BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925969 Length=1336 Score E Sequences producing significant alignments: (Bits) Value AT1G67270.1 | Symbols: | Zinc-finger domain of monoamine-oxida... 771 0.0 AT1G67780.1 | Symbols: | Zinc-finger domain of monoamine-oxida... 259 5e-68 > AT1G67270.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A repressor R1 protein | chr1:25183177-25185939 REVERSE LENGTH=1772 Length=1772 Score = 771 bits (417), Expect = 0.0 Identities = 551/611 (90%), Gaps = 27/611 (4%) Strand=Plus/Plus Query 711 GGGTGTTACTGCGTATG-GAACATGAATGCATCAAGAAAGCTCAAGCTTCTAAATTTCTT 769 ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct 1100 GGGTGTTGCTGCGTATGAGAAGATGAATGCATCAAGAAAGCTCAAGCTTCTAAATTTCTT 1159 Query 770 ATGTGATGAATCACTTAGCACATGGGCAATGAGGAATTACATTAAA-AGCCAAACTAG-A 827 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | | Sbjct 1160 ATGTGATGAATCACTTAGCACATGGGCAATGAGGAATTACA-TAAATAGCCAAACT-GAA 1217 Query 828 GAGTGTGGAGAACagaaaaaagaagctaaagaaaaagcttcagccgcaaaag-aaaagga 886 ||||||||||||| |||||| ||||||||| |||| ||| ||||||| |||| ||||||| Sbjct 1218 GAGTGTGGAGAACGGAAAAAGGAAGCTAAACAAAAGGCTGCAGCCGC-AAAGCAAAAGGA 1276 Query 887 gaaggagctcaaac-----a---aa--T---GTTG-C-AA--GGTGA-GGAGAAAAACGG 928 |||| ||||||||| | || | |||| | || | | |||||||||||| Sbjct 1277 GAAGCAGCTCAAACAGAAGATGCAAGGTGAGGTTGCCAAATCCATTATGGAGAAAAACGG 1336 Query 929 AGCTCCATTGTTTATTGAGGAACACAAGTCAGTTGTGTCTCAAATAAGAGATGAAGCTAA 988 ||||||||||| ||||||||||||||| ||| | |||||||||||||||||||||||||| Sbjct 1337 AGCTCCATTGTCTATTGAGGAACACAACTCAATCGTGTCTCAAATAAGAGATGAAGCTAA 1396 Query 989 AAAAGCTCATGAAGAAATGATAGAGGCAAAGGGCATGAAATCTGGAATGACGCTTATATG 1048 | ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct 1397 AGAAGCTCATGAAGAAATGATGGAGGCAAAGGGCATGAAATCTAAAATGACGCTTATATG 1456 Query 1049 TGATGCGCGTAGAACGGAACCAATCATGTTGGATGATAATGGTTTTGTTCTCTGGAAATT 1108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1457 TGATGCGCGTAGAACGGAACCAATCATGTTGGATGATAATGGTTTTGTTCTCTGGAAATT 1516 Query 1109 GAAGTGTTTTGAAGAAGAACAAAtttttttGCTTCAAGATCTAGGAACATTTGATGATTT 1168 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1517 GAAGTGTTTTGAAGAAGAACAATTTTTTTTGCTTCAAGATCTAGGAACATTTGATGATTT 1576 Query 1169 ATGTCCACATGAAAAATGGCTAACTTTTAAGCCTGAGCAGAAACCAGAGATAGAGAAATA 1228 |||||||||||||| |||| || ||||||| |||||||||||||||||||||||||| || Sbjct 1577 ATGTCCACATGAAAGATGGTTAGCTTTTAAACCTGAGCAGAAACCAGAGATAGAGAA-TA 1635 Query 1229 TATCTCTTCCAAGAGG-AGGAAACTGATGCGAACAcaaaagaaagcaaatgcaaaaaaga 1287 |||||||| |||||| | ||||||||||| || ||||||||| | |||| | ||||||| Sbjct 1636 TATCTCTTGTAAGAGGTAAGAAACTGATGCAAATACAAAAGAATGAAAATCCGAAAAAGA 1695 Query 1288 atgcaaatgcg 1298 ||||||||||| Sbjct 1696 ATGCAAATGCG 1706 Score = 340 bits (184), Expect = 2e-92 Identities = 208/220 (95%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 490 GGAAAAAAGCCAAATCCAGTGACAAACTGAAAGAGGAGATTCAGTTTGAGGCTCAACTTC 549 |||| | ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 688 GGAAGAGAGCCAAACCCAGTGACAAACTGAAAGAGGAGATTCAGCTTGAGGCTCAACTTC 747 Query 550 CTCAGGGTATAAGCTTGACTTGTGTTTCAGGCATTGATATACCAGCTGAAGAAGCTGGAA 609 || |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 748 