATACTAT 3919
Query 3905 GCGCAGGACTATATCCTAATATTGCAGCCAATGATAAGGGAATTACAGAGACAGCGTTTA 3964
|||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||
Sbjct 3920 GCGCAGGACTATATCCTAATATAGCAGCCAATGATAAAGGAATTACAGAGACAACGTTTA 3979
Query 3965 ACAGTTTGACAAAGCAAGGAAACCAAACAAAGAGCTATTCGGCATGGTACGATGGCAGAA 4024
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3980 ACAGTTTGACAAAGCAAGGAAACCAAACAAAGAGCTACTCGGCATGGTACGATGGCAGAA 4039
Query 4025 GAGAAGTTCATATCCATCCATCTTCTATAAACAGCAACTTCAAAGCATTTCAATACCCTT 4084
| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 4040 GGGAAGTTCATATCCATCCATCTTCCATAAACAGCAACTTCAAAGCATTTCAAAACCCTT 4099
Query 4085 TCCTTGTATTCCTTGAGAAGGTCGAAACGAACAAAGTATATTTGCGAGATACAACCATTG 4144
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 4100 TCCTTGTATTCCTTGAGAAGGTGGAAACGAACAAAGTATATTTGCGAGATACAACCATTG 4159
Query 4145 TATCTCCTTTCTCCATTCTACTTTTTGGCGGTTCAATCAATGTTCATCATCAGAGTGGAT 4204
| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 4160 TTTCTCCTTTCTCTATTCTACTTTTTGGCGGCTCAATCAATGTTCATCATCAGAGTGGAT 4219
Query 4205 CAGTCACAATTGATGGGTGGTTGAAGGTAGCAGCACCAGCTCAAACTGCGGTTTTGTTCA 4264
||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 4220 CAGTCACTATTGATGGGTGGTTAAAGGTAGCAGCACCAGCTCAAACCGCGGTTTTGTTCA 4279
Query 4265 AAGAGCTCCGGTTAACCCTTCATTCCATTCTCAAAGATCTCATCCGAAAACCCGAGAAAT 4324
|||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||
Sbjct 4280 AAGAACTCCGGTTAACCCTCCATTCCATTCTCAAAGATCTTATCCGAAAACCTGAGAAAT 4339
Query 4325 CAGGTATTGTCCACAACGAAGTCGTCAAATCTATGGTCCATCTTCTTATAGAAGAAGGCA 4384
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct 4340 CAGGTATTGTCCACAACGAAGTCGTCAAATCGATGGTTCATCTTCTTATAGAAGAAGGAA 4399
Query 4385 AACCGCAACACACATGAACTTAAAAAGGAA 4414
|||||||||||| ||||||| |||||||||
Sbjct 4400 AACCGCAACACAAATGAACT-AAAAAGGAA 4428
> AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:21478590-21487839
REVERSE LENGTH=4254
Length=4254
Score = 1967 bits (1065), Expect = 0.0
Identities = 1497/1701 (88%), Gaps = 47/1701 (3%)
Strand=Plus/Plus
Query 2711 TTGACTACGAGCTTCTTGAAGAGTTGATATGCCACATTGATGACACTTGTGAGGAAGGGG 2770
||||||| || |||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 2591 TTGACTATGATCTTCTTGAAGAGTTGATATGTCACATTGATGACACTTGTGAGGAAGGAG 2650
Query 2771 CCATTCTTATATTTTTGCCTGGAGTGTCAGAAATTTACATGTTACTCGATAGGATAGCTG 2830
