BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg925651
Length=1912
Score E
Sequences producing significant alignments: (Bits) Value
AT1G65610.1 | Symbols: ATGH9A2, KOR2 | Six-hairpin glycosidases... 2911 0.0
> AT1G65610.1 | Symbols: ATGH9A2, KOR2 | Six-hairpin glycosidases
superfamily protein | chr1:24391679-24395360 REVERSE LENGTH=2115
Length=2115
Score = 2911 bits (1576), Expect = 0.0
Identities = 1804/1916 (94%), Gaps = 8/1916 (0%)
Strand=Plus/Plus
Query 1 ATCATCCAAGCTCTTTAGCAATGCATCCCGGGAATGTATGGGGCGGGTCTCTGGACGCCG 60
|||||||||||||||| | |||||||||||||||||||||||| ||||| || |||||||
Sbjct 80 ATCATCCAAGCTCTTTCGAAATGCATCCCGGGAATGTATGGGGTGGGTCGCTAGACGCCG 139
Query 61 TAGACAGCGACCGTATCGCGGCAGAGGAGGAAGAACGGCTGAGGAAGACGACGGAGTGGG 120
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 140 TAGACAGCGACCGTATTGCGGCAGAGGAGGAAGAACGGCTGAGGAACACGACGGAGTGGG 199
Query 121 ACAGAGGAGCTATTCATTCACAGAGAAGTGAATTAGACGAAACACAACAAGGCTGGTTGC 180
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 200 ACAGAGGAGCTATTCACTCACAGAGAAGTGAATTAGACGAAACGCAACAAGGCTGGTTGC 259
Query 181 TTGCACCGCAAGATAGTTGGAGGAAGAAGAAGAAGAAATATGTAAACCTAGGTTGTGTTT 240
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 260 TTGCACCGCAAGATAATTGGAGAAAGAAGAAGAAGAAATATGTAAACCTAGGTTGTGTTT 319
Query 241 CCGTGAGCCAG-ACGGCTTGCATGTGGACCGTTGGAACTATTGCCGTTTTGTTTCTCGTC 299
||||||||| | |||| || | |||||||||||||| |||||||||| ||||||||||||
Sbjct 320 CCGTGAGCC-GCACGGTTTTCTTGTGGACCGTTGGATCTATTGCCGTCTTGTTTCTCGTC 378
Query 300 GTTGCTCTTCCGATCATTATTGTTAAGTCGTTGCCTCGTCATAAGTCTACTCCTCCTCCT 359
|||||||||||||||||||| || |||||||||||||||||||||||| | ||||||||
Sbjct 379 GTTGCTCTTCCGATCATTATCGTCAAGTCGTTGCCTCGTCATAAGTCTGCACCTCCTCCG 438
Query 360 CCTGATAATTACACTCTTGCCCTTCACAAAGCTCTTCAGTTTTTCGATGCCCAAAAATCG 419
|||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||
Sbjct 439 CCTGATAATTACACTCTTGCCCTTCACAAAGCACTTCAATTTTTCGATGCTCAAAAATCT 498
Query 420 GGTAAACTGCCGAAGAAGAATAAGGTTTCATGGAGGGGAGATTC-GGGGCTGGGGGATGG 478
||||| ||||||||||||||||||||||||||||| || ||||| ||| | | ||||||
Sbjct 499 GGTAAGCTGCCGAAGAAGAATAAGGTTTCATGGAGAGGTGATTCAGGGAC-GAAGGATGG 557
Query 479 GAAACCGGACGTGGTTGGAGGATTGGTCGGAGGATACTACGACGGAGGAAGTAACATCAA 538
| ||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||
Sbjct 558 GCTGCCGGACGTGGTAGGAGGATTGGTCGGGGGATACTACGACGGAGGAAGCAACGTCAA 617
Query 539 GTTTCATTTTCCGATGGCATTCTCAATGACAATGCTAAGTTGGAGTCTCATTGAGTATAG 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 618 GTTTCATTTTCCGATGGCATTCTCAATGACAATGCTAAGTTGGAGTCTCATTGAGTATAG 677
Query 599 CCACAAATATAAAGCCATCGATGAGTATGATCACATGAGAGATGTTCTCAAATGGGGCAC 658
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 678 CCACAAATACAAAGCCATCGATGAGTATGATCACATGAGAGATGTTCTCAAATGGGGCAC 737
Query 659 TGATTATCTTCTTCTCACTTTCAACAATTCTGCTACTCGCCTTGATCATATTTACACTCA 718
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 738 TGATTATCTTCTTCTCACTTTCAACAATTCTGCTACTCGCCTTGATCATATCTACACTCA 797
Query 719 GGTTGGTGGAGGACTAAGAGATTCAGAATCACCAGATGATATCTACTGTTGGCAAAAACC 778
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 798 GGTTGGTGGGGGACTAAGAGACTCAGAATCACCAGATGATATCTACTGTTGGCAAAAACC 857
Query 779 AGAAGACATGTCCTACGACCGTCCAGTCCTCTCCGCCACTTCCGCGGCCGACCTGGGCGC 838
|||||||||||||||||||||||| |||||||| ||||||| || || ||||| |||||
Sbjct 858 AGAAGACATGTCCTACGACCGTCCCGTCCTCTCTTCCACTTCGGCCGCTGACCTTGGCGC 917
Query 839 AGAAGTTGCTGCAGCCTTATCCGCAGCCTCAATTGTGTTCACTGACAAACCGGACTACGC 898
||||||| ||||||||||| | || || ||||| || |||||||||||||||||||||||
Sbjct 918 AGAAGTTTCTGCAGCCTTAGCTGCTGCTTCAATCGTATTCACTGACAAACCGGACTACGC 977
Query 899 CaaaaaactcaaaaaaGGTGCAGAAACTCTATATCCCTTCTTTAGAAGCAAGTCTAGACG 958
