BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925834 Length=328 Score E Sequences producing significant alignments: (Bits) Value AT1G66520.1 | Symbols: pde194 | formyltransferase, putative | c... 353 5e-97 > AT1G66520.1 | Symbols: pde194 | formyltransferase, putative | chr1:24816128-24818744 REVERSE LENGTH=1321 Length=1321 Score = 353 bits (191), Expect = 5e-97 Identities = 224/240 (93%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 36 GTTGCAGCCATTGTTACACATG-CTCCATCAAGTAGAGATAGTGGaaaaaaaGTTTTGCC 94 ||||||| ||||||||||| | |||||||||| |||||||| || |||||||| ||||| Sbjct 217 GTTGCAGGTATTGTTACACA-GCCTCCATCAAGGAGAGATAGGGGTAAAAAAGTGTTGCC 275 Query 95 TTCTCCCGTAGCGCAATATGCTCTTGATAAAGGCTTACCTTCTCATCTCATTTTCTCCCC 154 ||| || ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 276 TTCACCAGTAGCGCAATACGCTCTTGATAAAGGCTTACCTTCTGATCTCATTTTCTCCCC 335 Query 155 TGAGAAGGCAGGAGATGAAGCATTCTTATCGGCTTTAAGAGAGTTGCAACCTGCGCTTTG 214 |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct 336 TGAGAAGGCAGGAGATGAAGCATTTTTATCGGCTTTAAGAGAGTTGCAACCTGAGCTTTG 395 Query 215 TATTACAGCAGGTTATGGGAATATTTTGCCTACTAAGTTCCTTAAGATTCTGGTACATGG 274 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 396 TATTACAGCAGCTTATGGGAATATTTTGCCTACTAAGTTCCTTAAGATTCCGGTACATGG 455 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15281395696 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5