|||||||| | |||||||||||| |||||||||| ||||| ||||| ||||| ||||||
Sbjct 2651 CCATTCTTGTGTTTTTGCCTGGAATGTCAGAAATCAACATGCTACTCAATAGGTTAGCTG 2710
Query 2831 CTTCCTATCGTTTTCGTGGACCTGCTGCAGATTGGCTTCTTCCCCTACATTCTTCTATTG 2890
|||||||||||||||||||| || ||| ||||||||||||||| ||||||||||||||||
Sbjct 2711 CTTCCTATCGTTTTCGTGGAGCTTCTGGAGATTGGCTTCTTCCTCTACATTCTTCTATTG 2770
Query 2891 CATCTACAGAACAGAGAAAGGTGTTTCTGCGTCCCCCTAAAGGCATACGGAAGGTTATCG 2950
||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2771 CATCTACAGAACAGAAAAAGGTGTTTCTGCGCCCCCCTAAAGGCATACGGAAGGTTATCA 2830
Query 2951 CAGCTACAAATATTGCAGAGACCAGTATAACAATTGATGATGTGGTGTATGTGATTGACA 3010
||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |
Sbjct 2831 TAGCTACAAATATTGCCGAGACCAGTATAACAATTGAGGATGTGGTTTATGTGATTGATA 2890
Query 3011 GTGGCAAACACAAGGAAAATCGCTACAATCCACAGAAGAAATTGTCGAGCATGGTGGAAG 3070
|||| |||||||||||||||||||| || ||||| ||||||||||| |||||||||||||
Sbjct 2891 GTGGAAAACACAAGGAAAATCGCTATAACCCACATAAGAAATTGTCAAGCATGGTGGAAG 2950
Query 3071 ATTGGATATCTC-AAGCAAATGCAAGACAAAGAACAGGAAGGGCTGGACGTGTCAAACCT 3129
||||| |||| | ||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 2951 ATTGGGTATC-CAAAGCAAATGCAAGACAAAGAATGGGAAGAGCTGGACGTGTCAAACCT 3009
Query 3130 GGGA-TTTGCTTTTCATTGTACACACGCTATAGGTTCGAGAAGCTAATGCGTCCCTATCA 3188
||| |||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||
Sbjct 3010 -GGACATTGCTTTTCATTATACACTCGCCATAGGTTCGAGAAGCTCATGCGTCCCTATCA 3068
Query 3189 GGTTCCTGAGATGCTGCGGATGCCATTAGTAGAGTTATGTCTACAAATCAAATTGCTTGG 3248
||||||||||||||||||| |||| ||||||||| | ||| |||| |||||||| |||||
Sbjct 3069 GGTTCCTGAGATGCTGCGGGTGCCTTTAGTAGAGCTGTGTTTACATATCAAATTACTTGG 3128
Query 3249 CTTGGGTCACATTAAACCTTTTCTGTCCAAGGCTTTGGAACCTCCGAGTGAAGGTGCTAT 3308
||||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||||
Sbjct 3129 CTTGGGTCAAATTAAGCCGTTTCTGTCCAAGGCTTTGGAACCTCCGAGTGAAAGTGCTAT 3188
Query 3309 GACCTCTGCGATTTCATTGTTACACGAGGTTGGTGCTGTTGAAGGGGATGAAGAGTTGAC 3368
| |||||| |||| |||||| ||| |||| || ||| |||||||||| |||||||||||
Sbjct 3189 AAACTCTGCAATTTTATTGTTGCACAAGGTCGGCGCTCTTGAAGGGGACGAAGAGTTGAC 3248
Query 3369 ACCACTTGGGCATCATTTAGCGAAACTTCCTGTTGATGTGTTAATTGGAAAGATGCTGTT 3428
|||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 3249 ACCACTAGGACATCATTTAGCAAAACTTCCTGTTGATTTGTTAATTGGAAAGATGCTGTT 3308
Query 3429 ATATGGTGGAATATTTGGTTGCTTATCACCTATTCTCTCGATCGCTGCTTTCTTGAGCTA 3488
