BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg925419
Length=1126
Score E
Sequences producing significant alignments: (Bits) Value
AT1G65190.1 | Symbols: | Protein kinase superfamily protein | ... 747 0.0
AT5G35796.1 | Symbols: | pseudogene, similar to Putative prote... 734 0.0
AT1G65250.1 | Symbols: | Protein kinase superfamily protein | ... 734 0.0
AT1G67470.1 | Symbols: | Protein kinase superfamily protein | ... 726 0.0
> AT1G65190.1 | Symbols: | Protein kinase superfamily protein
| chr1:24215644-24217328 REVERSE LENGTH=1685
Length=1685
Score = 747 bits (404), Expect = 0.0
Identities = 611/706 (87%), Gaps = 34/706 (5%)
Strand=Plus/Plus
Query 87 GAGAGAGGAGCCAAGTTGTTA-ACAGATCTGATCGAAT-TCGGCCATGGCATATCCAATC 144
||||||||||||||||||||| | ||| || ||||||| | || |||||| ||||||||
Sbjct 159 GAGAGAGGAGCCAAGTTGTTAGA-AGAGCTCATCGAATGT-TGCGATGGCAAATCCAATC 216
Query 145 CCATCAAATTCTTCTCTGCTGATGAGATCCTCAAAGCCACCAACAATTTCAGCGACAT-T 203
|||||||||||||||||||||||||||||| |||||||||||||| ||||||| || | |
Sbjct 217 CCATCAAATTCTTCTCTGCTGATGAGATCCGCAAAGCCACCAACATTTTCAGCCAC-TCT 275
Query 204 AATCGTGTTTC-TCGA-TTAG-CTTATTACT-CCGATTGGTATTCAGGTAAGAACGAGAA 259
|||| || ||| || | || || ||||| || | |||||||||||||||||||||||
Sbjct 276 AATCTTG-TTCATC-AGGAAGAATT-TTACTGCC-AATGGTATTCAGGTAAGAACGAGAA 331
Query 260 CCATCCCATGATACTCATCAAGAAAGGTGCTAACTTTTGGAGCTCGAGAGTAGATCTTTT 319
|||||||||||||||||||| ||||| | |||| | | | || ||| | ||||||| |
Sbjct 332 CCATCCCATGATACTCATCAGGAAAGATTCTAA-TGT-G-AGGG-GAG-G-AGATCTTGT 385
Query 320 GTGCCGGGACATAGCAGTTTCATCGATGGTGAGTGGTCACAAAAACTTTTTGAAATTGGT 379
|||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 386 GTGCCGCAACATAGCAGTTTCATCGATGGTGAGTGGTCACAAGAACTTTATGAAATTGGT 445
Query 380 TGGATGTTGTCTTGAGTCTGAAG-AGCCAGTCATGGTTTATAACGGTGTTAAGAAACACT 438
||||||||||||||||| |||| | ||||||| ||| ||| | |||||||||||||| |
Sbjct 446 TGGATGTTGTCTTGAGT-TGAAATATCCAGTCACGGTCTATCATGGTGTTAAGAAACATT 504
Query 439 ATCGATTAGATATAGATGAGCAGCCGTGGAAAAGGAGAATGAAGATAGCAGAAGATATCG 498
|| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 505 ATGGATTAGAAATAGATGAGAAGCCGTGGAAAAGAAGAATGAAGATAGCAGAAGATATCG 564
Query 499 CTACTGCTTTTGCTTACCTTCACACTGCCTTCCCAAGGCCCTTCGTATATAGGATTTTGT 558
| |||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||
Sbjct 565 CCACTGCTTTAGCTTACCTTCACACTGCCTTCCCTAGGCCCCTCGTATATATGATTTTGT 624
