BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925371 Length=373 Score E Sequences producing significant alignments: (Bits) Value AT2G37585.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylg... 291 4e-78 > AT2G37585.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr2:15765784-15767878 FORWARD LENGTH=1391 Length=1391 Score = 291 bits (157), Expect = 4e-78 Identities = 198/218 (91%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 13 AAATCGAATCATGAAAAGATCTCACATTTCTTCTCCTCGTTCTTATTCTCGACCAGCGAT 72 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 71 AAATCGAATCATGAAAAGATCTCACATTTCGTCTCCTCGTTCTTATTCACGACCAGCGAT 130 Query 73 TTCAATCTTCAGTGTTTTCCTCTTGTTTCTTCTGGGTTTAACACTAA-CTTCTCGAAAAC 131 |||||||||| |||| ||||||||||||||||||| ||||||||||| || ||||||||| Sbjct 131 TTCAATCTTCGGTGTCTTCCTCTTGTTTCTTCTGGTTTTAACACTAAGCT-CTCGAAAAC 189 Query 132 CATCAGATCCATCCTTCTGTTTAGCTCCAAATCGGAACTTATCCAGAATATCGAAGATTC 191 |||||||| |||||| | |||||||||||||||| |||||| ||| || ||||| ||||| Sbjct 190 CATCAGATTCATCCTCCGGTTTAGCTCCAAATCGAAACTTAGCCACAAAATCGACGATTC 249 Query 192 CGAAGCTCACGTATTTGGTAACGGGGACGAAAGGAGAT 229 ||| | | |||||||||||||||| |||||||||||| Sbjct 250 CGAGGTTTGCGTATTTGGTAACGGGAACGAAAGGAGAT 287 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17543444401 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5