BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925457 Length=243 Score E Sequences producing significant alignments: (Bits) Value ATCG00640.1 | Symbols: RPL33 | ribosomal protein L33 | chrC:674... 361 2e-99 > ATCG00640.1 | Symbols: RPL33 | ribosomal protein L33 | chrC:67488-67688 FORWARD LENGTH=201 Length=201 Score = 361 bits (195), Expect = 2e-99 Identities = 199/201 (99%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 23 ATGGCCAAGGGTAAAGATGTTCGAGTAACAATTATTTTGGAATGTACCAGTTGTGTTCGA 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCCAAGGGTAAAGATGTTCGAGTAACAATTATTTTGGAATGTACCAGTTGTGTTCGA 60 Query 83 AATGATATTAAGAAAGAATCCGCGGGAATTTCCAGATATATTACTCAAAAGAATCGGCAT 142 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AATGATATTAAGAAAGAAGCCGCGGGAATTTCCAGATATATTACTCAAAAGAATCGGCAT 120 Query 143 AACACCCCTAGTCGATTGGAATTGAGAAAATTCTGTCCCTATTGTTATAAACATACAATT 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AACACCCCTAGTCGATTGGAATTGAGAAAATTCTGTCCCTATTGTTATAAACATACAATT 180 Query 203 CACTGGGAAATCAAGAAATAG 223 ||| ||||||||||||||||| Sbjct 181 CACGGGGAAATCAAGAAATAG 201 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11008637031 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5