Query 559 ATCCTTGGAATATCTTATTGGATGAAGATGGGGTCGCGAAGCTGACTGATTTCTCTCTCT 618
|| | ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 625 CTCATCGGAATATCTTATTGGATGAAGATGGTGTCGCGAAGCTGACTGATTTCTCTCACT 684
Query 619 GCGTCTCAATCCCAGAAGGAGAAACATTTGTTAAGGTTGA--CA-AAG-T-----CTACA 669
||||||||||||||||||||||||||||||| |||||| || ||| | ||| |
Sbjct 685 GCGTCTCAATCCCAGAAGGAGAAACATTTGTCCGGGTTGAGGCAGAAGATGGATTCTATA 744
Query 670 GTTACTTGTATTTTTA-TGACGATAGCAGTGGCGTAGTATCAGAGAAAACAGATGTCTTT 728
||||||| | | || | ||| || ||||| ||||| |||||||||||||||||||||
Sbjct 745 GTTACTT-TGCTGATAATTACGTTAACAGTGTTGTAGTCTCAGAGAAAACAGATGTCTTT 803
Query 729 GCCTTTGGAATGTTTATGGGTCTAACGCTTCTATTAGGAAAACAAA 774
||||||||||| ||||||||||||||||||||||||||| | ||||
Sbjct 804 GCCTTTGGAATCTTTATGGGTCTAACGCTTCTATTAGGATA-CAAA 848
> AT5G35796.1 | Symbols: | pseudogene, similar to Putative protein
kinase, blastp match of 29% identity and 1.6e-16 P-value
to GP|21671940|gb|AAM74302.1|AC083944_20|AC083944 Putative
protein kinase {Oryza sativa (japonica cultivar-group)} | chr5:13968537-13969932
REVERSE LENGTH=1396
Length=1396
Score = 734 bits (397), Expect = 0.0
Identities = 616/718 (86%), Gaps = 30/718 (4%)
Strand=Plus/Plus
Query 72 TCCGATATAGTGTCTGAGAGAGGAGCCAAGTTGTTA-ACAGATCTGATCGAATTCGGCCA 130
|||| || |||| | ||||||| |||||||||||| | ||| || ||||||||||||||
Sbjct 66 TCCGGTAGAGTGGCCAAGAGAGGGGCCAAGTTGTTAGA-AGAGCTCATCGAATTCGGCCA 124
Query 131 TGGCATATCCAATCCCATCAAATTCTTCTCTGCTGATGAGATCCTCAAAGCCACCAACAA 190
||||| |||||||||||||||||||||||||| ||||||||||| ||| |||||||||||
Sbjct 125 TGGCAAATCCAATCCCATCAAATTCTTCTCTGGTGATGAGATCCGCAATGCCACCAACAA 184
Query 191 TTTCAGCGACATTAATCGTGTTTCTCGATTAG-CTTATTACT-CCGATTGGTATTCAGGT 248
|||||||||| ||||| |||||||||| || || ||||| || | ||||||||||||
Sbjct 185 TTTCAGCGAC--TAATCTTGTTTCTCGAAAAGAATT-TTACTACC-ACTGGTATTCAGGT 240
Query 249 AAGAACGAGAACCATCCCATGATACTCATCAAGAAAGGTGC-TAACTTTTGGAG-CTC-- 304
||||||||||||||||||||||| ||||| ||||||| | | | ||| | ||| |||
Sbjct 241 AAGAACGAGAACCATCCCATGATTCTCATTAAGAAAGAT-CTTGGCTTGTCGAGTCTCTT 299
Query 305 GAGAGTAGATCTTTTGTGCCGGGACATAGCAGTTTCATCGATGGTGAGTGGTCACAAAAA 364
| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 300 CAAAGTAGATCTTTTGAGCCGCGACATAGCAGTTTCATCGATGGTGAGTGGTCACAAAAC 359
Query 365 CTTTTTGAAATTGGTTGGATGTTGTCTTGAGTCTGAAGAGCCAGTCATGGTTTATAACGG 424
|||||||||||||||||||||||||||||||| |||||| |||||| |||||| | ||
Sbjct 360 CTTTTTGAAATTGGTTGGATGTTGTCTTGAGTTTGAAGATTCAGTCAAAGTTTATCATGG 419