CTGAGGGTATAAGCTTGACTTGTGTTTCACGCATTGATATACCAACTGAAGAAGCTGGAA 807 Query 610 ATGTATGTCAGCTTTTCGAGTTTTGCTCTGCTTTTGGAAAGGTTCTTGCTTTGAAGGAAG 669 |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| Sbjct 808 ATGTATGTCAGCTTTTCGAGTTTTGCTCAGCCTTTGGAAAGGCACTTGCTTTGAAGGAAG 867 Query 670 AACATGCTGAAACTATTGTCCGTGAGCTGTTTATATGTGG 709 ||||||||||||||||||||||||||||||||||||||| Sbjct 868 GACATGCTGAAACTATTGTCCGTGAGCTGTTTATATGTGG 907 Score = 265 bits (143), Expect = 1e-69 Identities = 182/201 (91%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 6 TAATTTACTGTTGTTATGGCGAAAAAGCGTGAAACCAATCCTGGTGTTAGAATCATCGGA 65 ||||||||||||||||||| || |||||||||||||||||| ||||||||| | ||||| Sbjct 132 TAATTTACTGTTGTTATGGTGAGAAAGCGTGAAACCAATCCCGGTGTTAGAGTTGTCGGA 191 Query 66 CGAAGAATATATGACTCCAAAAATGGCAAATCATGTCACCAGTGTCGACAAAAGACTCTT 125 |||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 192 AAAAGAATTTATGACTCCCAAAATGGCAAATCATGTCACCAGTGTCGACAGAAGACTCTT 251 Query 126 GACTTTGCTGCACCATGCAAGGTCA-TGAAGAGGAACAAGCTATGTCCCATTAAGTTTTG 184 |||||||||||||| ||||||| || ||| |||||| |||||||||||||| |||||||| Sbjct 252 GACTTTGCTGCACCGTGCAAGG-CAATGAGGAGGAAGAAGCTATGTCCCATAAAGTTTTG 310 Query 185 TTATAAATGCTTATCAAACAG 205 ||| ||||||||||||| ||| Sbjct 311 TTACAAATGCTTATCAATCAG 331 Score = 135 bits (73), Expect = 8e-31 Identities = 83/88 (94%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 291 AGGTATGGTGAAAATGCAGAAGAAGTAGCAAAGTTGGATGATTGGATATGTCCACTGTGT 350 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 330 AGGTATGGTGAAAATGCAGAAGAAGTAGCAAAGTTGGATGATTGGATATGTCCTCTGTGC 389 Query 351 AGAGGCATCTGTATCTGCAGTGTGTGCA 378 ||||||||||| ||||| ||||| |||| Sbjct 390 AGAGGCATCTGCATCTGTAGTGTATGCA 417 Score = 91.6 bits (49), Expect = 2e-17 Identities = 68/77 (88%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 416 GGATTA-TCTTCAGTCTATGAACTTCTTGAAGTTGAAGGGCATGATAAGTTTGCTTATCA 474 ||| || || |||||||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct 474 GGA-TATTCCTCAGTCTATGCGCTTCTTGAAGCTGAGGGGCATGATAAGTTTGCTTATCA 532 Query 475 GAAGAAGCCAAAACTGG 491 |||||| ||| |||||| Sbjct 533 GAAGAAACCAGAACTGG 549 > AT1G67780.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A repressor R1 protein | chr1:25412816-25415530 FORWARD LENGTH=1539 Length=1539 Score = 259 bits (140), Expect = 5e-68 Identities = 184/205 (90%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 495 AAAGCCAAAT-CCAGTGACAAACTGAAAGAGGAGATTCAGTTTGAGGCTCAACTTCCTCA 553 |||||| ||| ||| | |||| |||||||||||||||||||||||||||||||||||||| Sbjct 538 AAAGCC-AATGCCACTCACAAGCTGAAAGAGGAGATTCAGTTTGAGGCTCAACTTCCTCA 596 Query 554 GGGTATAAGCTTGACTTGTGTTTCAGGCATTGATATACCAGCTGAAGAAGCTGGAAATGT 613 |||||||||||||| || ||| |||||| ||| ||||||| ||||||||||||||||||| Sbjct 597 GGGTATAAGCTTGATTTCTGTGTCAGGCGTTGTTATACCAACTGAAGAAGCTGGAAATGT 656 Query 614 ATGTC-AGCTTTTCGAGTTTTGCTCTGCTTTTGGAAAGGTTCTTGCTTTGAAGGAAGAAC 672 || || ||||||||||||||||||| || |||||||||| ||||| |||||||||| || Sbjct 657 AT-TCCAGCTTTTCGAGTTTTGCTCAGCCTTTGGAAAGGCTCTTGAGTTGAAGGAAGGAC 715 Query 673 ATGCTGAAACTATTGTCCGTGAGCT 697 | ||||||||| ||||||||||||| Sbjct 716 AAGCTGAAACTGTTGTCCGTGAGCT 740 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65762713950 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5