BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg925538

Length=281
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  ATCG00400.1 | Symbols: TRNL.1 | tRNA-Leu | chrC:46894-47490 FOR...  69.4    2e-11


> ATCG00400.1 | Symbols: TRNL.1 | tRNA-Leu | chrC:46894-47490 FORWARD 
LENGTH=85
Length=85

 Score = 69.4 bits (37),  Expect = 2e-11
 Identities = 37/37 (100%), Gaps = 0/37 (0%)
 Strand=Plus/Minus

Query  68   TTAAGTCCGTAGCGTCTACCAATTCCGCCATATCCCC  104
            |||||||||||||||||||||||||||||||||||||
Sbjct  37   TTAAGTCCGTAGCGTCTACCAATTCCGCCATATCCCC  1



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12918811493


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5