BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg925736
Length=1231
Score E
Sequences producing significant alignments: (Bits) Value
AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol ... 900 0.0
AT4G33290.1 | Symbols: | F-box and associated interaction doma... 263 3e-69
AT4G10740.1 | Symbols: | F-box and associated interaction doma... 202 7e-51
AT5G41510.1 | Symbols: | F-box and associated interaction doma... 200 3e-50
AT3G23685.1 | Symbols: | F-box associated ubiquitination effec... 165 9e-40
AT5G41500.1 | Symbols: | F-box and associated interaction doma... 148 9e-35
AT3G22870.1 | Symbols: | F-box and associated interaction doma... 147 3e-34
AT3G23680.1 | Symbols: | F-box associated ubiquitination effec... 100 3e-20
AT3G22421.1 | Symbols: | F-box and associated interaction doma... 86.1 7e-16
AT4G09790.1 | Symbols: | pseudogene of the F-box family protei... 56.5 6e-07
> AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein | chr1:24571603-24573471
REVERSE LENGTH=1662
Length=1662
Score = 900 bits (487), Expect = 0.0
Identities = 998/1232 (81%), Gaps = 85/1232 (7%)
Strand=Plus/Plus
Query 30 ACGATGTCAAATCTTCCAACGGATTTAG-TAGAGGAGATTATCTCTAAG-GTTCCTTTGA 87
|||||||||||||||||||||||||| | ||||||| ||||||||| || |||||| ||
Sbjct 472 ACGATGTCAAATCTTCCAACGGATTT-GTTAGAGGAAATTATCTCT-AGAGTTCCTCGGA 529
Query 88 AATCTATGAGAGGAGTGCGATTAACTTGCAAAAAGTGGAACGATTTGTTCAAAAGCCGGA 147
||| |||||||| |||||||||||||||||||| |||||||| | |||||||||||| ||
Sbjct 530 AATATATGAGAGCAGTGCGATTAACTTGCAAAAGGTGGAACGGTATGTTCAAAAGCCAGA 589
Query 148 GCTTTACGAAGATGCACATTGGCAAACAAGAA-CAAGCAGCTAGGGAA-TTAGGTCAAAC 205
|||||||||||||||||||||||||| ||||| | |||| | |||||| | ||| || ||
Sbjct 590 GCTTTACGAAGATGCACATTGGCAAAGAAGAAGC-AGCAACAAGGGAACTAAGG-CAGAC 647
Query 206 TCGGATGATCA-TGATGATGGATTACAATGTTTATTTAATGGGCATTGTC-CTCAATGAA 263
||||||||| | |||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 648 TCGGATGAT-AGTGATGATGGATTACAATGTTTATTTAATGGGCATTG-CAGTCAATGAA 705
Query 264 AATCCATCCACAGAGTCTCTAGATAAACTTACGTGCCTACAAGATTCAGAACAAGTCAAA 323
| |||||||| |||| |||||| ||||||||| |||||| | ||||||||||| |||||
Sbjct 706 ATTCCATCCATAGAGACTCTAGGTAAACTTACTTGCCTAGACGATTCAGAACAGGTCAAG 765
Query 324 ATTTATCAAGTCTTTCATTGTGAGGGTTTATTGTTATGCATCTTGAAAGATGATGATACT 383
|| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 766 ATATCTCAAGTCTTTTGTTGTGAGGGTTTATTGTTATGCATCTTGAAAGATGATGATACT 825
Query 384 AAGGTTGTTGTTTGGAATCCGTATTTGGGGCAAACGAGATGGATCCAAACCAGAAAGTAT 443
||| |||| |||||||||||||||||||||||||| || ||||||||||| ||| | ||
Sbjct 826 AAGATTGTGGTTTGGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAACAAGATTG-AT 884
Query 444 TACCA-CGCTAGTGGAGGGAAAGGACGAGATTTTTACAAGTACGCTCTAGGATACAAAAA 502
