BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg925524

Length=269
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G20020.1 | Symbols: ATPRMT6, PRMT6 | protein arginine methyl...   150    5e-36


> AT3G20020.1 | Symbols: ATPRMT6, PRMT6 | protein arginine methyltransferase 
6 | chr3:6983705-6988099 REVERSE LENGTH=1812
Length=1812

 Score =  150 bits (81),  Expect = 5e-36
 Identities = 105/117 (90%), Gaps = 0/117 (0%)
 Strand=Plus/Plus

Query  46   GAGCTTGAACTAAAATACAAGAAAGTCCCCGGTCTCAGCTCTTTTGGCAGAGCCAAGGGG  105
            ||||||||| |  || ||||| ||| |||| ||||||||||||||||| ||||||||  |
Sbjct  206  GAGCTTGAATTGGAAGACAAGCAAGGCCCCAGTCTCAGCTCTTTTGGCCGAGCCAAGAAG  265

Query  106  CGCAGTCACGCCGGAGCTCATGACCCTAGAGGCGGTCTCGCCAATGTGCTTAGGGTT  162
            ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct  266  CGCAGTCACGCCGGAGCTCGTGACCCTCGAGGCGGTCTCGCCAATGTGCTTAGGGTT  322



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12315598505


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5