||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3309 ATATGGTGGCATTTTTGGTTGCTTATCACCTATTCTCTCGATTGCTGCTTTCTTGAGCTG 3368
Query 3489 C---AAATCGCCGTTTATATACCCCAAAGATGAGAAGCAAAATGTCGACCGGGTGAAACT 3545
| |||||||||||| |||| ||||||||||| |||||||| ||||||||||||||
Sbjct 3369 CTGCAAATCGCCGTTTGTATATGCCAAAGATGAG---CAAAATGTGGACCGGGTGAAACT 3425
Query 3546 TGCTCTTTTGTCTGACAATCTGGGGAGCTCGAGTGATTTAAACAACAATGACAGACAATC 3605
||||||||||||||| || |||| ||| |||||| |||||||||||||||| ||||||||
Sbjct 3426 TGCTCTTTTGTCTGATAAGCTGGAGAGTTCGAGTAATTTAAACAACAATGATAGACAATC 3485
Query 3606 TGATCACCTCCTTATGATGGTTGCATACGATAAATGGGTGAAGATACTGCAGGAGCGAGG 3665
|||||||||||||||| |||||||||| || |||||||||| ||||||||| |||| |||
Sbjct 3486 TGATCACCTCCTTATGGTGGTTGCATATGAAAAATGGGTGAGGATACTGCATGAGCAAGG 3545
Query 3666 AATGAACGCTGCACAGAGGTTCTGTGAATCAAAGTTCTTGAGCAGCTCAGTGATGCGGAT 3725
| | || |||||| |||| |||||||| |||||||| |||| |||||||||||||||||
Sbjct 3546 ATTTAAAGCTGCAGAGAGTTTCTGTGAGTCAAAGTTTTTGAATAGCTCAGTGATGCGGAT 3605
Query 3726 GATCAGAGATATGAGGGTACAATTTGGCACATTACTTGCCGATATCGGGCTCATCAATCT 3785
||| ||||| | ||| ||| | ||||||| || |||||||| |||||||||||||||||
Sbjct 3606 GATGAGAGAGAGGAGAGTAGAGTTTGGCATGTTGCTTGCCGACATCGGGCTCATCAATCT 3665
Query 3786 TCCTAAAACAGG-AGAGTTTTCGGGGAGAAAAAAGGAGAATCTTGATGTCTGGTTTTCTG 3844
||||||| || | || ||| |||| ||||||||| ||||||| ||||||||||
Sbjct 3666 TCCTAAA---GGCA-AG-----GGG-AGAAGGAAGGAGAATTTTGATGTTTGGTTTTCTG 3715
Query 3845 ACCGAACTCAACCTTTCAATATGTATTCACAACAACCTGAAGTTGTTAAGGCGATATTGT 3904
|| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct 3716 ACAAAACTCAACCTTTCAATATGTATTCACAAGAACCTGAAGTTGTTAAGGCTATATTAT 3775
Query 3905 GCGCAGGACTATATCCTAATATTGCAGCCAATGATAAGGGAATTACAGAGACAGCGTTTA 3964
|||| ||||||| |||||||||||||| | ||| || ||| | | ||||||
Sbjct 3776 GCGCGGGACTATGTCCTAATATTGCAG--AGGGATTAG----TTA-A----C--CGTTTA 3822
Query 3965 ACAGTTTGACAAAGCAAGGAAACCAAACAAAGAGCTATTCGGCATGGTACGATGGCAGAA 4024
||| | || || |||| ||||| || | ||| | | |||| | ||||||| ||
Sbjct 3823 ACAAA--GCCA--GC--GGAAG--AAACACAGCGTTATGCAGTATGGCATGATGGCAAAA 3874
Query 4025 GAGAAGTTCATATCCATCCAT-CTTCTATAAACAGCAACTTCAAAGCATTTCAATACCCT 4083
||||||| |||||||||| | || |||| |||| |||| |||||| ||||||||||||
Sbjct 3875 GAGAAGTCCATATCCATCGAAACT-CTATTAACAAAAACTGCAAAGCGTTTCAATACCCT 3933
Query 4084 TTCCTTGTATTCCTTGAGAAGGTCGAAACGAACAAAGTA-TAT-T-TGCGAGATACAACC 4140