| | || ||||||| |||| | | || | || | | ||| |||||| |||
Sbjct 885 TTGCTGCGTTAGTGGATGGAA-G-A--AG-T----AC--G--CTCTC--GGATACGGAAA 929
Query 503 TAATCGC-AAAAGAAAATCTTGTCGTAGCCCTAAAATCTTGAGGTTTATAGATGATTTCA 561
|||| | |||| | | |||||||||||||| |||||||||||| ||| |||| ||||||
Sbjct 930 TAATAGTGAAAACAGA-TCTTGTCGTAGCCCCAAAATCTTGAGGGTTACAGATAATTTCA 988
Query 562 ACCGTTACC-CGAAGAACCCTGCTT-TACGGTATGAAATCTACGATTTTGATTCTGATTT 619
|| || | |||| ||| | | | | | |||||||||||| ||||||||||||||| |
Sbjct 989 ACATTTTCAGCGAA-AACA-TACCTCTCCAGTATGAAATCTATGATTTTGATTCTGATGT 1046
Query 620 ATGGACTACTCTTGATGTCTTTCCACACTGGCGTATATTGTCCCACCATGGCATTTCTCT 679
|||||||||||||||||| | |||||||||| |||| |||| | | |||| |||||||
Sbjct 1047 ATGGACTACTCTTGATGTGTCTCCACACTGGTTTATAATGTCTGAACGTGGCCTTTCTCT 1106
Query 680 CAAGGGAAACACTTACTGGGGCGTTGTAGAACGGAACGCAAA-GGCA-CACATTAAACAT 737
||||||||||||||||||||||| | ||||||| ||||| | || | | |||| | |||
Sbjct 1107 CAAGGGAAACACTTACTGGGGCGCTAAAGAACGGCACGCATACGG-ATC-CATTGATCAT 1164
Query 738 ATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGACCGTTTCTGCCTCTTCCTCTGCCG 797
||||||||||||||||||||||| ||||||||||||||| || ||| ||||||||
Sbjct 1165 ATAATCTGTTTTGATTTTACAAGAGAGAGATTTGGACCG---CT---TCTACCTCTGCCA 1218
Query 798 TTTAGGGATTGGAAG-GCACAATGTGTTTCTCTATCTTCAGTTAGAGACGAGAAGATCGC 856
||||| | |||| | ||||| | || || |||||||| |||||||| || || ||| |
Sbjct 1219 TTTAGTGCTTGGG-GTGCACAGTTTGCGTCACTATCTTCGGTTAGAGAAGATAAAATCAC 1277
Query 857 GGCTTTCTTTCAAGAAAGGG-GAACATATAAAATTGAGATATGGATTACGACTAAGATTG 915
||||| ||||| ||| | || ||||||| ||||| |||||||||||||||||||||
Sbjct 1278 TGCTTTATTTCA-GAATTGCCGAGCATATAAGCTTGAGCTATGGATTACGACTAAGATTG 1336
Query 916 A-GACCGAA-AATGTCT-CTTGGAGCAATTTCTTCACAACGAATATGCCAT-CAT----G 967
| | | || |||| | | |||||||| |||||||||| | ||| |||| | | |
Sbjct 1337 ATGTC--AACAATG-CGACGTGGAGCAAATTCTTCACAATGGATACACCATACCTTCACG 1393
Query 968 TA-TTGGCTAT-AGGCTTAA-GAGTTTCTTCATTGAGGAGGAGAA-ACAAGTTGCTGTTG 1023
| || || | | |||| || |||||||||||| ||||| || | || ||| ||| |
Sbjct 1394 AAATT--CTTTCA---TTAAAGACTTTCTTCATTGACGAGGAAAATAAAA-TTGTTGTGG 1447
Query 1024 TTTTTGACAAAGAA-G-GA-A--AAA----ATCTAT-GC--GATACTATTCATATCATT- 1070
||| | | |||||| | || | ||| | ||| || || | |||| | ||||||
Sbjct 1448 TTTCTAATAAAGAAAGAGACACTAAAGGCGACCTAACGCACGACAGTATTGACATCATTA 1507
Query 1071 --GGAGAGGCTGGATGCTTGAGGAAAGTGGAGCTTGGAGAACCCACAGaaaaaaaGTGTT 1128
||||||||| |||||||| ||||| ||| ||||||| |||| |||| ||||| ||||
Sbjct 1508 ATGGAGAGGCTAGATGCTTGTGGAAATTGGGGCTTGGAAAACCGGCAGACAAAAACTGTT 1567
Query 1129 TGCCACTTGTGTGCTCTTATGTTCCAAGTATAGTGCAAATCAAGCTACATAAAGAAGGCA 1188
||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||||
Sbjct 1568 GGCCACTTGTGTGCCCTTATGTTCCAAGTGTAGTGCAAATCAAGCAACATAAAGGAGGCA 1627
Query 1189 AAAGGAAAGAACAAAGCGATTAGGAAAGACAT 1220
