BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925890 Length=826 Score E Sequences producing significant alignments: (Bits) Value AT1G66770.1 | Symbols: SWEET6, AtSWEET6 | Nodulin MtN3 family p... 1136 0.0 > AT1G66770.1 | Symbols: SWEET6, AtSWEET6 | Nodulin MtN3 family protein | chr1:24906451-24907236 REVERSE LENGTH=786 Length=786 Score = 1136 bits (615), Expect = 0.0 Identities = 729/786 (93%), Gaps = 0/786 (0%) Strand=Plus/Plus Query 21 ATGGTACATGCACAGTTGAATCTTATTCGGAAGATTGTAGGAATATTAGGAAACTTCATC 80 ||||| |||| ||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 1 ATGGTGCATGAACAGTTGAATCTTATTCGGAAGATTGTTGGTATATTAGGAAACTTCATC 60 Query 81 TCTCTATGTTTGTTTCTGTCACCAACGCCAACGTTTGTACACATAGTGaaaaaaaaaTCA 140 ||||||||||||||||| || ||||||||||||||| |||||||||||||||| || ||| Sbjct 61 TCTCTATGTTTGTTTCTATCGCCAACGCCAACGTTTATACACATAGTGAAAAAGAAGTCA 120 Query 141 GTGGAAAAATACTCACCAATGCCATATTTAGCCACTCTCCTAAACTGTATGGTTCGGGCT 200 |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||| Sbjct 121 GTGGAAAAATACTCACCATTGCCATATTTAGCGACTCTCCTAAACTGTTTGGTTCGTGCT 180 Query 201 CTTTATGGACTTCCTATGGTTCATCCTGATAGCACCTTGCTCGTTACAATCAGCGGTATA 260 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 181 CTTTATGGACTTCCTATGGTTCATCCTGATAGCACCTTGCTCGTTACAATAAGCGGTATA 240 Query 261 GGAATCGTGATCGAAATCGTTTTCCTTACCATCtttttcgttttttGTGATCGTCAACAA 320 |||||| ||||||||||||||||||||| |||||||| || ||||||| |||||||||| Sbjct 241 GGAATCACGATCGAAATCGTTTTCCTTACAATCTTTTTTGTATTTTGTGGTCGTCAACAA 300 Query 321 CATCGGTTGGTAATATCCGCTGTTTTAACCGTTCAAGCTGCGTTTGTGGCTACTCTTGCG 380 ||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||| Sbjct 301 CATCGGTTGGTAATATCCGCTGTTTTAACCGTTCAAGTTGTGTTTGTGGCTACCCTTGCG 360 Query 381 GTTTTGGTATTAACCCTCGAACACACTACCGAACAACGGACAATAAGCGTTGGGATTGTT 440 |||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 361 GTTTTGGTCTTAACTCTCGAACACACTACCGATCAACGGACGATAAGCGTTGGGATTGTA 420 Query 441 TCTTGCGTTTTCAACGCTATGATGTATGCTTCTCCATTGTCCGTCATGAAAATGGTAATA 500 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 421 TCTTGCGTTTTCAACGCTATGATGTATGCTTCTCCATTGTCTGTCATGAAAATGGTAATA 480 Query 501 AAAACAAAAAGTTTAGAGTTCATGCCGTTTTTGTTATCCGTAGTTAGTTTTATAAATGCA 560 |||||||||||||| ||||||||||||||||||||||| |||||| ||||| |||| ||| Sbjct 481 AAAACAAAAAGTTTGGAGTTCATGCCGTTTTTGTTATCGGTAGTTGGTTTTCTAAACGCA 540 Query 561 GGTGTTTGGACAATTTATGGCTTTGTGCCTTTTGATCCATTTTTGGCTATTCCAAATGGG 620 ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct 541 GGTGTTTGGACAATTTATGGCTTTGTGCCTTTTGATCCATTCCTGGCTATACCAAATGGG 600 Query 621 ATTGGGTGTGTGTTTGGACTAGTACAATTAATATTGTATGGTACCTACTATGAATCCACC 680 ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||| Sbjct 601 ATTGGGTGTGTTTTTGGACTAGTACAGTTAATATTGTATGGTACCTACTACAAATCTACC 660 Query 681 AAAGGGATAATGGCGGAAAGGAAGGAGCGACTCGGCTACGTTGGTGAAGTTGGGTTATCT 740 ||||||||||||| |||||||||| | |||||||| |||||||||||||| || ||||| Sbjct 661 AAAGGGATAATGGAGGAAAGGAAGAACCGACTCGGTTACGTTGGTGAAGTCGGATTATCC 720 Query 741 ATTGCGATCGGTCAAACGGAACCTGAGAACATCGCATATTTCAACAAAAGAGTTAACGGT 800 | |||||||| |||||| ||||| ||||||||| ||||||| ||||||||||||| ||| Sbjct 721 AATGCGATCGCTCAAACTGAACCCGAGAACATCCCATATTTAAACAAAAGAGTTAGCGGC 780 Query 801 GTTTGA 806 |||||| Sbjct 781 GTTTGA 786 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40237551747 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5