||| |||| |||||||| ||| ||||||| || ||||| ||| | ||| |||||||||
Sbjct 3934 TTCATTGTGTTCCTTGAAAAGCTCGAAACAAAGAAAGTGGTATATCTGCAAGATACAACT 3993
Query 4141 ATTGTATCTCCTTTCTCCATTCTACTTTTTGGCGGTTCAATCAATGTTCATCATCAGAGT 4200
|||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3994 GTTGTTTCTCCGTTCTCCATTCTACTTTTTGGCGGCTCAATCAATGTTCATCATCAGAGT 4053
Query 4201 GGATCAGTCACAATTGATGGGTGGTTGAAGGTAGCAGCACCAGCTCAAACTGCGGTTTTG 4260
|||||||| || |||||||||||||| ||| || |||||||||| |||||||| ||||||
Sbjct 4054 GGATCAGTTACCATTGATGGGTGGTTAAAGCTAACAGCACCAGCACAAACTGCCGTTTTG 4113
Query 4261 TTCAAAGAGCTCCGGTTAACCCTTCATTCCATTCTCAAAGATCTCATCCGAAAACCCGAG 4320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4114 TTCAAAGAGCTCCGGTTAACCCTTCATTCCATTCTCAAAGATCTCATCCGAAAACCCGAG 4173
Query 4321 AAATCAGGTATTGTCCACAACGAAGTCGTCAAATCTATGGTCCATCTTCTTATAGAAGAA 4380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4174 AAATCAGGTATTGTCCACAACGAAGTCGTCAAATCTATGGTCCATCTTCTTATAGAAGAA 4233
Query 4381 GGCAAACCGCAACACACATGA 4401
|||||||||||||||||||||
Sbjct 4234 GGCAAACCGCAACACACATGA 4254
Score = 1592 bits (862), Expect = 0.0
Identities = 1361/1598 (85%), Gaps = 49/1598 (3%)
Strand=Plus/Plus
Query 1053 AGG-ACAAGATTTAGTTG-CATCGGATGA-AGATTCAGAGGACGTGGAACTTGGCGATAC 1109
||| |||||| | ||||| | ||| |||| || || ||| ||| |||| |||||||||
Sbjct 983 AGGAACAAGAATCAGTTGTC-TCGAATGATAG-TTTAGATGACTTGGACCTTGGCGATTT 1040
Query 1110 ATTCTTTGAAGAAATTCCGCCTTCTGAAATTTCACCCCATGAACTCCTGGAATTGCAGAA 1169
||| ||||| ||||||||| || | ||| |||||||||||||||||||| |||||
Sbjct 1041 GTTCGACGAAGATGTTCCGCCTTATGTACCTTCTCCCCATGAACTCCTGGAATTACAGAA 1100
Query 1170 GGAGGAAAAGATGAGAGAACTACGCAGTGAGAAAAATCTCGGGAAACTAGATGGTATCTG 1229
| |||||| |||||||||||| ||| ||||||| |||| ||||||| | ||||||||
Sbjct 1101 GAAGGAAATTATGAGAGAACTATGCAATGAGAAACATCTTACGAAACTAAACGGTATCTG 1160
Query 1230 GAAGAAGGGTGATGCGCAAAAGATCCCAAAGGCATTTCTCCATCAATTGTGTCAAAGATC 1289
|||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| ||
Sbjct 1161 GAAGAAGGGTGAAGCGCAAAAGATCCCGAAGGCATTGCTCCATCAGTTGTGTCAAAGGTC 1220
Query 1290 AGGGTGGGA-AGCACCAAAGTTCAATAAAGTAACCGGTGAAGAAAGGAATTTCTCATATG 1348
||||| ||| ||||||||||||||||||||| || || |||| ||| || |||||||||
Sbjct 1221 AGGGT-GGATAGCACCAAAGTTCAATAAAGTGACTGGGGAAGGAAGAAACTTCTCATATA 1279
Query 1349 CTGTAAGTATCCTGCGCAAAGCCAGTGGACGGGGTAAAAACAGACAAGCCGGGGGTCTTG 1408