||| ||||||||| |||||||| |||| |||
Sbjct 1628 AAACGAAAGAACAGAGCGATTATAAAAGGCAT 1659
> AT4G33290.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:16049573-16050865 FORWARD LENGTH=1293
Length=1293
Score = 263 bits (142), Expect = 3e-69
Identities = 705/957 (74%), Gaps = 118/957 (12%)
Strand=Plus/Plus
Query 40 ATCTTCCAACGGATTTAG-TAGAGGAGATTATCTCTAA-GG-TTCCTTTGAAATCTATGA 96
||||||||| |||||| | |||| || || | || || || |||| ||| ||||||||
Sbjct 11 ATCTTCCAAAGGATTT-GATAGAAGAAATCCTTTC-AAGGGTTTCC-ATGACATCTATGA 67
Query 97 GAGGAGTGCGATTAACTTGCAAAAAG-TGGAACGA-TTTGTTCAAAAGCCG-GAGCTTTA 153
||| ||||||||||||||| ||||| ||||| | ||| | ||| || | ||||||||
Sbjct 68 GAGTTGTGCGATTAACTTGC-AAAAGTTGGAA-TACTTTATCCAATAG-TGAGAGCTTTA 124
Query 154 CGAAGATGCACATTGGCAAACAAG-AACAAGCAGCTAGGGAATTAGGTCAAACTCGGATG 212
||||||||||||||| | ||| || | || | || | | ||| || || || ||
Sbjct 125 AGAAGATGCACATTGG--TA-AAGTTAC-ATCAACGAGAG-A--AGGAGAATCTAGGGTG 177
Query 213 ATCATGATGATGGATTACAATGTTTATTTAATGGGCATTGTCCTCA---ATGA---AAAT 266
|||||| |||| ||||||||| ||| ||| ||| || |||||||| |||| ||
Sbjct 178 ATCATGTTGATAGATTACAATCTTTTTTTGATGAGCGCTGTCCTCATGGATGACGTTGAT 237
Query 267 CCATCCACAGAGTCTCTAGATAAACTTACG-TGCCTACAAGATTCAGAACAAGTCAAAAT 325
||||| | ||||| | || |||||||| | || || ||| ||||||||||| ||
Sbjct 238 CCATCTATAGAGTTTAAAGGTAAACTTA-GTTGTCT-TAAG-----GAACAAGTCAAGAT 290
Query 326 TTATCAAGTCTTTCATTGTGAGGGTTTATTGTTATGCATCTTGAAAGATGATGATACTAA 385
| |||||||||||| |||||||||||||||||||||||||||||||| ||| | |||
Sbjct 291 ATCTCAAGTCTTTCACTGTGAGGGTTTATTGTTATGCATCTTGAAAGACGAT-A--CTA- 346
Query 386 GG-TTGTTGTTTGGAATCCGTATTTGG--GGCAAACGAGATGGATCCAAACC-AGAAAGT 441
|| |||||||||||||||||||| || || |||| || |||||| | ||| ||| | |
Sbjct 347 GGATTGTTGTTTGGAATCCGTATA-GGCAGG-AAACAAGGTGGATC-ATACCTAGATATT 403
Query 442 ATTACCA-CGCTAGTGGAGGGAAAGGACGAGATTTTTACAAGTACGCTCTAGGATACAAA 500
| ||| | | | | | | || | || | || | | | || ||||| |||||| |
Sbjct 404 CTCACCGTC-C-A-T--ACGTAATGAAC-A-ATATC-AGA--TATGCTCTTGGATACGAG 453
Query 501 AATAATCGCAAAAGAAAATCTTGTCGTAGCCCTAAAATCTTGAGGTTTATAGATGATTTC 560
|||||| ||| ||| ||||||||| |||| | ||||||||||||||| ||| |
Sbjct 454 AATAAT---AAA------TCTGGTCGTAGCCTTAAATTATTGAGGTTTATAGATTATTGC 504
Query 561 AACCGTTACCCGAAGAACC-C-TGCT-TTACGGTATGAAATCTACGATTTTGATTCTGAT 617
|| ||| ||| || | | | | || || ||||||||||||||||||| ||||||
Sbjct 505 TAC----ACC-GAA-AAGCACATT-TGTT--GGCATGAAATCTACGATTTTGACTCTGAT 555
Query 618 TTATGGACTACTCTTGATGTCTTTCCACACTGGCGTATATTGTCCCAC----CATG-G-C 671
|||||||| |||||||||||| |||||| ||| ||||||||| | | || | |
Sbjct 556 TTATGGACAACTCTTGATGTCACTCCACATTGGTATATATTGTCTAATTGGTCTTGTGTC 615
Query 672 -AT----T-TCTCTCAA-GGGAAACACTTACTGGGGCGTT-GTAGAACGGAA-CGCAAA- 721
| | |||||||| ||||| |||||||||| | | | | |||| | || | || |
