BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg926031

Length=236
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G67670.1 | Symbols:  | unknown protein; BEST Arabidopsis tha...   339    9e-93


> AT1G67670.1 | Symbols:  | unknown protein; BEST Arabidopsis thaliana 
protein match is: unknown protein (TAIR:AT1G24405.1); 
Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; 
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses 
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:25365473-25365667 
FORWARD LENGTH=195
Length=195

 Score =  339 bits (183),  Expect = 9e-93
 Identities = 191/195 (98%), Gaps = 0/195 (0%)
 Strand=Plus/Plus

Query  22   ATGGATTCGGGGCCGTCGTGGGCTGATCAATGGGATTACAATAACCCTGACCCTCTTCCG  81
            |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  1    ATGGATTCAGGGCCGTCGTGGGCTGATCAATGGGATTACAATAACCCTGACCCTCTACCG  60

Query  82   AGTTCGGCgaaagaggatgagagcaaaaagaagaacaagaagaagaaggaagaagatgga  141
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   AGTTCGACGAAAGAGGATGAGAGCAAAAAGAAGAACAAGAAGAAGAAGGAAGAAGATGGA  120

Query  142  agcaaaagCAGTCTTGGGAAGACATTACTTGGGTTCAAATGGATGAAAGAGCTCCGCAAG  201
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  121  AGCAAAAGCAGTCTTGGGAAGACATTACTTGGGTTCAAATGGATGAAGGAGCTCCGCAAG  180

Query  202  AAATCTGAAAAGTGA  216
            |||||||||||||||
Sbjct  181  AAATCTGAAAAGTGA  195



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 10656762788


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5