|| |||| | |||| ||| |||||||| ||||||| |||||||||||||||||| |
Sbjct 1280 CTACAAGTGTTATGCGTAAATCCAGTGGATTTGGTAAAAGCAGACAAGCCGGGGGTCTGG 1339
Query 1409 TAACTCTTCAACTTCCTCTTAAAGATGATAACTTTGAATCCATCGAGGATGCACAAAACA 1468
||||| |||||||||||| | ||| ||| | |||||||||||| |||||||||||||||
Sbjct 1340 TAACTATTCAACTTCCTCATCAAGTTGAGGATTTTGAATCCATCCAGGATGCACAAAACA 1399
Query 1469 AAGTTGCGGCATTTGCTCTTCATAAGCTATTTTCTGATTTACCTGTCCACTTTGCAATTA 1528
|||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||
Sbjct 1400 GAGTTGCGGCATTTGCTCTCCATAAGCTATTCTCTGATTTGCCTGTTCACTTTGCAATTA 1459
Query 1529 CGGAGCCTTATGCCTCTCTAGTTTTGAACTGGAAACAAGAGGAATTGTT-GTGTACCATA 1587
| ||||||||||||||||||||||||| ||||||||||||||||| || | ||| | |
Sbjct 1460 CTGAGCCTTATGCCTCTCTAGTTTTGATCTGGAAACAAGAGGAATCATTAG-GTA-TA-A 1516
Query 1588 CAAAGCACAGAAGAAG-ACCGAAGAGCTAATTTTGTTGATAAG-TTTCTTGAGG-AGGAC 1644
| ||||| ||||| || | |||||| || |||||||| ||| || ||||||| | |||
Sbjct 1517 C-AAGCAGAGAAG-AGCAAAGAAGAGAAAAATTTGTTGA-AAGCTTGCTTGAGGCA-GAC 1572
Query 1645 AATTTCAGTTTGACCGCTTCGTCAAGTA-GCATTGACAATGCGCTTCCATTGGTAGACTC 1703
|||||||| ||||| || | || || | |||| ||| ||| |||||| ||||||||||
Sbjct 1573 AATTTCAGCTTGACTACTACTTCGAG-AGGCATACACAGTGCACTTCCAATGGTAGACTC 1631
Query 1704 CTATGTCAAAGAGAAGGATGACTTGGGTGTTGTCAAATCTAACCACAGAGCTAGAA-AAG 1762
|| |||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||
Sbjct 1632 CTGTGTCAAAGAGAATGATGACTTGGATGTTGTCAAATCTAACCACAGAGCCAGAAGAA- 1690
Query 1763 ACTCTTATATAGAAGCTGAGTGTT-TATCTCTCCAACGAAAACAAGAAAACAAAAAG-AG 1820
|||||| || | |||||| |||| | |||||| ||| ||||||||||||||| ||| ||
Sbjct 1691 ACTCTTCCATGGCAGCTGAATGTTCT-TCTCTCAAACAAAAACAAGAAAACAAGAAGAAG 1749
Query 1821 AACGCAAAAGTACAAGGACATGTTGAAAACTAGAACTGCTCTTCCTATATCTGAAGTTAA 1880
| ||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||
Sbjct 1750 -ATGCAGAAGTACAAGGACATGTTGAAAACTAGAGCTGCTCTTCCTATATCAGAAGTGAA 1808
Query 1881 GAATGG-CATACTCCAGCATCTGAAAGAAAAAGATGTCTTGGTGGTATGCGGAGAAACAG 1939
|| || |||||| ||| | |||||||||||||||||||||||||||||||||||||| |
Sbjct 1809 -AAAGGACATACTGCAGAAGCTGAAAGAAAAAGATGTCTTGGTGGTATGCGGAGAAACTG 1867
Query 1940 GCTCTGGAAAGACTACACAGGTTCCCCAATTTATATTGGATGATATGATTGATTCAGGGC 1999
| || |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||
Sbjct 1868 GTTCCGGAAAGACTACACAGGTTCCTCAATTTATACTGGATGATATGATCGATTCAGGGC 1927
