BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925249 Length=514 Score E Sequences producing significant alignments: (Bits) Value AT1G57850.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 728 0.0 > AT1G57850.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain family protein | chr1:21426690-21427349 FORWARD LENGTH=477 Length=477 Score = 728 bits (394), Expect = 0.0 Identities = 451/477 (95%), Gaps = 10/477 (2%) Strand=Plus/Plus Query 21 ATGACGATTTCGTCTCTCACCGATGAC-AC--CCATCGAGTATTCCTCAGTTTCCGAGGA 77 |||||||||| ||||||| || ||||| || |||||||||||||||||||||||||||| Sbjct 1 ATGACGATTTTGTCTCTCGCCAATGACGACTTCCATCGAGTATTCCTCAGTTTCCGAGGA 60 Query 78 GATCAGTTGCGCTATAGCTTCGTCAGCCACCTTCTTGATGCCTTTAAGAGACATGGAATC 137 |||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||||| Sbjct 61 GATCAGTTGCGCTACAGCTTTGTCAGCCACCTTCTTGACGCCTTTGAGAGACATGGAATC 120 Query 138 TTGTGTTTCGTACACAAAGACGAGCATCTAAGGGGAAAAAACATGACAAACCTTTTTGTA 197 |||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 121 TTGTGTTTTGTAGACAAAGACGAG---CTAAGGGGAAAAACCATGACAAACCTTTTTGTA 177 Query 198 AGGATTAAAGAGTCGAAGATCGCGCTAGTTATCTTCTCTAGTAGGTATGCGGAGTCGAGT 257 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 178 AGGATTAAAGAGTCGAAGATCGCACTAGTTATCTTCTCTAGTAGGTATGCGGAGTCGAGT 237 Query 258 TGGTGCATGGATGAGCTGGTGAAGATGAAGAAACGTGTGGATAAAGGAAAGCTCCAAGTC 317 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 238 TGGTGCATGGATGAGCTGGTGAAGATGAAGAAACGTGCGGATAAAGGAAAGCTCCAAGTC 297 Query 318 ATTCCCATCTTCTACAAGGTTAGGGCAAGAGATGTGAGAGGACAGACCGGTGAGTTTGGT 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 ATTCCCATCTTCTACAAGGTTAGGGCAAGAGATGTGAGAGGACAGACCGGTGAGTTTGGT 357 Query 378 GACAA-GTTTTGGGCGCTTGCGAAGA-CTTCCCGAGTAGATCAGATCATGGAGTGGAAGG 435 || || ||||||||||||||| |||| |||| |||| ||||||||||||||||||||||| Sbjct 358 GA-AACGTTTTGGGCGCTTGC-AAGAACTTCTCGAGGAGATCAGATCATGGAGTGGAAGG 415 Query 436 AAGCCCTAGAGTGTATTTCCAACAAGATGGGTCTGTCCTTGGGAGACAAAAGGTACT 492 |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 416 AAGCGCTAGAGTGTATTTCCAACAAGATGGGCCTGTCCTTGGGAGACAAAAGGTACT 472 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24564497883 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5