Query 425 TGTTAAGAAACACTATC-GATTAGATAT-AGATGAGCAGCCGTGGAAAAGGAGAATGAAG 482
|||||||||||| || | |||||| || || ||| || || ||||||||||||||||||
Sbjct 420 TGTTAAGAAACATTA-CAAATTAGAAATAAG-TGAACATCCATGGAAAAGGAGAATGAAG 477
Query 483 ATAGCAGAAGATATCGCTACTGCTTTTGCTTACCTTCACACTGCCTTCCCAAGGCCCTTC 542
|||| |||||||| ||||||||||| ||||||||||||||||| ||||| |||| |||
Sbjct 478 ATAGTTGAAGATATTGCTACTGCTTTAGCTTACCTTCACACTGCGTTCCCTAGGCTCTTT 537
Query 543 GTATATAGGATTTTGTATCCTTGGAATATCTTATTGGATGAAGATGGGGTCGCGAAGCTG 602
|||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||
Sbjct 538 GTATATAGGATTTTGTCTCATTGGAATATTTTATTGGATGAAGATGGGGTCGCGAAGCTG 597
Query 603 ACTGATTTCTCTCTCTGCGTCTCAATCCCAGAAGGAGAAACATTTGTTAAGGTTGA--CA 660
|||||||| |||| |||||||| ||| ||||||||||| |||||||| ||||||| ||
Sbjct 598 ACTGATTTTTCTCACTGCGTCTGAATTCCAGAAGGAGACACATTTGTCCAGGTTGAGGCA 657
Query 661 --A-AG---T-CTACAGTTACTTGTATTTTTA-TGACGAT-AGCAGTGGCGTAGTATCAG 711
| || | ||| |||||||| | || | || || |||||||||||||| ||||
Sbjct 658 GCAGAGGGATTCTATAGTTACTT-TGCCGATAATTAC-ATTAGCAGTGGCGTAGTCTCAG 715
Query 712 AGAAAACAGATGTCTTTGCCTTTGGAATGTTTATGGGTCTAACGCTTCTATTAGGAAA 769
||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||||
Sbjct 716 AGAGAACAGATGTCTTTGGCTTTGGAATGTTTATGGGTATAAGGCTTCTATTAGGAAA 773
Score = 357 bits (193), Expect = 1e-97
Identities = 261/293 (89%), Gaps = 8/293 (3%)
Strand=Plus/Plus
Query 800 TTTGCAGTCAAAATTAAAGGAAGACCG-TCGAATCGAAGAGATTGCAGATCCAAAGATGC 858
||||| ||||| ||||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct 856 TTTGCTGTCAACATTAAAGGAAGACCGATC-AATGGAAGAGATTGCAGATCCAAAGATGA 914
Query 859 TAGAAAAGATGGGTAATAATATTTCAGAACAAGAGCTTTGTCAAATGGAAGCTTTCCGAA 918
|||||||||||||| | ||| || | ||| ||||||||||||||||| ||||||||||||
Sbjct 915 TAGAAAAGATGGGTCA-AAT-TTCC-GAAGAAGAGCTTTGTCAAATGAAAGCTTTCCGAA 971
Query 919 TGCTCTCACTGAGATGCATCGGTCCTAGGGAAGAAGTTCCAACGATGGTGGAAGTTGCCA 978
|| | |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||
Sbjct 972 TGTTGTCACTGAGATGCATGGGTCCTAGTGAAGAAGTTCCAACGATGGTGGAAGTTGTCA 1031
Query 979 AAGAACTAAAGAAGATTCAAAGATCTCTTTATAACGACTCTTCTTCTCCTTCTGGAG--- 1035
||||||||||||| || ||||||||||||| ||||||||||||||||| |||| ||
Sbjct 1032 AAGAACTAAAGAAAATCCAAAGATCTCTTTTTAACGACTCTTCTTCTCTTTCTTCAGGTC 1091
Query 1036 AAACCCATTTCGACTCTCCCCAAGACATTTCTTCCTCAGTCGTCCTCTCAAAC 1088
||||||| ||| ||||| ||||||||||||||||| |||| ||||||||||||