Sbjct 616 CAAGGCGTCTCTCTCAAAGGGAA-CACTTACTGGTGTGCTAG-AGAA-GAAAACTCAGAT 672
Query 722 GGC-ACACATTAAACATATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGACCGTTTC 780
|| ||| || |||||||||||||||||||||||||| ||||||||||| ||| |||
Sbjct 673 GGTTACA-AT----CATATAATCTGTTTTGATTTTACAAGAGAGAGATTTGGTCCGCTTC 727
Query 781 TGCCTCTTCCTCTGC-CGTT-TAGGGATTGGA-AGGCACAATGTGTTTCTCTATCTTCAG 837
||||||| || | |||| ||| | || | | | | | |||| | || ||||| |
Sbjct 728 TGCCTCTACCGGTTAACGTTATAGATAATGAATATGAATA-TGTGACT-TC-ATCTTGTG 784
Query 838 TTAGAGACGAGAAGATCGCGGCTTTCTTTCAAG-A-AAGGGG--A-A-C-ATATAAAATT 890
||||||| | |||||| |||||||| ||||| | | || | | | | |||| | ||
Sbjct 785 TTAGAGAAGGGAAGATTGCGGCTTTATTTCA-GCACAACGATTCATATCCATATGAGCTT 843
Query 891 GAGATATGGATTACGACTAAGATTGAGACCGAAAATG-TCTCTTGGAGCAATTTCTT 946
||||||||||||||||||||||||||| | |||| || | || |||| ||| |||||
Sbjct 844 GAGATATGGATTACGACTAAGATTGAGGCGGAAA-TGGTGTCGTGGAACAAGTTCTT 899
> AT4G10740.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:6617143-6618426 REVERSE LENGTH=1284
Length=1284
Score = 202 bits (109), Expect = 7e-51
Identities = 206/250 (82%), Gaps = 17/250 (7%)
Strand=Plus/Plus
Query 983 TAAGAGTTTCTTCATTGAGGA-GGAGAA-ACAAGTTGCTGTTGTTTTTGACAAAG---AA 1037
|||||||||||||||||| | |||||| | |||||||| | |||||||| |||| ||
Sbjct 999 TAAGAGTTTCTTCATTGA-CATGGAGAAGA-AAGTTGCTATGGTTTTTGATAAAGAAAAA 1056
Query 1038 GG-AAAAAA-TCTAT-GCGATACTATTCATATCATTGGAGAGGCTGGATGCTTGAGGAAA 1094
|| |||||| || | | | | |||| ||||||||||||||||||||||| ||||||||
Sbjct 1057 GGAAAAAAAGTCGCTCACAACATTATTAATATCATTGGAGAGGCTGGATGCGTGAGGAAA 1116
Query 1095 GTGGAGCTTGGAGAACCCACAGaaaaaaaG-TGTTTGCCACTTGTGTGCTCTTATGTTCC 1153
||| ||| |||| | || | ||||| |||| ||||||||||||||||||||||||
Sbjct 1117 TTGGTTCTTAAAGAATCTGGAG-ACAAAAGCTGTTGGCCACTTGTGTGCTCTTATGTTCC 1175
Query 1154 AAGTATAGTGCAAATCAAGCTACATAA-AGAAGGCAAAAGG-AAAGAACAAAGCGATTAG 1211
||||| |||||||||||||| |||||| ||| ||||||||| ||| || |||| ||||||
Sbjct 1176 AAGTACAGTGCAAATCAAGCAACATAATAGA-GGCAAAAGGCAAA-AA-AAAGTGATTAG 1232
Query 1212 GAAAGACATC 1221
||||| ||||
Sbjct 1233 GAAAGGCATC 1242
> AT5G41510.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16607124-16608326 FORWARD LENGTH=1203
Length=1203
Score = 200 bits (108), Expect = 3e-50
Identities = 563/770 (73%), Gaps = 82/770 (11%)
Strand=Plus/Plus
Query 32 GATGTCAAATCTTCCAACGGATTTAG-TAGAGGAGATTATCTCTAAGGTTCCTTTGAAAT 90
||| || |||||||||| |||||| | ||||||||||| | |||| |||||| |||| ||
Sbjct 12 GATCTCCAATCTTCCAAGGGATTT-GATAGAGGAGATTTTTTCTAGGGTTCCCTTGACAT 70
Query 91 CTATGAGAGGAGTGCGATTAACTTGCAAAAAG-TGGAACGATTTGTTC-AAAAGCCG-GA 147
|||||| || |||| ||||||||||| ||||| |||||| |||| || ||||| | ||
Sbjct 71 CTATGAAAGCAGTGAGATTAACTTGC-AAAAGTTGGAACAATTT-ATCTAAAAG-TGAGA 127