|||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||
Sbjct 978 CAAAAAGCTCAAAAAAGGCGCAGAAACTCTATATCCCTTCTTCAGAAGCAAGTCCAGACG 1037
Query 959 CAAGCGGTATTCGGATGGACAACCAACGGCTCAAGCTTTCTACAACTCAACCAGTATGTT 1018
|||||| || ||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1038 CAAGCGCTACTCGGACGGACAACCAACGGCTCAAGCTTTCTACAATTCAACAAGTATGTT 1097
Query 1019 CGATGAGTTCATGTGGGCTGGTGCATGGCTTTACTACGCCACTGGAAACAAGACTTATAT 1078
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1098 CGACGAGTTCATGTGGGCTGGTGCATGGCTTTACTACGCCACTGGAAACAAGACTTACAT 1157
Query 1079 ACAATAT-GCCACCACGCCGAGTGTACCTCAAACGGCTAAAGCTTTTGCTAATCGACCAG 1137
||||| | |||||||| ||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1158 ACAAT-TCGCCACCACACCGAGTGTACCTCAAACTGCTAAAGCTTTTGCTAATCGACCCG 1216
Query 1138 ATTTAATGGTACCAAGCTGGAATAACAAATTACCTGGAGCAATGTTGTTGATGACTCGGT 1197
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1217 AGTTAATGGTACCGAGCTGGAATAACAAATTACCTGGAGCAATGTTGTTGATGACTCGGT 1276
Query 1198 ATAGATTGTTCTTGAACCCTGGTTTTCCTTACGAGAACATGCTCAATAGATACCATAACG 1257
||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||
Sbjct 1277 ATAGATTGTTCTTGAACCCTGGTTTCCCTTACGAAAACATGCTCAATAGGTACCATAACG 1336
Query 1258 CTACTGGTATCACCATGTGTGCTTATCTCAAGCAGTACAATGTCTTTAACCGGACTTCAG 1317
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1337 CTACTGGTATCACCATGTGTGCTTATCTCAAGCAGTACAATGTCTTTAACCGAACTTCAG 1396
Query 1318 GAGGGCTTATGCAACTCAACATGGGGAAACCAAGACCACTAGAATATGTTGCTCATGCTT 1377
|||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct 1397 GAGGGCTTATGCAACTCAACTTGGGGAAACCAAGACCACTTGAATATGTGGCTCATGCTT 1456
Query 1378 CCTTCTTAGCTTCCTTGTTCGCGGATTATCTTAATTCTACTGGAGTTCCTGGATGGTATT 1437
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1457 CCTTCTTAGCTTCCTTGTTCGCGGATTATCTTAATTCTACTGGAGTTCCTGGATGGTACT 1516
Query 1438 GTGGACCTACATTTGTGGAGAACCATGTTCTCAAGGATTTTGCTCAGTCTCAGATTGACT 1497
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1517 GTGGACCTACATTTGTAGAGAACCATGTTCTCAAGGATTTTGCTCAGTCTCAGATTGATT 1576
Query 1498 ACATTCTTGGAGACAACCCTTTAAAAATGAGCTATGTGGTTGGGTTTGGCAAGAAGTATC 1557
||||||||||||||||||| ||||||||||||||||||||||| || |||||||||| ||
Sbjct 1577 ACATTCTTGGAGACAACCCCTTAAAAATGAGCTATGTGGTTGGATTCGGCAAGAAGTTTC 1636
Query 1558 CTAGACGTGTTCACCACCGAGGAGCCACGATCCCAAACGACAAGAAGAGAAGAAGCTGTA 1617
| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct 1637 CAAGACGTGTTCATCACCGAGGCGCCACGATCCCAAACGACAAAAAGAGGAGAAGCTGTA 1696
Query 1618 GAGAAGGATTGAAGTATAGAGACACAAAGAATCCAAATCCAAACAACATCACAGGAGCTA 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697 GAGAAGGATTGAAGTATAGAGACACAAAGAATCCAAATCCAAACAACATCACAGGAGCTA 1756
Query 1678 TGGTCGGTGGACCAAATAGATTCGATGAGTTCCATGACTTGCGAAACAATTATAACGCGA 1737
|||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
Sbjct 1757 TGGTTGGTGGACCAAACAAATTCGATGAGTTCCATGACTTGCGAAACAATTATAACGCAA 1816
Query 1738 GCGAGCCTACTCTCTCTGGTAACGCAGGCCTTGTGGCTGCTCTCATTTCACT-AACCAGC 1796
||||||||||||||||||||||||||||||| || ||||||||| |||| || |||||||
Sbjct 1817 GCGAGCCTACTCTCTCTGGTAACGCAGGCCTCGTAGCTGCTCTCGTTTC-CTTAACCAGC 1875
Query 1797 AGTGGTCGCCAACTAATCGATAAGAACACGATGTTCAATAGTGTTCCTCCTCTCTACCCT 1856
|||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1876 AGTGGTGGCCAACAAATTGATAAGAACACGATGTTCAATAGTGTTCCTCCTCTCTACTCT 1935
Query 1857 CCGACTCCACCACCTCCTAAAGCCTGGAAGCCTTGAAATATATTTCATCTACGTCA 1912
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1936 CCGACTCCACCACCTCCTAAAGCCTGGAAGCCTTGAAAAATATTGCATCTACGTCA 1991
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94678227870
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5