Sbjct 1092 AAACCCAATTCAACTCTGCCCAAGACATTTCTTCCACAGTGGTCCTCTCAAAC 1144
> AT1G65250.1 | Symbols: | Protein kinase superfamily protein
| chr1:24234338-24235808 FORWARD LENGTH=1471
Length=1471
Score = 734 bits (397), Expect = 0.0
Identities = 667/789 (85%), Gaps = 52/789 (7%)
Strand=Plus/Plus
Query 2 TTAATTCTTAGATTTTGAGATGGATTGGCTGAGgaagaagaagaagaagaagCCAAAATC 61
||||||||||||||||||||||| |||||| | || |||||||||||||||||||||
Sbjct 76 TTAATTCTTAGATTTTGAGATGGGTTGGCT---G-AG--GAAGAAGAAGAAGCCAAAATC 129
Query 62 CGATGTAGTGTCCGATATAGTGTCTGAGAGAGGAGCCAAGTTGTTA-ACAGATCTGATCG 120
|||| ||| ||||| | ||||| || |||||||||||| | ||| || ||||
Sbjct 130 CGATATAGCGTCCG----A------GAGAG-GG-GCCAAGTTGTTAGA-AGAGCTCATCG 176
Query 121 AAT-TCGGCCATGGCATATCCAATCCCATCAAATTCTTCTCTGCTGATGAGATCCTCAAA 179
||| | || |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 177 AATGT-TGCGATGGCAAATCCAATCCCATCAAATTCTTCTCTGCTGATGAGATCCTCAAA 235
Query 180 GCCACCAACAATTTCAGCGACAT-TAATCGTGTTTCT-CGATTAGCTTATTAC-TCCGAT 236
||||||||| ||||||||||| | |||| ||||| | ||||||| || | | | |
Sbjct 236 GCCACCAACGATTTCAGCGAC-TCTAATTTTGTTT-TACGATTAGAAG-TTCCCTTCAAA 292
Query 237 TGGTATTCAGGTAAGAACGAGAACCATCCCATGATACTCATCAAGAAAGGTGCTAACTTT 296
|||||||| |||||||||||||| |||||||||||||| |||||||||| || | ||
Sbjct 293 TGGTATTCTGGTAAGAACGAGAATCATCCCATGATACTAATCAAGAAAGATGTTGGCTGG 352
Query 297 TGGAG---CTCGAGAGTAGATCTTTTGTGCCGGGACATAGCAGTTTCATCGATGGTGAGT 353
||||| || ||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 353 TGGAGTGGCTTGAGAGTAGATCGTTTGTGCCGCGACATAGCAGTTTCATCGATGGTGAGT 412
Query 354 GGTCACAAAAACTTTTTGAAATTGGTTGGATGTTGTCTTGAGTCT-GAAGAGCCAGTCAT 412
|||||||||||||| |||| |||||||||||||||||||||| | || | ||||||||
Sbjct 413 GGTCACAAAAACTTCATGAAGTTGGTTGGATGTTGTCTTGAGT-TAGATTATCCAGTCAT 471
Query 413 GGTTTATAACGGTGTTAAGAAACACTATCGA-TTAGATATA-GATGAGCAGCCGTGGAAA 470
||| ||| | ||||||||||||| || | | ||||| ||| | ||| ||||| ||||||
Sbjct 472 GGTGTATCATAGTGTTAAGAAACATTA-CAAATTAGAAATAAG-TGAACAGCCATGGAAA 529
Query 471 AGGAGAATGAAGATAGCAGAAGATATCGCTACTGCTTTTGCTTACCTTCACACTGCCTTC 530
| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 530 AAGAGAATGAAGATAGCAGAAGATATCGCTACTGCTTTAGCTTACCTTCACACCGCCTTC 589
Query 531 CCAAGGCCCTTCGTATATAGGATTTTGTATCCTTGGAATATCTTATTGGATGAAGATGGG 590
|| |||||||| |||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 590 CCTAGGCCCTTTGTATATAGGATTTTGTCTCATTGGAATATCTTATTGGATGAAGATGGT 649
