BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926055
Length=1259
Score E
Sequences producing significant alignments: (Bits) Value
AT1G67850.1 | Symbols: | Protein of unknown function (DUF707) ... 1988 0.0
AT1G24570.1 | Symbols: | Protein of unknown function (DUF707) ... 693 0.0
AT1G13000.1 | Symbols: | Protein of unknown function (DUF707) ... 459 4e-128
> AT1G67850.1 | Symbols: | Protein of unknown function (DUF707)
| chr1:25437900-25442142 FORWARD LENGTH=1933
Length=1933
Score = 1988 bits (1076), Expect = 0.0
Identities = 1189/1244 (96%), Gaps = 6/1244 (0%)
Strand=Plus/Plus
Query 18 AGAAGACATGGGAATATTTTCACGCAGTTCAATTAGTAGGAAATCAAAAGATGGAATGAA 77
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 AGAAGATATGGGAATCTTTTCACGCAGTTCAATTAGTAGGAAATCAAAAGATGGAATGAA 533
Query 78 GATCATCGCAACTGCATTTTTTGGAGTAAC-TTTCGGCTTTCTGATTGGAATATCTTTTC 136
|||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 534 GATCATTGCAACGGCATTTTTTGGAGTAACATTT-GGCTTTCTGATTGGAATATCTTTTC 592
Query 137 CATCATTATCAATCACTAAGGTGAGTCTCCCAACAAACTTTCTTCCTTCAAACGATCTCT 196
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 593 CATCATTATCAATCACTAAGGTGAGTCTCCCTACAAACTTTCTTCCTTCAAACGATCTCT 652
Query 197 CATCTATCGAGGAAAAGGGTTCGAAAATTGCAACTCCAGAAAGTCATAAAGCTTGGTCAT 256
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 CATATATCGAGGAAAAGGGTTCGAAAATTGCAACTCCAGAAAGTCATAAAGCTTGGTCAT 712
Query 257 CATCAAAGGGTAACGATAGCAGCTCATCCGCTCCAATCGACAAATCAAAGATCTGGGTTC 316
|||||||||||||||||||||||||||| |||| || |||||||||||||||||||| |
Sbjct 713 CATCAAAGGGTAACGATAGCAGCTCATCTACTCCGATTGACAAATCAAAGATCTGGGTAC 772
Query 317 CTTCAAATCCTCGTGGTGCTGAAATGTTGCCACCGGGTATGGTTGCTGCTGAATCAGACT 376
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 CTTCTAATCCTCGTGGTGCTGAAATGTTGCCACCGGGTATGGTTGCTGCTGAATCAGACT 832
Query 377 TCTATTTGCGCAGATTATGGGGGTTACCGCAGGAGGATTTGACCAGTGAACCAAGATACC 436
|||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||
Sbjct 833 TCTATTTGCGCAGATTATGGGGTTTACCGCATGAGGATTTGAAAAGTGAACCAAGATACC 892
Query 437 TCGCAACGTTTACAGTGGGTATTAATCAGAAAGCAAATATTGATGCTTGTGTCAAGAAGT 496
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 893 TCGCAACATTTACAGTGGGTATTAATCAGAAAGCAAATATCGATGCTTGTGTCAAGAAGT 952
Query 497 TTTCAGAAAACTTCACTATTGTCCTGTTTCACTATGACGGTCAAGTAACCGAGTGGGATG 556
|||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||
Sbjct 953 TTTCAGAAAACTTCACTATTGTCCTGTTTCACTATGACGGCCGGGTAACTGAGTGGGATG 1012
Query 557 AGTTTGAATGGTCGAAGACTGCTATACACATTAGCGTGCGAAAGCAGACAAAATGGTGGT 616
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1013 AGTTTGAATGGTCAAAGACTGCTATACACATTAGCGTACGAAAGCAGACAAAATGGTGGT 1072
Query 617 ATGCAAAGAGGTTTTTGCACCCTGATATTGTAGCACGATATGATTATATCTTCATCTGGG 676