Query 2000 ATGGTGGATACTGTAATATCATATGCACACAACCTCGGCGGATAGCGGCTATCTCTGTTG 2059
||||||||||||||||||| |||||||||||||||||| | | |||| ||||||
Sbjct 1928 ATGGTGGATACTGTAATATTATATGCACACAACCTCGG-G-----C---TATCACTGTTG 1978
Query 2060 CTCAAAGAGTTGCTGATGAGCGTTGTGAATCCTC-TCCAGGCT-CAGATGACTCCT-TGG 2116
|||||||||||||||||||||| |||||| |||| |||||||| | || |||| | |||
Sbjct 1979 CTCAAAGAGTTGCTGATGAGCGCTGTGAA-CCTCCTCCAGGCTTC-GACAACTC-TGTGG 2035
Query 2117 TTGGGTATCAAGTTCGTCTTGAAAGTGCAAGGAGTGACAAGACTAGGCTGCTGTTTTGTA 2176
||| ||||||||||||| | ||| |||||||||||| ||||| ||||||||||||||||
Sbjct 2036 TTGCTTATCAAGTTCGTCATCAAAATGCAAGGAGTGATAAGACAAGGCTGCTGTTTTGTA 2095
Query 2177 CTACTGGCATTCTACTGAGGAAACTCGCTGGGG-ATAAAACCTTGAACGATGTTACACAT 2235
||||||| || |||||||| ||||| | ||||| ||| |||||||| ||||||||||||
Sbjct 2096 CTACTGGAATCCTACTGAGAAAACTTG-TGGGGGATACGACCTTGAAAGATGTTACACAT 2154
Query 2236 ATTATAGTCGATGAAGTGCATGAGCGGTCTCTTTTGGGTGATTTTCTTCTCATTATTTTG 2295
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2155 ATTATAGTCGATGAAGTGCATGAGCGGTCTCTTATGGGTGATTTTCTTCTCATTATTTTG 2214
Query 2296 AAGACCCTGATTGAGAAGCAATCATGTGATAATACATCACGTAAACTTAAAGTTATCCTT 2355
|||| |||||||||||||||||| || ||||| ||| || |||||| ||||||||||||
Sbjct 2215 AAGAGCCTGATTGAGAAGCAATCCTGGGATAACGCATTACCTAAACTAAAAGTTATCCTT 2274
Query 2356 ATGTCTGCTACTGTTGACGCTGATCTA-TTCTCAAGATATTTTGGCCATTGTCCTGTGAT 2414
||||| ||||||||||| || ||| | ||||||||||||||||| || |||||| | ||
Sbjct 2275 ATGTCCGCTACTGTTGATGCACATC-AGTTCTCAAGATATTTTGGTCAATGTCCTATAAT 2333
Query 2415 AACTGCTCAAGGACGAACACATCCAGTCACTACCCACTTCCTGGAGGAGATTTATGAGAG 2474
||||||||||||||||| || || || || || |||| |||||||| |||||||||||
Sbjct 2334 TACTGCTCAAGGACGAACTCACCCGGTTACCACTTACTTTCTGGAGGACATTTATGAGAG 2393
Query 2475 TATTAACTACCTTCTTGCTCCAGATTCTCCTGCTGCGCTAAGGTCTGATTCATCTATTAA 2534
| ||| |||||||| ||| ||||||| |||||||| ||||| |||||| |||| ||||
Sbjct 2394 GACTAAGTACCTTCTGGCTTCAGATTCACCTGCTGCTCTAAGTTCTGATACATCCATTAC 2453
Query 2535 AGAAAAGCTTGGTTCTGTAAATGACCGTAGGGGAAAAAAGAATCTTGTATTGGCTGGCTG 2594
||| ||||||||||||||||| | || |||||| |||||||| ||| | |||||||||||
Sbjct 2454 AGACAAGCTTGGTTCTGTAAACGTCCCTAGGGGGAAAAAGAACCTTATGTTGGCTGGCTG 2513
Query 2595 GGGCGAC-GATTATTTGCTTTCGGAGGACTGTCTTAAC 2631
||| ||| | ||||||| |||| |||||| ||||||||
Sbjct 2514 GGGAGACAG-TTATTTGGTTTCAGAGGACAGTCTTAAC 2550
Score = 510 bits (276), Expect = 4e-143
Identities = 740/952 (78%), Gaps = 79/952 (8%)