Query 591 GTCGCGAAGCTGACTGATTTCTCTCTCTGCGTCTCAATCCCAGAAGGAGAAACATTTGTT 650
||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 650 GTCGCCAAGCTGACTGATTTCTCTCACTGCGTCTCAATCCCAGAAGGAGAAACATTTGTC 709
Query 651 AAGGTTGACAAAGTC-TAC-AGTTACT-T-GT-A-TTT--T--TA-TGACGATAGCAGTG 699
|||||||| || | | | ||| | | || | ||| | || | ||| ||| ||||
Sbjct 710 CGGGTTGACAGAGACGTGGGA-TTA-TATAGTTACTTTGCTGATAATTACGTTAGGAGTG 767
Query 700 GCGTAGTATCAGAGAAAACAGATGTCTTTGCCTTTGGAATGTTTATGGGTC-TAACGCTT 758
|| |||| ||||| |||||||||||||||||||||||||| |||||||||| || ||||
Sbjct 768 GCCTAGTCTCAGATAAAACAGATGTCTTTGCCTTTGGAATCTTTATGGGTCATAG-GCTT 826
Query 759 CTATTAGGA 767
|||||||||
Sbjct 827 CTATTAGGA 835
> AT1G67470.1 | Symbols: | Protein kinase superfamily protein
| chr1:25272182-25273576 FORWARD LENGTH=1395
Length=1395
Score = 726 bits (393), Expect = 0.0
Identities = 852/1060 (80%), Gaps = 86/1060 (8%)
Strand=Plus/Plus
Query 72 TCCGATATAG-TGTCTGAGAGAGGAGCCAAGTTGTTAACAGATCTGATCGAATTCGGCCA 130
||||| |||| | || || |||||||| ||| |||||| |||||||||||||| | || |
Sbjct 99 TCCGAGATAGCT-TCCGAAAGAGGAGCGAAGCTGTTAAAAGATCTGATCGAATGCTGCGA 157
Query 131 TGGCATATCCAATCCCATCAAATTCTTCTCTGCTGATGAGATCCTCAAAGCCACCAACAA 190
||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 158 TGGCAAATCCAATCCCATCAAATTCTTTTCTGCTGATGAGATCCGCAAAGCCACCAACAA 217
Query 191 TTTCAGCGACAT-TAATCGTGTTTCTCG-ATTAGCT--T-A--TT-ACTCCGATTGGTAT 242
|||| ||| | ||||| |||||| || |||| || | | || ||| | | ||||||
Sbjct 218 TTTCGGCG-TGTCTAATCTTGTTTC-CGAATTATCTCATGATTTTGACTACAAATGGTAT 275
Query 243 TCAGGTAAGAACGAGAACCATCCCATGATACTCATCAAGAAAG-GTGCTAACTTTTGGAG 301
||||| ||||||||||||||| ||||||||| ||| ||||| | | | | |
Sbjct 276 TCAGGCAAGAACGAGAACCATGACATGATACTTGTCAGGAAAGCTTTTTCCCAGTCCG-T 334
Query 302 CT-CGAGAGTAGAT-C-TTTTGTGCCGGGACATAGCAGTTTCATCGATGGTGAGTGGTCA 358
|| | | | |||| | |||| | ||| ||||||||||||||||| ||||||||||||||
Sbjct 335 CTACTACA-AAGATACATTTT-T-CCGCGACATAGCAGTTTCATCAATGGTGAGTGGTCA 391
Query 359 CAAAAACTTTTTGAAATTGGTTGGATGTTGTCTTGAGTCTGAAGAGCCAGTCATGGTTTA 418
||||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||
Sbjct 392 CAAAAACTTCCTGAAATTGATTGGATATTGTCTTGAGTTTGAAGAGCCAGTCATGGTTTA 451
Query 419 TAACGGTGTTAAGAAACACTATCGA-TTAG-AT-ATAGATGAGCAGCCGTGGAAAAGGAG 475
| | ||||| |||||||| |||| | |||| || | || ||| |||||||||||||||||
Sbjct 452 TCATGGTGTCAAGAAACATTATC-ATTTAGAATCA-AG-TGAACAGCCGTGGAAAAGGAG 508