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1073 ATGCAAAGAGGTTTTTGCACCCTGATATTGTAGCAAGATATGATTATATCTTCGTCTGGG 1132
Query 677 ATGAAGACCTTGGG-GTCGAGCATTTTAATGCAGAAGAGTACATAAAGATGGTGAAGAAG 735
|||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 1133 ATGAAGACCT-GGGTGTCGAGCATTTTAACGCAGAAGAGTACGTAAAGATGGTGAAGAAG 1191
Query 736 CATGGCCTGGAGATTTCCCAACCTGGCTTGGAACCAAACCAGGGATTAACGTGGCAGATG 795
|| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 1192 CACGGCCTGGAGATTTCCCAACCTGGCTTGGAACCAAACCAGGGACTAACGTGGCAAATG 1251
Query 796 ACAAAGAGACGAGGAGATATGGAAGTCCACAAGATAACAGAAGAAAGACCTGGATGGTGC 855
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1252 ACAAAGAGACGAGGAGATATGGAAGTTCACAAGATAACAGAAGAAAGACCTGGATGGTGC 1311
Query 856 TCAGATCCTCATCTCCCTCCATGTGCTGCATTCGTTGAGATCATGGCTCCTGTATTTTCA 915
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1312 TCAGATCCTCATCTCCCTCCATGTGCTGCATTCGTAGAGATCATGGCTCCTGTATTTTCA 1371
Query 916 AGAAACGCTTGGCGATGCGTGTGGCACGTGATCCAGAATGATTTGGTTCACGGTTGGGGC 975
||||| || ||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1372 AGAAATGCCTGGCGATGCGTGTGGCATGTGATCCAGAATGATTTGGTACACGGTTGGGGT 1431
Query 976 CTTGACTTTGCACTCAGAAGATGTGTTGAGCCTGCACATGAGAAGATAGGAGTAGTAGAT 1035
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1432 CTTGACTTTGCACTCAGAAGATGTGTTGAGCCTGCACATGAGAAGATAGGAGTAGTTGAT 1491
Query 1036 TCTCAGTGGGTCGTTCATCAATCTTTTCCTTCCCTTGGCAACCAAGGTGAGGCAACGGAC 1095
||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1492 TCTCAATGGGTCGTTCATCAATCTTTTCCTTCCCTTGGCAACCAAGGTGAGGCGACAGAC 1551
Query 1096 GGGAAAGCGCCATGGCAAGGGGTAAGGGATAGATGCAAAAAGGAATGGACAATGTTCCAG 1155
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1552 GGGAAAGCACCATGGCAAGGGGTGAGGGATAGATGCAAAAAGGAATGGACAATGTTCCAG 1611
Query 1156 AGTAGAATGGCTAACGCGGAGAAGGATTATTTCAAATCCTTACAAGTAGAAGGCTCCTCA 1215
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1612 AGTAGAATGGCTAACGCAGAGAAGGATTATTTCAAATCCTTACAAGTAGAAGGCTCCTCA 1671
Query 1216 AATTCAACAGCAACAACCATTTAAAATAGGAGAGAACTTTAAGT 1259
||||||||||| |||||||||||| |||||||| ||| ||||
Sbjct 1672 AATTCAACAGCCACAACCATTTAA--TAGGAGAGTTCTTAAAGT 1713
> AT1G24570.1 | Symbols: | Protein of unknown function (DUF707)
| chr1:8707197-8709589 FORWARD LENGTH=1244
Length=1244
Score = 693 bits (375), Expect = 0.0
Identities = 726/888 (82%), Gaps = 54/888 (6%)
Strand=Plus/Plus
Query 367 GAATCAGACTTCTATTTGCGCAGATTATGGGGGTTA-CC-GCAGGAGGATTTGA-CCAGT 423
||||| ||||| || |||||||||||||||||| | || | | |||||||| | |
Sbjct 271 GAATCGGACTTGTACTTGCGCAGATTATGGGGG-AACCCTG-ATGAGGATTT-AGTGAAA 327
Query 424 GAACCAAGATACCTCGCAACGTTTACAGTGGG-TATTAATCAGAAAGCA-AATATTGATG 481
|||| ||||| || ||||| ||||||||||| || |||||||| | || ||||| ||||