Query 148 GCTTTACGAAGATGCACATTGGCAAACAAGAACAAGCAGCTAGGGAATTAGGTCAA-ACT 206
||||||||||| |||||||||| ||| | |||| | || ||| | | || |||
Sbjct 128 GCTTTACGAAGGTGCACATTGG-----TAGAGC-AGCAACAAGAGAA-GA-G--AAGACT 177
Query 207 CGGATGA-TC-ATGATGATGGATTACAATGTTTATTTAATGGGCATTGTCCTC-A--ATG 261
||| | || ||| ||||| | |||| || |||||||| | |||||| || | | |
Sbjct 178 ATGAT-AGTCGATG-TGATGCCTCACAAACTTAATTTAATGAGTATTGTCATCGACGACG 235
Query 262 AAAATCCATCCACAGAGTCTCTAGATAAACTTACGTGCCTACAAGATTCAGAACAAGT-C 320
| |||||| |||||| | || | | ||| || ||| |||| || || | |
Sbjct 236 TTACTCCATCTGCAGAGTTTAAAGGTCAGTTTA-GT--TTAC----TTCACAAGAACTAC 288
Query 321 AAAATTTATCAAGTCTTTCATTGTGAGGGTTTATTGTTATGCATCT-TGAAAGATGATGA 379
|| |||||||||| || | ||||||||| ||||||||||| | || || | |||
Sbjct 289 CGTATAAATCAAGTCTTACACTATGAGGGTTTGTTGTTATGCAT-TATG-AA-A-GATCC 344
Query 380 TACTAAGG-TTGTTGTTTGGAATCCGTATTTGGGGCAAACGAGATGGATCCAAAC-CAGA 437
|||| ||| |||| |||||||||||||||||||| ||||| || ||||||| ||| |||
Sbjct 345 TACT-AGGATTGTGGTTTGGAATCCGTATTTGGGACAAACAAGGTGGATCC-AACTCAG- 401
Query 438 AAGTATTACCA-CGCTAGTGGAGGGAA-AGGACGAGATTTTTACAAG-TACGCTCTAGGA 494
||||| || || | | |||| | ||| | ||| | || || ||||| |||
Sbjct 402 --GTATTTTCACCG-T-CCACATGGAATA-GAC--CA--TTT-C-AGATATGCTCTCGGA 450
Query 495 TACAAAAATAATCGCAAAAGAAAATCTTGTCGTAGCCCTAAAATCTTGAGGTTTATAGAT 554
||| || | ||| |||||||| |||||| |||| |||| |||||| |||||
Sbjct 451 TAC--------GCGGATAAG-GAATCTTGTAGTAGCCTTAAATTCTTAAGGTTTTTAGAT 501
Query 555 GATTTC-A-ACCGTTACCCGAAGAACCCTGCTTTACGGTATGAAATCTACGATTTTGATT 612
||||| | | | ||||||||| | ||| |||||||||||||||||||||| |
Sbjct 502 TATTTCTACAAAG-CACCCGAAGAGGAAT-TTTTTTGGTATGAAATCTACGATTTTGACT 559
Query 613 CTGATTTATGGACTACTCTTGATGTCTTTCCACACTGGCGTA--TATT-GTCCCACCATG 669
||| ||||||||| |||||| ||||| |||||||||| ||| |||| | | || |
Sbjct 560 CTGGTTTATGGACAACTCTTAATGTCACTCCACACTGGGGTATTTATTCGACTTGCCCTT 619
Query 670 GCATTTCTCTCAAGGGAAACACTTACTGGGGC-GTTGTAGAACGGAACGCA-AAGG-CAC 726
| |||| || |||||||||||||||| || | | | |||| ||| | || |||| |
Sbjct 620 GTGTTTCCCTTAAGGGAAACACTTACT-GGCCTGCTAAAGAAAGGAGCACACAAGGTTTC 678
Query 727 ACATTA-AACATATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGACC 775
|| | | |||||||| |||| ||||||||||| ||||||||||||||
Sbjct 679 -CA--AGATTATATAATCCGTTTCGATTTTACAAGAGAGAGATTTGGACC 725
> AT3G23685.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8527239-8528317 FORWARD LENGTH=993
Length=993
Score = 165 bits (89), Expect = 9e-40
Identities = 444/606 (73%), Gaps = 61/606 (10%)
Strand=Plus/Plus
Query 205 CTCGGATGATCATGATGATGGATTACAATGTTTATTTAATGGGCATTGTCCTCAATGAAA 264
||| ||||||| ||||||||| | ||||| ||| ||||| | | ||| | ||||||| |
Sbjct 38 CTCAGATGATCGTGATGATGGGTAACAATCTTTCTTTAACGAGTATTATTCTCAATGGAG 97