Query 476 AATGAAGATAGCAGAAGATATCGCTACTGCTTTTGCTTACCTTCACACTGCCTTCCCAAG 535
||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 509 AATGAAGATAGCAGAGGATATCGCTACTGCTTTAGCTTACCTTCACACCGCCTTCCCAAG 568
Query 536 GCCCTTCGTATATAGGAT-TTTGTATCCTTG-GAATATCTTATTGGATGAAGATGGGGTC 593
|||||||||||||||| | ||||| || || |||||| ||||||||||||||||| |||
Sbjct 569 GCCCTTCGTATATAGG-TGTTTGTCTC-TTACGAATATATTATTGGATGAAGATGGTGTC 626
Query 594 GCGAAGCTGACTG-ATTTCTCTCTCTGCGTCTCAATCCCAGAAGGAGAAACATTTGTTAA 652
|||||||||| || |||||||| ||||||||||||| |||||||||||||||||||| |
Sbjct 627 GCGAAGCTGA-TGGATTTCTCTTTCTGCGTCTCAATACCAGAAGGAGAAACATTTGTCCA 685
Query 653 GGTTGAC-A-A-AGTCT--A-CAGTT-A---CTTGTATTTTTATGAC--GATAGCAGTGG 700
||||||| | | || | | ||||| | |||| | | || || || |||| |||
Sbjct 686 GGTTGACTATATAG-CGGGAACAGTTGATTACTTGAAGCCTAATTACTTGA-AGCA-TGG 742
Query 701 CGTAGTATCAGAGAAAACAGATGTCTTTGCCTTTGGA-ATGTTTATGGGTCTAACGCTTC 759
||||| |||||| |||| |||||||||||| ||||| || | ||| | || |||||
Sbjct 743 TGTAGTCTCAGAGGAAACGGATGTCTTTGCCGTTGGACAT-TCCATG---CAAATGCTTC 798
Query 760 TATTAGGA-AAACAAAGATT-G-TCGGAGCTT-TGTGATGGATC-TTTGC-AG-TCAAAA 812
|| | || ||| ||| ||| | | ||| || || || | | | ||| | | ||||||
Sbjct 799 TAATGGGGGAAA-AAATATTTGATAGGA--TTATGAGAAG-ACCATTTCCTACATCAAAA 854
Query 813 TTAAAGGAAGA-CCGTCGAATCGAAGAGATTGCAGATCCAAAGATGCTAGAAAAGATGGG 871
|| | |||||| || ||| || ||||||||||||||| || | | ||||
Sbjct 855 TTTATGGAAGAGCCAAA-AATGGATGAGATTGCAGATCCA--GA----A-A-----TGGG 901
Query 872 TAATAATATTTCAGAACAAGAGCTTTGTCAAATGGAAGCTTTCCGAATGCTCTCACTGAG 931
| ||| || ||||| ||||||||||||||||| ||||||||| | |||||||||||||
Sbjct 902 CGA-AAT-TT-CAGAAGAAGAGCTTTGTCAAATGAAAGCTTTCCTATTGCTCTCACTGAG 958
Query 932 ATGCATCGGTCCTA--GGGAAGAAGTTCCAACGATGGTGGAAGTTGCCAAAGAACTAAAG 989
||||| ||||| | ||| ||||||||||| ||||||||||| || ||||||||||||
Sbjct 959 ATGCACCGGTCATGTTGGG--GAAGTTCCAACTATGGTGGAAGTGGCTAAAGAACTAAAG 1016
Query 990 AAG-ATTCAAAGATCTCTTTATAACGACTCTTCTTCTCCTTCTGGAGAAACCCATTTCGA 1048
| | |||||||||| |||| | || ||| ||| ||||||||| | |||||||| |||||
Sbjct 1017 A-GTATTCAAAGATGTCTTCACAATGACACTTTTTCTCCTTCAGTTGAAACCCAATTCGA 1075
Query 1049 CTCTCCCCAAGACATTTCTTCCTCAGTCGTCCTCTCAAAC 1088
||||| ||||||||||||||||| || |||||||||||
Sbjct 1076 CTCTCATCAAGACATTTCTTCCTCGGTAATCCTCTCAAAC 1115
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55220599500
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5