BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925210 Length=313 Score E Sequences producing significant alignments: (Bits) Value AT5G36805.1 | Symbols: | Plant thionin family protein | chr5:1... 270 5e-72 AT5G36720.1 | Symbols: | Plant thionin family protein | chr5:1... 270 5e-72 AT5G34828.1 | Symbols: | Plant thionin family protein | chr5:1... 257 4e-68 AT5G38378.1 | Symbols: | Plant thionin family protein | chr5:1... 257 4e-68 AT3G24465.1 | Symbols: | Plant thionin family protein | chr3:8... 257 4e-68 > AT5G36805.1 | Symbols: | Plant thionin family protein | chr5:14488961-14489224 REVERSE LENGTH=264 Length=264 Score = 270 bits (146), Expect = 5e-72 Identities = 231/270 (86%), Gaps = 13/270 (5%) Strand=Plus/Plus Query 21 ATGGCGACTCAAGCAATGAAAAATATATACAGTTG-TTTGATGATTGTAGTTTTATTTAT 79 ||||| |||||| |||| ||||| |||||||| || ||||||||||||||||||||| | Sbjct 1 ATGGCAACTCAAACAATAAAAAAGATATACAG-TGTTTTGATGATTGTAGTTTTATTAAC 59 Query 80 GATGATGGTTTTAACATATGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGAA 139 |||||| |||| |||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 60 GATGATTGTTTCAACATACGCGAGTACGGTGGAAGTATGTGTTAAGCATTGTGTCCCGAA 119 Query 140 TCAGTGCATGAAAGTTTCTCAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCAAAAA 199 ||| |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| Sbjct 120 TCAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACAAA 179 Query 200 ATTCTGCAACCAAAACAAATTTTCTCATGACAAACACATCGTGCCTCGAAGTT-CTTGCG 258 | ||||||| |||||||| | |||| || | ||||||||||||||| || || Sbjct 180 ACTCTGCAATGAAAACAAA----C--ATGAGGAATATGTCGTGCCTCGAAGTTACT-GCA 232 Query 259 ACGGATTATTCAGCTGGTTACTATGTAATA 288 | ||||||||| ||||| |||||| ||| Sbjct 233 ATGGATTATTC---TGGTTTCTATGTGATA 259 > AT5G36720.1 | Symbols: | Plant thionin family protein | chr5:14429661-14429924 REVERSE LENGTH=264 Length=264 Score = 270 bits (146), Expect = 5e-72 Identities = 231/270 (86%), Gaps = 13/270 (5%) Strand=Plus/Plus Query 21 ATGGCGACTCAAGCAATGAAAAATATATACAGTTG-TTTGATGATTGTAGTTTTATTTAT 79 ||||| |||||| |||| ||||| |||||||| || ||||||||||||||||||||| | Sbjct 1 ATGGCAACTCAAACAATAAAAAAGATATACAG-TGTTTTGATGATTGTAGTTTTATTAAC 59 Query 80 GATGATGGTTTTAACATATGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGAA 139 |||||| |||| |||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 60 GATGATTGTTTCAACATACGCGAGTACGGTGGAAGTATGTGTTAAGCATTGTGTCCCGAA 119 Query 140 TCAGTGCATGAAAGTTTCTCAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCAAAAA 199 ||| |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| Sbjct 120 TCAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACAAA 179 Query 200 ATTCTGCAACCAAAACAAATTTTCTCATGACAAACACATCGTGCCTCGAAGTT-CTTGCG 258 | ||||||| |||||||| | |||| || | ||||||||||||||| || || Sbjct 180 ACTCTGCAATGAAAACAAA----C--ATGAGGAATATGTCGTGCCTCGAAGTTACT-GCA 232 Query 259 ACGGATTATTCAGCTGGTTACTATGTAATA 288 | ||||||||| ||||| |||||| ||| Sbjct 233 ATGGATTATTC---TGGTTTCTATGTGATA 259 > AT5G34828.1 | Symbols: | Plant thionin family protein | chr5:13094069-13094344 REVERSE LENGTH=276 Length=276 Score = 257 bits (139), Expect = 4e-68 Identities = 187/210 (89%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 21 ATGGCGACTCAAGCAATGAAAAATATATACAGTTG-TTTGATGATTGTAGTTTTATTTAT 79 |||||||||||| |||| ||||| |||||||| || |||||| ||||||| |||||||| Sbjct 1 ATGGCGACTCAAACAATAAAAAAGATATACAG-TGTTTTGATCATTGTAGCTTTATTTAC 59 Query 80 GATGATGGTTTTAACATATGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGAA 139 ||||||||||| ||||| |||||||||| | ||| | |||||||| ||||||||||| || Sbjct 60 GATGATGGTTTCAACATTTGCGAGTACGATAGAAATATGTGTTAAACATTGTGTCCCAAA 119 Query 140 TCAGTGCATGAAAGT-TTCTCAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCAAAA 198 ||||||||| ||||| || | ||||||||||||||||||||||||||||||||||||||| Sbjct 120 TCAGTGCATAAAAGTGTT-TAAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCAAAA 178 Query 199 AATTCTGCAACCAAAACAAATTTTCTCATG 228 || |||||||||| ||||||||| |||||| Sbjct 179 AACTCTGCAACCAGAACAAATTTGCTCATG 208 > AT5G38378.1 | Symbols: | Plant thionin family protein | chr5:15344448-15344711 FORWARD LENGTH=264 Length=264 Score = 257 bits (139), Expect = 4e-68 Identities = 233/276 (84%), Gaps = 15/276 (5%) Strand=Plus/Plus Query 21 ATGGCGACTCAAGCAATGAAAAATATATACAGTTG-TTTGATGATTGTAGTTTTATTTAT 79 ||||| |||||| |||| ||||| |||||||| || ||||||||||||||||||||||| Sbjct 1 ATGGCAACTCAAACAATAAAAAAGATATACAG-TGTTTTGATGATTGTAGTTTTATTTAC 59 Query 80 GATGATGGTTTTAAC-ATATGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGA 138 ||||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||| Sbjct 60 GATGATGGTTTCAACCA-ACGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGA 118 Query 139 ATCAGTGCATGAAAGTTTCTCAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCAAAA 198 | || ||||||||||||||||| |||||||||||||| |||||||||| |||||||| || Sbjct 119 ACCAATGCATGAAAGTTTCTCAGAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACAA 178 Query 199 AATTCTGCAACCAAAACAAATTTTCTCATGACAAACACATCGTGCCTCGAAGTT-CTTGC 257 || ||||||| |||||||| | |||| || | |||||||||| |||| || | Sbjct 179 AACTCTGCAATGAAAACAAA----C--ATGAGGAATATGTCGTGCCTCGGAGTTACT-GT 231 Query 258 GACGGATTATTCAGCTGGTTACTATGTAATAAGTGA 293 || |||||||| ||||| |||||| |||| ||| Sbjct 232 GAGGGATTATTT---TGGTTTCTATGTGATAATTGA 264 > AT3G24465.1 | Symbols: | Plant thionin family protein | chr3:8894877-8895140 REVERSE LENGTH=264 Length=264 Score = 257 bits (139), Expect = 4e-68 Identities = 233/276 (84%), Gaps = 15/276 (5%) Strand=Plus/Plus Query 21 ATGGCGACTCAAGCAATGAAAAATATATACAGTTG-TTTGATGATTGTAGTTTTATTTAT 79 ||||| |||||| ||| ||||| |||||||| || ||||||||||||||||||||||| Sbjct 1 ATGGCAACTCAAACAACAAAAAAGATATACAG-TGTTTTGATGATTGTAGTTTTATTTAC 59 Query 80 GATGATGGTTTTAACATATGCGAGTACGGTGGAAGTGTGTGTTAAGCATTGTGTCCCGAA 139 |||||| |||| |||||| ||||||||| |||||||||||||||| || ||| ||||||| Sbjct 60 GATGATTGTTTCAACATACGCGAGTACGATGGAAGTGTGTGTTAAACACTGTATCCCGAA 119 Query 140 TCAGTGCATGAAAGTTTCTCAAAAGGCAACTCTTCCTTTATGTGAGAATGCTTGCAAAAA 199 ||| |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| Sbjct 120 TCAATGCATGAAAGTTTCTCAAAAGGCAACTCTTCCATTATGTGAGACTGCTTGCACAAA 179 Query 200 A-TTCTGCAACCAAAACAAATTTTCTCATGACAAACACATCGTGCCTCGAAGTT-CTTGC 257 | || ||||| |||||||| |||| ||| | |||||||||||||| | || || Sbjct 180 ACTT-TGCAATGAAAACAAAG------ATGAGAAATATATCGTGCCTCGAAGCTACT-GC 231 Query 258 GACGGATTATTCAGCTGGTTACTATGTAATAAGTGA 293 || ||||||||| ||||| |||||| |||| ||| Sbjct 232 GATGGATTATTC---TGGTTTCTATGTGATAACTGA 264 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14527379461 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5