Sbjct 328 CAACCGAGATATCTAGCAACATTTACAGTGGGTTA-TAATCAGAGA-CACAATATAGATG 385
Query 482 CTTGTGTCAAG-AAGTTTTCAGAAAACTTCACTATTGTCCTGTTTCACTATGA-CG-GT- 537
| ||||| || ||||||||||| ||||| |||||||| |||||||| ||||| | ||
Sbjct 386 CGTGTGT-TAGCAAGTTTTCAGAGAACTTTACTATTGTTCTGTTTCATTATGATGGCGTA 444
Query 538 -CAAGT-AACCGAGTGGGATGAGTTTGAATGGTCGAAGACTGCTATACACATTAGCGTGC 595
||||| | || | ||||||||||| ||||||| || ||| |||||||| || || |
Sbjct 445 ACAAGTGCATGGAAT--GATGAGTTTGAGTGGTCGAGGAATGCAATACACATAAGTGT-C 501
Query 596 -GAAAGCAGACAAAATGGTGGTATGCAAAGAGGTTTTTGCACCCTGATATTGTAGCACGA 654
|||||||||||||||||||||||||||||| || |||||||| || ||||||||||||
Sbjct 502 AAAAAGCAGACAAAATGGTGGTATGCAAAGAGATTCTTGCACCCGGACATTGTAGCACGA 561
Query 655 TATGATTATATCTTCATCTGGGATGAAGACCTTGGGGTCGAGCATTTTAATGCAGAAGAG 714
|| |||||||| ||||| |||||||| || ||||| || || || ||||||||||||||
Sbjct 562 TACGATTATATATTCATATGGGATGAGGATCTTGGAGTTGATCACTTTAATGCAGAAGAA 621
Query 715 TACATAAAGATGGTGAAGAAGCATGGCCTGGAGATTTCCCAACCTGGCTTGGAACCA-A- 772
|||||| | || ||||||||||| | ||| |||||||| || ||||| ||||| ||| |
Sbjct 622 TACATACACATAGTGAAGAAGCACGACCTTGAGATTTCGCAGCCTGGTTTGGACCCAGAG 681
Query 773 ACCAGGGATTAACGTGGCAGATGAC-AAAGAGACGAGGAGATA-TGGAAGTCCACAAG-A 829
|| ||| |||| |||||||| || ||| ||| ||| | ||| || ||||||||||| |
Sbjct 682 ACT-GGGTTTAAT-TGGCAGATCACCAAA-AGAAGAGAACATAGTG-AAGTCCACAAGGA 737
Query 830 TAACAGAAGA-AAGACCTGGA-TGGTGCTC-AGATCCTCATCTCCCTCCATGTGCTGCAT 886
| |||| || || || | || |||||||| | |||||| | ||||||||||||||||
Sbjct 738 GA-CAGATGAGAA-AC-TCGACTGGTGCTCTA-ATCCTCCCCGGCCTCCATGTGCTGCAT 793
Query 887 TCGTTGAGATCATGGCTCCTGTATTTTCAAGAAACGCTTGGCGATGCGTGTGGCACGTGA 946
|||| ||||| |||||||||||||| |||||| | || ||||| ||||||||||| |||
Sbjct 794 TCGTGGAGATAATGGCTCCTGTATTCTCAAGAGATGCATGGCGCTGCGTGTGGCATATGA 853
Query 947 TCCAGAATGATTTGGTTCACGGTTGGGGCCTTGACTTTGCACTCAGAAGATGTGTTGAG- 1005
|||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 854 TCCAGAATGATTTGGTTCACGGTTGGGGTCTTGACTTTGCACTGAGAAGATGTGTTGAGG 913
Query 1006 --CCTGCACATGAGAAGATAGGAGTAGTAGATTCTCAGTGGGTCGTTCATCAATCTTTTC 1063
|||||| ||||||||||||| ||||||| || |||||| |||||||||||| || ||
Sbjct 914 AGCCTGCATTTGAGAAGATAGGAATAGTAGACTCACAGTGGATCGTTCATCAAT-TTATC 972
Query 1064 C-TTCCCTTGGCAACCAAGGTGAG-GCA-ACGGACGGGAAAGCGCCATGGCAAGGGGTAA 1120
| ||||||||||||||| || || ||| | |||||||||| |||||||||||||| |
Sbjct 973 CCTTCCCTTGGCAACCAGGG-GAAAGCAGATA-ACGGGAAAGCACCATGGCAAGGGGTGA 1030
Query 1121 GGGATAGATG-CAAAAAGGAATGGACAATGTTCCAGAGTAGAATGGCTAA-C-GCGGAGA 1177
|||||||||| |||| |||||||| ||||||| ||| ||| ||| || | ||||| |
Sbjct 1031 GGGATAGATGTCAAAT-GGAATGGAAAATGTTCGAGAACAGAGTGG--AAGCCGCGGAAA 1087
Query 1178 AGGATTATTTCAAATCCTTACAAGTAGAAGGCTCC-TCAAATTCAACA 1224
