BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925518 Length=308 Score E Sequences producing significant alignments: (Bits) Value AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)... 122 1e-27 > AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr1:4348498-4350867 FORWARD LENGTH=1812 Length=1812 Score = 122 bits (66), Expect = 1e-27 Identities = 88/99 (89%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 6 AGTAGCGGACATGTGATGAGGGAGCCATCTATGATTGTGAGGGAGGTTGCGGCGGAGCAG 65 |||||||||| |||||| | |||||||||||| ||||||| || | |||||||||||| Sbjct 429 AGTAGCGGACGCGTGATGCGTGAGCCATCTATGCTTGTGAGAGAAGCCGCGGCGGAGCAG 488 Query 66 CTCGAGGAGAGGCAGAGCGATTGGGCTTATTTTAAGCCT 104 ||||||||||||||||||||||||||||||| |||||| Sbjct 489 CTCGAGGAGAGGCAGAGCGATTGGGCTTATTCGAAGCCT 527 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14276040716 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5