BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg925912
Length=873
Score E
Sequences producing significant alignments: (Bits) Value
AT1G66900.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1387 0.0
AT5G38220.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 745 0.0
> AT1G66900.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:24959334-24961616 FORWARD LENGTH=1398
Length=1398
Score = 1387 bits (751), Expect = 0.0
Identities = 835/876 (95%), Gaps = 3/876 (0%)
Strand=Plus/Plus
Query 1 TTTATGAATTAGAA-T--TCATCATGGGAGGTGTAACATCATCGATCGCTGCAAAATTCG 57
|||||||||||||| | |||||||||||||||| ||||||||||||||||| ||||| |
Sbjct 196 TTTATGAATTAGAATTCATCATCATGGGAGGTGTTACATCATCGATCGCTGCTAAATTTG 255
Query 58 CTTTCTTTCCACCAACTCCACCGTCTTACGAGGTTATAGCCGACGATAGCTGCGGCGGAC 117
|||||||||||||||| |||||||| || |||||||||||||||||||||||||| ||||
Sbjct 256 CTTTCTTTCCACCAACGCCACCGTCGTATGAGGTTATAGCCGACGATAGCTGCGGTGGAC 315
Query 118 GTTTATACATACCGGAGATTCCTCGTCGTGATGATGTTGATATCTTAAAGCTACGTACTC 177
||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||
Sbjct 316 GTTTATACATACCGGAGATTCCTCGCCGTGATGATGTTGATATATTGAAGCTTCGTACTC 375
Query 178 GTTGTGGTAATGAGATCGTAGCTGTTTATGTGAAACATTCAAAAGCTAATGGCACGCTTT 237
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 376 GTTGTGGTAATGAGATCGTTGCTGTTTATGTGAAACATTCAAAAGCTAATGGCACGCTTT 435
Query 238 TGTATTCTCATGGTAACGCTGCTGATTTGGGTCAAATGTTTGAGCTTTTCGTTGAGCTTA 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 436 TGTATTCTCATGGTAACGCTGCTGATTTGGGTCAAATGTTTGAGCTTTTCGTTGAGCTTA 495
Query 298 GCAATCGCCTTCGCGTCAATCTTATGGGGTATGATTACTCTGGTTATGGTCAGTCTACTG 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 GCAATCGCCTTCGCGTCAATCTTATGGGGTATGATTACTCTGGTTATGGTCAGTCTACTG 555
Query 358 GACAGGCAAGCGAGTGTAATACATATGCTGATATAGAGGCGTCGTATAAGTGCCTTAAGG 417
||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| ||||
Sbjct 556 GACAGGCTAGCGAGTGTAATACATATGCTGATATAGAGGCATCATATAAATGCCTCAAGG 615
Query 418 AAAAGTATGGTGTAAAAGACGATCAACTGATACTATATGGTCAATCTGTCGGTAGTGGAC 477
||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 616 AAAAGTACGGTGTAAAAGACGATCAACTGATAGTATATGGTCAATCTGTTGGTAGTGGAC 675
Query 478 CTACGGTTGATCTAGCTTCGCGCACACCTAACTTGCGAGGCGTGGTTTTACAGTGCCCGA 537
||||||||||||||||||| |||||||||||||| ||||||||||||||||||| || |
Sbjct 676 CTACGGTTGATCTAGCTTCACGCACACCTAACTTAAGAGGCGTGGTTTTACAGTGTCCTA 735
Query 538 TTCTGTCTGGGATGAGGGTTTTGTATCCGGTGAAATGTACATATTGGTTTGATATTTACA 597
| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 736 TCCTGTCTGGGATGAGGGTTTTGTATCCTGTGAAATGTACATATTGGTTTGACATTTACA 795
Query 598 AGAATATTGACAAAATCGGCGCAGTTACCTGTCCTGTATTAGTAATCCATGGAACTGCGG 657
||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 796 AGAATATTGACAAGATCGGCTCAGTTACCTGTCCTGTATTAGTAATCCATGGTACTGCGG 855
Query 658 ATGAAGTAGTTGATTGGTCTCACGGAAAACGGCTCTGGGAACTCAGCAAAGAGAAGTATG 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 856 ATGAAGTAGTTGATTGGTCTCACGGAAAACGGCTCTGGGAACTCAGCAAAGAGAAGTATG 915
Query 718 AACCTTTGTGGATAAGTGGAGGTGGACACTGCGACCTTGAACTCTATCCAGATTTCATCA 777
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 916 AACCTTTGTGGATAAGTGGAGGTGGACACTGTGACCTTGAACTCTATCCAGATTTCATCA 975
Query 778 GACATCTGAAGAAATTTGTTGTATCACTTGGCAACAAACAAGCAGAGCAAGCTGCCACAG 837
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 976 GACATCTGAAGAAATTTGTTGTATCACTTGGCAACAAACAAGCAGAGCAAGCTCCCACAT 1035