Strand=Plus/Plus
Query 101 AGAAACCTTCTTCAGGTCCTAAGC-TTCAGATTTCGGCAGAGAACGAAGATCGTTTGCGG 159
||||||| ||| || || |||| || | |||||| | || |||||||| ||||| ||
Sbjct 83 AGAAACCATCTAAAGCCCCAAAGCTTTTA-ATTTCGCCGGAAAACGAAGACCGTTTACGA 141
Query 160 CGGCTCTTGCTCAACTCTGGCCGCATCGGTCCTTCGGTTCCGGCTCCAATCAGTAATTCT 219
|||||||||||||||| | |||| | | | ||||| ||||| | | | | | | ||
Sbjct 142 CGGCTCTTGCTCAACTTTCGCCGGA-C-G-CCTTC---TCCGG-T-C-A-CGGCGACGCT 191
Query 220 CTCTCCAAAGCTCAAAAGACAAAGAAACTCAATAATGTCTATGAGAAGCTCTCTTGCGAA 279
||| | |||| |||| |||||||||||||||| |||| ||||| ||||||||||||
Sbjct 192 ATCT-GTTA-CTCAGAAGAGAAAGAAACTCAATAATCTCTACGAGAATCTCTCTTGCGAA 249
Query 280 GG-TTTCGTT-GATGATCAGATTGAGCTCGCTCTCTCTTCTCTTAGAGATGGAGCTACGT 337
|| ||| || ||| |||||||||| |||| |||||| |||||||| |||||||| |||
Sbjct 250 GGGTTT--TTAGATAATCAGATTGAACTCGTTCTCTCCTCTCTTAGGGATGGAGCAACGC 307
Query 338 TTGAGGCTGCACTTGATTGGCTTTGCTTGAACTTGCCGAGTCATGAGTTGCCAGTGAAGT 397
||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |
Sbjct 308 TTGAGACTGCTCTTGATTGGCTTTGCTTGAACTTGCCGAGCCATGAATTGCCAGTGAACT 367
Query 398 TTTCTA-CTGGAGCTTCTCGCTTTCCTACCACAGGAGGTACTGTGG-GTGTGATATCGAT 455
|||||| | || |||||||| |||||| |||||||| || |||||| | ||||||||||
Sbjct 368 TTTCTAACGGG-GCTTCTCGTTTTCCTTCCACAGGACGTTCTGTGGCG-GTGATATCGAA 425
Query 456 CTCACGGGATGATTGGAATGAATCTGCTGACTCTTCAGTCCAGGTAGAGG--A-GGAGGA 512
||| | | |||||||||| |||||||| || |||||||| ||||| | |||||
Sbjct 426 ATCAAAGAAAGATTGGAATGTGTCTGCTGAATCATCAGTCCA---AGAGGTTAAGGAGGT 482
Query 513 GCCTG---C-G--GTTTTCGTTCGAGTGAAGGGCAAACAAGATGA-G--GAAGA---TAC 560
||||| | | ||||| |||||||||||| |||| | |||||| | ||||| ||
Sbjct 483 GCCTGAATCTGAAGTTTTAGTTCGAGTGAAGAGCAAGCGAGATGAAGAAGAAGAAGATAG 542
Query 561 TCTTAATTCCGGCAAATCGTCTCAAGCTGATTGGATTCGTCAGTATATGATGAGACAGGA 620
||||| ||| || || | ||||||||||||||||| | ||||||||||| |||| |||
Sbjct 543 TCTTAGTTCTTGCCAACCATCTCAAGCTGATTGGATCCATCAGTATATGAAAAGACTGGA 602
Query 621 AGAGGAAGAATTGGAATGTTGGGAAGATGAGGTAGATGGTATTGACCCCGGAAAGAAGGT 680
|||||| |||||||||| || || |||||| ||| | || | | | | |
Sbjct 603 AGAGGAGGAATTGGAATCTTCCGACGATGAG--AGA-G--AT--A------A--G--G-T 644
Query 681 ATCTGGTCCAAGGCCATTCGATGTGATTGCCAAAGAATATTAT-TCGGCAAGGTCAGA-T 738
||||||||||||| | ||||| ||||||||||||||||||| | | | ||| | | | |
Sbjct 645 ATCTGGTCCAAGGTCTTTCGAAGTGATTGCCAAAGAATATTGTGTAGA-AAGAT-ATAAT 702