Query 265 ATCCATCCACAGAGTC-TCTA-GATAAACTTACGTGCCTACAAGATTCAGAACAAGTCAA 322
||||||| | |||| | | | || |||||| | ||||| || | |||||||||||
Sbjct 98 ATCCATCTATAGAG-CATAAAGGA-AAACTTCCTTGCCT---TGA--C-GAACAAGTCAA 149
Query 323 AATTTATCAAG-TCTTTCATTGTGAGGGTTTATTGTTATGCATCTTGAAAGATGATGATA 381
|| | || || ||| ||| || ||||| ||| || ||||||| || ||| | ||||||
Sbjct 150 GATATCTC-AGTTCTATCACTGCGAGGGCTTACTGCTATGCAT-TTTAAA-A-GATGATT 205
Query 382 CTAAGG-TTGTTGTTTGGAATCCGTATTTGGGGCAAACGAGATGGATCCAAACCAGAAAG 440
|| ||| |||| ||||| ||||||||||||| |||||| || ||||| | ||||| | |
Sbjct 206 CT-AGGTTTGTGGTTTGTAATCCGTATTTGGAGCAAACAAGGTGGAT-CGAACCA-AGA- 261
Query 441 TATTACCA-CGCTAGTGGAGGGAAAGGACGAGATTTTTACAAGTACGCTCTAGGATACAA 499
|||| ||| || | | ||| ||| || || | | |||||||| ||||||
Sbjct 262 TATTCCCATCG-T-CCACACGGATGGGA-TAG-GTTCT-C--TTACGCTCTTGGATACGT 314
Query 500 AAATAATCGCAAAAGAAAATCTTGTCG-TAGCCCTA-AA-ATCTTGAGGTTTATAGATGA 556
||| | || | | |||||| | || ||| || | ||| |||| |||||| |
Sbjct 315 GAAT-A-CG-----G--ATTCTTGTTGTTA---CTACAAGTTGTTGGGGTTGATAGATTA 362
Query 557 TTTCAACCGT-TACCCGAAGAA-CCCTGCTTTACGGTATGAAATCTACGATTTTGATTCT 614
|| | || | || || |||| | | |||| |||||| ||||||||||||||| |||
Sbjct 363 TTACTACAATGCACACG-AGAAGCAATTCTTT-TGGTATGGAATCTACGATTTTGACTCT 420
Query 615 GATTTATGGACTACTCTTGATGTCTTTCCACACTGGCGTATA---TTGTCCCACCATGGC 671
|||||||||||||||||||||||| ||| || ||||||||| || | ||| ||||
Sbjct 421 GATTTATGGACTACTCTTGATGTCACTCCGCATTGGCGTATAGCGTTTTGTAACCGTGGC 480
Query 672 ATTTCTCTCAAGGGAAACACTTACTGGGGCGTTGTAGAACGGAACGCA-AAGGC-A--CA 727
||||||| ||||||| ||| |||||| | | || |||| |||||| | | | | | |
Sbjct 481 GTTTCTCTTAAGGGAAGCACGTACTGGTGTGCTGCAGAAAGGAACGTAGATGTCGATGAA 540
Query 728 --CATTAAAC-AT---ATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGACCGTTTCT 781
| || | || |||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 541 GTC-TTGGCCGATCGCTTAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTCT 599
Query 782 GCCTCT 787
||||||
Sbjct 600 GCCTCT 605
> AT5G41500.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16604002-16605213 FORWARD LENGTH=1212
Length=1212
Score = 148 bits (80), Expect = 9e-35
Identities = 223/288 (77%), Gaps = 25/288 (9%)
Strand=Plus/Plus
Query 518 ATCTTGTCGTAGCCCTAAAAT-CTTGAGGTTTATAGATGATTT-CA-ACCGTTACCCGA- 573
||||||||||||| |||| | | |||||||| ||||| |||| || | | | ||||
Sbjct 465 ATCTTGTCGTAGCGTTAAATTAC-TGAGGTTTTTAGATTATTTCCACAAAG-CATCCGAT 522
Query 574 AGAACCCTGCTTTACGGTATGAAATCTACGATTTTGATTC-TGATTTATGGACTACTCTT 632
| |||| | ||| |||||||||||||||||||||| || || ||||||||| ||||||
Sbjct 523 A-AACCAT-TTTTTTGGTATGAAATCTACGATTTTGACTCTTG-TTTATGGACAACTCTT 579
Query 633 GATGTCTTTCCACACTGGCGTATA--TT-GTCCCACCATGGCA-TTTCTCTCAAGGGAAA 688
||| || |||||| ||| ||||| || | | ||| | | | |||| || ||||||||