Query 838 AGCGAAATAGCTGATATGTTTGAAACGAGTTACTTT 873
||||| ||||||||||||||||||| | |||| |||
Sbjct 1036 AGCGAGATAGCTGATATGTTTGAAATGGGTTATTTT 1071
> AT5G38220.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:15268868-15271353 FORWARD LENGTH=1368
Length=1368
Score = 745 bits (403), Expect = 0.0
Identities = 659/781 (84%), Gaps = 23/781 (3%)
Strand=Plus/Plus
Query 19 TCATGGGAGGTGTAACATCATCGATCGCTGCAAAATTCGCTTTCTTT-CCACCAACTCCA 77
|||||||||| ||||| ||||| |||||||||||||||||||| ||| || ||| | |||
Sbjct 143 TCATGGGAGGAGTAACTTCATCAATCGCTGCAAAATTCGCTTT-TTTCCCGCCATCACCA 201
Query 78 CCGTCTTA-CGAGGTTATAGCCGACGATAGCTGCGGCGGACGTTTATACAT-ACCGGAGA 135
|||||||| || || | |||||| | | | | || |||||||| || | ||
Sbjct 202 CCGTCTTATGGA-TTTGTTTCCGACG-T---T--GAC---CGATTATACATAACAGAAG- 250
Query 136 TTCCTCGTCGTGATGATGTTGATATCTTAAAGCT-ACGTACTCGTTGTGGTAATGAGATC 194
| ||||| ||||||||||| ||| | || ||||| | | |||||| ||||||| |||||
Sbjct 251 TACCTCGCCGTGATGATGTAGATGTATTGAAGCTAAAG-ACTCGTCGTGGTAACGAGATT 309
Query 195 GTAGCTGTTTATGTGAAACATTCAAAAGCTAATGGCACGCTTTTGTATTCTCATGGTAAC 254
|||||| ||||| | |||||| | ||||||||||| |||||||||||||| |||||||||
Sbjct 310 GTAGCTATTTATATTAAACATCCTAAAGCTAATGGTACGCTTTTGTATTCACATGGTAAC 369
Query 255 GCTGCTGATTTGGGTCAAATGTTTGAGCTTTTCGTTGAGCTTAGCAATCGCCTTCG-CGT 313
|||||||||||||||||||||||||||||||| | || ||||| ||||| || || | |
Sbjct 370 GCTGCTGATTTGGGTCAAATGTTTGAGCTTTTTATCGAACTTAGTAATCGTCTCCGACTT 429
Query 314 CAATCTTATGGGGTATGATTACTCTGGTTATGGTCAGTCTACTGGACAGGCAAGCGAGTG 373
||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || ||
Sbjct 430 -AATCTCATGGGGTATGATTACTCTGGTTATGGTCAGTCTACTGGAAAGGCAAGTGAATG 488
Query 374 TAATACATATGCTGATATAGAGGC-GTCGTATAAGTGCCTTAAGGAAAAGTATGGTGTAA 432
|||||| |||||||||||||| || | | |||| ||||| |||||| | ||||||||||
Sbjct 489 TAATACCTATGCTGATATAGATGCAG-CATATACTTGCCTCAAGGAACATTATGGTGTAA 547
Query 433 AAGACGATCAACTGATACTATATGGTCAATCTGTCGGTAGTGGACCTACGGTTGATCTAG 492
|||| |||||||||||| |||||||||| ||||| ||||||||||| ||| ||||| |||
Sbjct 548 AAGATGATCAACTGATATTATATGGTCAGTCTGTTGGTAGTGGACCAACGATTGATTTAG 607
Query 493 CTTCGCGCACACCTAACTTGCGAGGCGTGGTTTTACAGTGCCCGATTCTGTCTGGGATGA 552
|||| ||||| ||||| |||||||| |||||||| || |||| ||||| ||||||||||
Sbjct 608 CTTCACGCACGCCTAATTTGCGAGGAGTGGTTTTGCACAGCCCTATTCTCTCTGGGATGA 667
Query 553 GGGTTTTGTATCCGGTGAAATGTACATATTGGTTTGATATTTACAAGAATATTGACAAAA 612
| |||||||||||||| ||| |||| ||||||||||| |||||||||||||||||||| |
Sbjct 668 GAGTTTTGTATCCGGTTAAACGTACCTATTGGTTTGACATTTACAAGAATATTGACAAGA 727
Query 613 TCGGCGCAGTTACCTGTCCTGTATTAGTAATCCATGGAACTGCGGATGAAGTAGTTGATT 672
|||| ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||
Sbjct 728 TCGGTGCAGTTACCTGTCCTGTCTTAGTAATCCATGGGACTGCAGATGAAGTGGTTGATT 787
Query 673 GGTCTCACGGAAAACGGCTCTGGGAACTCAGCAAA-GAGAAGTATGAACCTTTGTGGATA 731
| ||||| ||||||| || |||||||| |||| || |||||||| ||||| ||| ||
Sbjct 788 GTTCTCATGGAAAACAACTTTGGGAACTTT-CAAAAGAAAAGTATGAGCCTTTATGGGTA 846
Query 732 AGTGGAGGTGGACACTGCGACCTTGAACTCTATCCAGATTTCATCAGACATCTGAAGAAA 791
|||||| ||||||||| | || |||||||||||||| ||||| | |||||||||||||
Sbjct 847 TCTGGAGGAGGACACTGCAATCTAGAACTCTATCCAGAGTTCATAAAACATCTGAAGAAA 906
Query 792 T 792
|
Sbjct 907 T 907
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 42598556656
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5