Query 739 GCTATAAAAGCTAAGGAG-AAGCGTGATAAAAGAGGACAGGAGC-AAGCAGGCCTAGCAA 796
||||||||||| ||| || ||| |||||||||| |||||| ||| ||||||||||||| |
Sbjct 703 GCTATAAAAGCAAAG-AGGAAGGGTGATAAAAGTGGACAG-AGCCAAGCAGGCCTAGCCA 760
Query 797 TTCGGAAGCTCAAGCAAGAGAT-ATCTGATCTTGGGTTATCAGAAGCAATGTTGGAATCT 855
|| | ||||||||| ||||||| | || ||||||| ||||||||||| |||||||||
Sbjct 761 TTTGCAAGCTCAAGGAAGAGATGAA-TGCTCTTGGGCCGTCAGAAGCAATATTGGAATCT 819
Query 856 GAATTTCAGCGTGAACAT---GCTTTTGAAAGTGCTACAGAACAAGAA-TCAACGTGTCC 911
|| ||||||||||| | | | || |||| | |||| |||| ||||| | | | | ||
Sbjct 820 GAGTTTCAGCGTGATCGTCAAGATTGTGAAGGCGCTAGAGAAAAAGAAGT-AGCCT--CC 876
Query 912 -CATTTCCA--ATAACCTTCATGAGTCAGTTGATGCTGACGATGTCTCTGTTCAGCAGTT 968
| | | | || || ||||||||||||| ||||||| | | ||| | |||||| ||
Sbjct 877 TC-TGTGCTTGATGACGTTCATGAGTCAGTAAATGCTGATGCTTTCTTTTTTCAGCTTTT 935
Query 969 AGATAACTTGACCTTAGATGCCAATCCTGCTGGGAGCTGTGAGTCTGAGGAA 1020
||| |||||||||| ||| | ||||||| |||||||||| | |||||||||
Sbjct 936 TGATGACTTGACCTTGGATACAAATCCTGTTGGGAGCTGTAAATCTGAGGAA 987
> AT1G18410.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:6336528-6342460
REVERSE LENGTH=3423
Length=3423
Score = 418 bits (226), Expect = 2e-115
Identities = 258/273 (95%), Gaps = 4/273 (1%)
Strand=Plus/Plus
Query 844 ATGTTGGAATCTGAATTTCAGCGTGAACATGCTTTTGAAAGTGCTACAGAACAAGAATCA 903
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1 ATGTTGGAATCTGAATTTCAGCGTGAACATGCTTTTGAAAGTGCTACAGAACAAGAATTA 60
Query 904 ACGTGTCCCATTTCCAATAACCTTCATGAGTCAGTTGATGCTGACGATGTCTCTGTTCAG 963
|| |||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 61 ACCTGTCCCATTTCCGATAACCTTCATGAGTCAGTTGAGGCTGACGATGACTCTGTTCAG 120
Query 964 CA-GTTAGATAACTTGACCTTAGA-TGCCAATCCTGCTGGGAGCTGTGAGTCTGAGGAAA 1021
| ||||||||| |||||||| || | |||||||||||| ||||||||||||||||||||
Sbjct 121 -ATGTTAGATAATTTGACCTT-GAATACCAATCCTGCTGAGAGCTGTGAGTCTGAGGAAA 178
Query 1022 TTCAAACTAAAGCTCTTCCTTCAAGTTCCTCAGGACAAGATTTAGTTGCATCGGATGAAG 1081
||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||
Sbjct 179 TTCAAACTAAAGCTCTTCCCTCAAGTTCCTCGGGACAAGATTTAGTTGCATCAGATGAAG 238
Query 1082 ATTCAGAGGACGTGGAACTTGGCGATACATTCT 1114
|||||||||||||||||||||||||||||||||
Sbjct 239 ATTCAGAGGACGTGGAACTTGGCGATACATTCT 271
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 220483714485
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5