Sbjct 580 GATATCACTCCACATTGGGGTATATCTTGGACTTACCCTAG-AGTTTCCCTTAAGGGAAA 638
Query 689 CACTTACTGGGGC-G-TTGTAGAACGGAACGC-AAAGG-CACACATTA-AACATATAATC 743
|||||||| || | | | | |||| |||| | ||||| | || | | || ||||||
Sbjct 639 CACTTACT-GGCCTGCTAG-AGAAATGAACACAAAAGGTTTC-CA--AGATCACATAATC 693
Query 744 TGTTTTGATTTTACAAGTGAGAGATTTGGACCGTTTCTGCCTCTTCCT 791
||||||||||||||||||||||||||||| ||| |||| ||||| |||
Sbjct 694 TGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTCTACCTCTACCT 741
Score = 65.8 bits (35), Expect = 1e-09
Identities = 61/73 (84%), Gaps = 4/73 (5%)
Strand=Plus/Plus
Query 889 TTGAGATATGGATTACGACTAAGATTGA-GACCGAAAATG-TCTCTTGGAGCAATTTCTT 946
|||||||||||||||||||||||||||| | | |||| || | || |||||||| |||||
Sbjct 842 TTGAGATATGGATTACGACTAAGATTGACGTC-GAAA-TGGTGTCGTGGAGCAAGTTCTT 899
Query 947 CACAACGAATATG 959
| || | |||||
Sbjct 900 GAGAATGGATATG 912
> AT3G22870.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8096230-8097471 FORWARD LENGTH=1242
Length=1242
Score = 147 bits (79), Expect = 3e-34
Identities = 166/205 (81%), Gaps = 17/205 (8%)
Strand=Plus/Plus
Query 220 TGATGGATTACAATGTTTATTTAATGGGCATTGTCC-TCAAT-GA--AAATCCATCCACA 275
|||||||||||||| ||| ||||||| ||| ||| | ||| || | ||||||| |||
Sbjct 167 TGATGGATTACAATCTTTGTTTAATGAGCA-AATCCTTTAATGGAGGAGATCCATCTACA 225
Query 276 GAG-TCTCTAGATAAACTTACGTGCCTACAAGATTCAGAACAAGTCAAAATTTATC-AAG 333
||| | | || |||||||| || || || | |||||||| ||| |||| | |
Sbjct 226 GAGAT-TAAAGGCAAACTTACTTG-CT--TTGA--C-GAACAAGT--AAAGGTATCTATG 276
Query 334 -TCTTTCATTGTGAGGGTTTATTGTTATGCATCTTGAAAGATGATGATACTAAGGTTGTT 392
| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 277 TTGTTTCATTGCGAGGGTTTATTGTTATGCATCTTGAAAGACGATAATACTAAGGTTGTT 336
Query 393 GTTTGGAATCCGTATTTGGGGCAAA 417
|||||||||||||||||||||||||
Sbjct 337 GTTTGGAATCCGTATTTGGGGCAAA 361
> AT3G23680.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8526366-8527173 REVERSE LENGTH=708
Length=708
Score = 100 bits (54), Expect = 3e-20
Identities = 379/525 (72%), Gaps = 65/525 (12%)
Strand=Plus/Plus
Query 739 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGACCGTTTCTGCCTCTTCCTCTGCCGT 798
|||||||||||||||||||||||||||||||||| || | || ||| ||||||||||
Sbjct 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCC-T--CT---TCTGCCTCTGCCGT 226
Query 799 TTAG-GGATTGGAAGGCACAATG--TGTTTCTC-T-ATCTTCAGTTAGAGACGAGAAGAT 853
|||| || | || | || | || ||| | | | ||||| |||||||| |||||| |
Sbjct 227 TTAGTGG-T-GG--G-CATATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCT 281
Query 854 CGCGGCTTT-CTTTCAAGAAAGGGGAA-CATATA-A-A--A--TTGAGATATGGATTACG 905
|||| ||| ||| || | | | ||| || || | | | |||| ||| |||||||
Sbjct 282 TGCGGTTTTACTT-CA-GCACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACG 339
