BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925381 Length=320 Score E Sequences producing significant alignments: (Bits) Value AT1G65113.1 | Symbols: SCRL2 | SCR-like 2 | chr1:24189464-24190... 368 2e-101 > AT1G65113.1 | Symbols: SCRL2 | SCR-like 2 | chr1:24189464-24190026 FORWARD LENGTH=468 Length=468 Score = 368 bits (199), Expect = 2e-101 Identities = 265/295 (90%), Gaps = 11/295 (4%) Strand=Plus/Plus Query 24 ATGAAATGCGGTGTTCTGTTTATGGTTTCTTGTCTTC---TCACATTCCTCGTTCTCAGC 80 |||||||| |||||| |||||||| |||||||||||| |||||||||| ||||||||| Sbjct 1 ATGAAATGTGGTGTTTTGTTTATGATTTCTTGTCTTCTGATCACATTCCTTGTTCTCAGC 60 Query 81 CATGTTAGAGTGGTGGAATCCAAAACAAAATGGGGATGCGACATGAACAGGTCTTTTCCT 140 |||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 61 CATGTTAGAGAGGTGGAATCCAAAACAAAATGGGGATGCGACATGAACAGACCATTTCCA 120 Query 141 GGACAGTGCGGACCTAATGGAAAGAATACATGCATAAGCGACAT-aaaaaaaTTGCCTGG 199 ||| |||| ||| ||||||||||| ||||||||||||||||||| |||||||| |||||| Sbjct 121 GGAAAGTGTGGAACTAATGGAAAGGATACATGCATAAGCGACATCAAAAAAAT-GCCTGG 179 Query 200 TGCACCAAAAGATCTTGTCGTACGTTGCGAATGTTCTGC--CGCTTTTGTTTGGCCGGGT 257 ||| ||||||||||||||||||||||||||||||||| | || |||||||||| |||| Sbjct 180 TGCGCCAAAAGATCTTGTCGTACGTTGCGAATGTTCT-CAACG-TTTTGTTTGGAAGGGT 237 Query 258 CAACCTCCCCG-GCGTTTATGTAAATGTCAATATGATTGTTAAGTTTTACTATAT 311 | |||||| | |||||||||||||||||||||||||||||||| |||||||||| Sbjct 238 TACCCTCCC-GAGCGTTTATGTAAATGTCAATATGATTGTTAAGCTTTACTATAT 291 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14879253704 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5