BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg925690

Length=299
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G66540.1 | Symbols:  | Cytochrome P450 superfamily protein |...   381    2e-105
  AT4G37360.1 | Symbols: CYP81D2 | cytochrome P450, family 81, su...   270    4e-72 
  AT4G37340.1 | Symbols: CYP81D3 | cytochrome P450, family 81, su...   237    4e-62 


> AT1G66540.1 | Symbols:  | Cytochrome P450 superfamily protein 
| chr1:24824459-24826586 FORWARD LENGTH=1623
Length=1623

 Score =  381 bits (206),  Expect = 2e-105
 Identities = 231/243 (95%), Gaps = 1/243 (0%)
 Strand=Plus/Plus

Query  55    CGTTCGGGTTAGGAAGAAGAGCTTGTCCTGGGTCCGGACTGGCTCAACGGCTAGTGAGCT  114
             |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct  1316  CGTTCGGGTTAGGAAGAAGAGCGTGTCCTGGTTCCGGACTGGCTCGACGGCTAGTGAGCT  1375

Query  115   TGAGTCTCGGGTCTTTGATTCAATGCTTTGAATGGGAGAGGATTGGAGAAGAAGAGGTGG  174
             ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct  1376  TGAGTCTCGGGTCTTTGATTCAATGTTTTGAATGGGAGAGGATTGGAGAAGAGGAGGTGG  1435

Query  175   ATATGACTGAAGGTGGAGGACTCACAATGCCTAGAGCTAGACCTTTGGTAGCCATGTGCC  234
             |||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||| 
Sbjct  1436  ATATGACTGAAGGTGGTGGACTCACAATGCCTAGAGCTATTCCGTTGGTAGCCATGTGCA  1495

Query  235   GAGCACGTGCCTTTGTTGGAAAAATTCTACATGAGTCTGGTTGATTTTGTA-ACTTTTGT  293
             ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct  1496  GAGCACGTGCCTTTGTTGGAAAAATTCCACATGAGTCTGGTTGATTTTGTATACTTTTGT  1555

Query  294   AAA  296
             |||
Sbjct  1556  AAA  1558


> AT4G37360.1 | Symbols: CYP81D2 | cytochrome P450, family 81, 
subfamily D, polypeptide 2 | chr4:17567124-17568858 REVERSE 
LENGTH=1500
Length=1500

 Score =  270 bits (146),  Expect = 4e-72
 Identities = 193/216 (89%), Gaps = 2/216 (1%)
 Strand=Plus/Plus

Query  45    AAGCTACTAG-CGTTCGGGTTAGGAAGAAGAGCTTGTCCTGGGTCCGGACTGGCTCAACG  103
             |||||| | | |||||||| |||||||||| || |||||||| |||||  ||||||| ||
Sbjct  1267  AAGCTAAT-GCCGTTCGGGCTAGGAAGAAGGGCATGTCCTGGATCCGGTTTGGCTCAGCG  1325

Query  104   GCTAGTGAGCTTGAGTCTCGGGTCTTTGATTCAATGCTTTGAATGGGAGAGGATTGGAGA  163
             |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct  1326  GCTAGTGACCTTGAGTCTCGGGTCTTTGATTCAATGTTTTGAATGGGAGAGGATTGGAGA  1385

Query  164   AGAAGAGGTGGATATGACTGAAGGTGGAGGACTCACAATGCCTAGAGCTAGACCTTTGGT  223
             ||||||||| |||||||||||||||  ||||||||||||||| | ||||||||| |||| 
Sbjct  1386  AGAAGAGGTCGATATGACTGAAGGTCCAGGACTCACAATGCCGAAAGCTAGACCGTTGGA  1445

Query  224   AGCCATGTGCCGAGCACGTGCCTTTGTTGGAAAAAT  259
             ||| |||||| ||||||||| ||||||||| |||||
Sbjct  1446  AGCTATGTGCAGAGCACGTGACTTTGTTGGTAAAAT  1481


> AT4G37340.1 | Symbols: CYP81D3 | cytochrome P450, family 81, 
subfamily D, polypeptide 3 | chr4:17564850-17566787 REVERSE 
LENGTH=1687
Length=1687

 Score =  237 bits (128),  Expect = 4e-62
 Identities = 214/255 (84%), Gaps = 8/255 (3%)
 Strand=Plus/Plus

Query  45    AAGCTACTAGCGTTCGGGTTAGGAAGAAGAGCTTGTCCTGGGTCCGGACTGGCTCAACGG  104
             |||||| | | ||| ||| |||||||||| || |||||||||||||| ||||||||||||
Sbjct  1348  AAGCTATTGGGGTTTGGGCTAGGAAGAAGGGCGTGTCCTGGGTCCGGTCTGGCTCAACGG  1407

Query  105   CTAGTGAGCTTGAGTCTCGGGTCTTTGATTCAATGCTTTGAATGGGAGAGGATTGGAGAA  164
             |||| |||||||| | ||||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct  1408  CTAGCGAGCTTGACTATCGGGTCTTTGATTCAATGTTTTGAGTGGGAGAGGATAGGAGAA  1467

Query  165   GAAGAGGTGGATATGACTGAAGGTGGAGGAC---TCACAATGCCTAGAGCTAGACCTTTG  221
             ||||||||||||||||||||||||||||||    ||| |||||| | ||||| ||| |||
Sbjct  1468  GAAGAGGTGGATATGACTGAAGGTGGAGGAGGAGTCATAATGCCCAAAGCTATACCGTTG  1527

Query  222   GTAGCCATGTGCCGAGCACGTGCCTTTGTTGGAAAAATTCTACAT-GAGTCTGGTTGATT  280
             ||||||||||||  ||||||  || ||||||| || || || ||  ||||| | ||||  
Sbjct  1528  GTAGCCATGTGCAAAGCACGCCCCGTTGTTGGTAAGATCCT-CAACGAGTCCGCTTGAGC  1586

Query  281   TT-GTAACTTTTGTA  294
             || | | ||||||||
Sbjct  1587  TTAG-A-CTTTTGTA  1599



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 13823630975


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5