Query 906 ACTAAGATTGAGACCGAAAATGTCTCT-TGGAGCAATTTCTTCACAACG-AAT-A--TGC 960
|| ||||||||||| | | | || | | |||||||| ||||| | | | || | ||
Sbjct 340 ACCAAGATTGAGACTGGAGAGGTGT-TGTGGAGCAAGTTCTTGAGAGTGGAAACAGCTGG 398
Query 961 CATC--AT-GT-AT-TGGCTAT-AGGCTTAA-G-A-GTTTCTTCATTGAGGAGGAGAA-A 1010
|| || || || | |||| | | || | | ||||||||||||| |||||||| |
Sbjct 399 -ATTTGATAGTTATGTTCCTATTA---TAAATGGAAGTTTCTTCATTGACGAGGAGAAGA 454
Query 1011 CAAGTTGCTGTTGTTTTTGACAAAGAAGGAAAAAATCTATGCGATACTATTCATATCATT 1070
|||| || ||| |||||| | || || || || || | || ||| | ||||||
Sbjct 455 -AAGTCGCCATTGGTTTTGA-A--GATGGGAA---TC---GCCACACAATTAACATCATT 504
Query 1071 GGAGAGGCTGGATGCTTGAGGAAAGTGGAGCT--T-GGAGAACCCACAGaaaaaa-aGTG 1126
||||||||||||| ||||||| | |||| || | ||||| ||| ||| | ||
Sbjct 505 GGAGAGGCTGGATACTTGAGGGCATTGGATCTCGTTGGAGATTATGGAGACCAAAGA-TG 563
Query 1127 TTTGCCACTTGTGTGCTCTTATGTTCCAAGTATAGTGCAAATCAAGCTACATAAAGAAGG 1186
| | || | |||||||||||||||||||| ||||||||||||||| || | ||| |||
Sbjct 564 TAAGACAGATCTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGAGG 623
Query 1187 CAAAAGGAAAGAACAAAGCGA-TTAGGA-AAGACATCAATATGAT 1229
||||| ||||| ||||||| || ||| ||| | || |||||||
Sbjct 624 GGAAAGGGAAGAAGAAAGCGAATT-GGAGAAG-CTTCGATATGAT 666
> AT3G22421.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7949116-7950396 REVERSE LENGTH=1281
Length=1281
Score = 86.1 bits (46), Expect = 7e-16
Identities = 171/228 (75%), Gaps = 21/228 (9%)
Strand=Plus/Plus
Query 738 ATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGACCGTTTCTGCCTCTT-CC-TCTGC 795
||||||||||||||||||||||||||||||||||| ||| || ||||| || || | ||
Sbjct 715 ATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTATGCCT-TTGCCGTTTGT 773
Query 796 C-GTT-TAGGGATTGGAAGGCACAATGTGTTTCTCTATCTTCAGTTAGAGACGAGAAGAT 853
| | || | ||||| | | |||| ||||||||| |||||||| |||||| |
Sbjct 774 TAGATATACGTCC-GGAAG-C-CT-TGTGA--CTCTATCTTGTGTTAGAGAAGAGAAGCT 827
Query 854 CGCGGCTTTCTTTCAAGAAAGGGGAACATATAAAATTGAGATATGGATTACGACTAAGAT 913
|||| ||| ||| | || || || ||||| |||||||||||||||||||
Sbjct 828 TGCGGTTTTGTTTT--GTAAC---AATGC-TACTGTTGAGGTATGGATTACGACTAAGAT 881
Query 914 TGAGACCGA-AA-ATGTCTCTTGGAGCAATTTCTTCACAACGAATATG 959
|||||| || || || | || |||||||| ||||| ||| |||||||
Sbjct 882 TGAGACTGACAAGAT-T-TCGTGGAGCAAGTTCTTGACAGTGAATATG 927
> AT4G09790.1 | Symbols: | pseudogene of the F-box family protein
| chr4:6163414-6164655 REVERSE LENGTH=1242
Length=1242
Score = 56.5 bits (30), Expect = 6e-07
Identities = 30/30 (100%), Gaps = 0/30 (0%)
Strand=Plus/Plus
Query 741 ATCTGTTTTGATTTTACAAGTGAGAGATTT 770
||||||||||||||||||||||||||||||
Sbjct 722 ATCTGTTTTGATTTTACAAGTGAGAGATTT 751
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60491656725
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5