BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925251 Length=236 Score E Sequences producing significant alignments: (Bits) Value AT1G57980.1 | Symbols: | Nucleotide-sugar transporter family p... 268 1e-71 AT1G57943.1 | Symbols: ATPUP17, PUP17 | purine permease 17 | ch... 259 7e-69 AT1G57990.1 | Symbols: ATPUP18, PUP18 | purine permease 18 | ch... 200 5e-51 > AT1G57980.1 | Symbols: | Nucleotide-sugar transporter family protein | chr1:21439232-21440805 REVERSE LENGTH=1470 Length=1470 Score = 268 bits (145), Expect = 1e-71 Identities = 206/233 (88%), Gaps = 13/233 (6%) Strand=Plus/Plus Query 8 ACCAGAGAAAACTTATGGAGATGAGCC-AAGCTTCTAAACAGACAACAATACATGAAGAA 66 ||||||||||||| |||||||||| || ||||||| ||||| ||||||| |||||||||| Sbjct 60 ACCAGAGAAAACTCATGGAGATGA-CCGAAGCTTCCAAACATACAACAACACATGAAGAA 118 Query 67 TCAGAACATGTTCAGAATCCAGAACCAGACCAAATCTTCAGTCC-AAGAAGATC-GTTGG 124 |||||||||||||||||||| |||||||||||| |||| || || ||| | | | |||| Sbjct 119 TCAGAACATGTTCAGAATCCTGAACCAGACCAAGTCTTGAG-CCAAAG-ACAACTGTTGC 176 Query 125 AGCTCAATCAAAAGAAATGGTGGATCTCTGTTGC-GCTATGTCTTTTCTTAGTCCTGCTT 183 |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct 177 AGCTAAATCAAAAGAAATGGTGGATCTCTGTT-CTAATATGTCTTTTCTTAGTCCTGCTT 235 Query 184 GGAGATTCTCTCGTCATGCGATGCTTCTCTTGAACTTCTTCTATGTTCAAGAC 236 ||||||||||| ||||| | |||||||||||||||||||||||||||||| Sbjct 236 GGAGATTCTCTTGTCAT---A--CTTCTCTTGAACTTCTTCTATGTTCAAGAC 283 > AT1G57943.1 | Symbols: ATPUP17, PUP17 | purine permease 17 | chr1:21437602-21438889 REVERSE LENGTH=1197 Length=1197 Score = 259 bits (140), Expect = 7e-69 Identities = 191/214 (89%), Gaps = 9/214 (4%) Strand=Plus/Plus Query 22 ATGGAGATGAGCC-AAGCTTCTAAACAGACAACAATACATGAAGAATCAGAACATGTTCA 80 ||||||||| || ||||||| ||||||||||||| |||||||||||||||||| ||||| Sbjct 1 ATGGAGATG-TCCAAAGCTTCCAAACAGACAACAAGACATGAAGAATCAGAACACGTTCA 59 Query 81 GAATCCAGAACCAGACCAAATCTTCAGTCCAAGAAGATCGTTGGAGCTCAATCAAAAGAA 140 |||||||||||||||||||||||| ||||||||||||||||||||||| || |||| ||| Sbjct 60 GAATCCAGAACCAGACCAAATCTTGAGTCCAAGAAGATCGTTGGAGCTAAAACAAA-GAA 118 Query 141 A-TGGTGGATCTCTGTTGCGCTATGTCTTTTCTTAGTCCTGCTTGGAGATTCTCTCGTCA 199 | ||||||||||||||| | ||||||||||||||||| | || |||||||||||||||| Sbjct 119 AATGGTGGATCTCTGTTTCTTTATGTCTTTTCTTAGTCTTACTCGGAGATTCTCTCGTCA 178 Query 200 TGCGATGCTTCTCTTGAACTTCTTCTATGTTCAA 233 ||| | | |||||||||||||||||||| ||| Sbjct 179 TGC--T--T-CTCTTGAACTTCTTCTATGTCCAA 207 > AT1G57990.1 | Symbols: ATPUP18, PUP18 | purine permease 18 | chr1:21441505-21442920 REVERSE LENGTH=1416 Length=1416 Score = 200 bits (108), Expect = 5e-51 Identities = 188/223 (84%), Gaps = 19/223 (9%) Strand=Plus/Plus Query 15 AAAACTTATGGAGATGAGCC-AAGCTTCTAAACAGACAACAATACATGAAGAATCAGAAC 73 |||| | |||||||||| || ||||||| ||||||||||| | || |||| || | Sbjct 42 AAAAATCATGGAGATGA-CCGAAGCTTCCAAACAGACAAC-A-GCA-GAAG-----GATC 92 Query 74 ATGTTCAGAATCCAGAACCAGACCAAATCTTCAGTCCAAGAAGATCGTTGGAGCTCAATC 133 | | || ||||||||||||||||||||||| ||||| ||||||||||||||||| || | Sbjct 93 A-G--CA-AATCCAGAACCAGACCAAATCTTGAGTCCGAGAAGATCGTTGGAGCTAAAAC 148 Query 134 AAAAGAAATGGTGGATCTCTGTTGCGCTATGTCTTTTCTTAGTCCTGCTTGGAGATTCTC 193 ||||||||||||||||||||||| | ||||| ||||||||||| |||| |||||||||| Sbjct 149 AAAAGAAATGGTGGATCTCTGTTTCTTTATGTATTTTCTTAGTCTTGCTCGGAGATTCTC 208 Query 194 TCGTCATGCGATGCTTCTCTTGAACTTCTTCTATGTTCAAGAC 236 | ||||||| | | ||||||||||||||||||||||||||| Sbjct 209 TAGTCATGC--T--T-CTCTTGAACTTCTTCTATGTTCAAGAC 246 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 10656762788 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5