|||||||||||| ||| |||||||| ||| || || || |||||||||
Sbjct 1088 AGGATTATTTCAGATCGTTACAAGTTGAAAGC-CCATCCAATTCAACA 1134
> AT1G13000.1 | Symbols: | Protein of unknown function (DUF707)
| chr1:4436105-4439464 REVERSE LENGTH=1901
Length=1901
Score = 459 bits (248), Expect = 4e-128
Identities = 700/913 (77%), Gaps = 52/913 (6%)
Strand=Plus/Plus
Query 304 AAGATCTGGGTTCCTTCAAATCCTCGTGGTGCTGAAATGTTGCCACCGGGTATGGTTGCT 363
||||| |||||||| || ||||| || ||||| || ||| || | || ||||| ||||
Sbjct 690 AAGATTTGGGTTCCATCGAATCCCCGAGGTGCAGAGATGCTGACTCCTGGTATCATTGCA 749
Query 364 GCTGAATCAGACTT-CTATTTGCGCAGA-TTATGGGGGTTACC-GCAGGAGGAT-TTGAC 419
|||||||||| || ||| || |||||| || ||||| ||||| | |||||||| || |
Sbjct 750 CCTGAATCAGA-TTACTACTTACGCAGACTT-TGGGGATTACCTG-AGGAGGATGTT--C 804
Query 420 CAGTGAA-CC-AAGATACCTCGCAACGTTTACAGTGGGTATTAATCAGAAAGCAAATATT 477
| ||||| || ||| || ||| ||||||| || ||| || |||||||| || ||
Sbjct 805 CTGTGAAGCCAAAG-TATCTCATTGCGTTTACTGTCGGTTTTGGTCAGAAAGTGAACGTT 863
Query 478 GATGCTTGTGTCAAGAAGTTTTCAGAAA-ACTTCACTATTGTCCTGTTTCACTATGACGG 536
|||||||||||||||||||||||| ||| | || || ||||| || || ||||| |||||
Sbjct 864 GATGCTTGTGTCAAGAAGTTTTCA-AAAGATTTTACAATTGTTCTATTCCACTACGACGG 922
Query 537 TC-AAGTAACCGAGTGGGATGAGTTTGAATGGTCGAAGAC-TGCTATACACATTAGCGTG 594
| || || || ||||| || || |||||||| || || || |||||| | ||||||
Sbjct 923 ACGAA-CCACAGAATGGGAAGAATTAGAATGGTCCAA-ACGCGCAATACACGTGAGCGTG 980
Query 595 CGAAAGCAGACAAAATGGTGGTATGC-AAAGAGGTTTTTGCACCCTGATATTGTAGCACG 653
| |||||| || |||||||||||||| ||| |||||| |||| ||||| ||||| ||||
Sbjct 981 CCAAAGCAAACCAAATGGTGGTATGCTAAA-AGGTTTCTGCATCCTGACATTGTGGCACC 1039
Query 654 ATATGATTATATCTTCATCTGGGATGAAGACCTTGGGGTCGAGCATTTTAATGCAGAAGA 713
||||| ||| | |||||||||||||||||||| || | || | || ||| ||||||
Sbjct 1040 TTATGACTATGTATTCATCTGGGATGAAGACCTCGGCCTTGAAAACTTCGATGTAGAAGA 1099
Query 714 GTACATAAAGATGGTGAAGAAGCATGGCCTGGAGATTTCCCAACCTGGCT-TGGA-ACCA 771
|||||| | | | | ||||| || || || ||||| || || ||| ||| | || | |
Sbjct 1100 GTACATCAGGCTTATAAAGAAACACGGTCTAGAGATATCGCAGCCT-GCTGTTGAGTCTA 1158
Query 772 A-ACCAGGGATTAACGTGGCAGATGACAAAGAG-ACGAGGAGATATG-GAAGTCCAC-AA 827
| | | || | || ||| |||| |||||||| | | | | | | ||||| ||| ||
Sbjct 1159 AGA-AAAAGA-TCACATGGGAGATAACAAAGAGAAAAACCA-A-AGGAGAAGTTCACAAA 1214
Query 828 GATAACAGAA-GA-AAGACCTGGAT-GGTGCTCA-GATCCTCATC-TCCCTCCATGTGCT 882
||| | ||| || || ||| || | | ||| | || ||||| | | ||||| |||||
Sbjct 1215 GAT-GC-GAAGGAGAA-ACCAGG-TCGATGC-AATGACCCTCA-CTTGCCTCCCTGTGCA 1268
Query 883 GCATTCGTTGAGATCATGGCTCCTGTATTTTCAAGAAACGCTTGGCGATGCGTGTGGCAC 942
|| || | ||||| |||||||| ||||| |||||| | || ||||| |||||||||||
Sbjct 1269 GCGTTTATAGAGATTATGGCTCCAGTATTCTCAAGAGATGCATGGCGTTGCGTGTGGCAT 1328
Query 943 GTGATCCAGAATGATTTGGTTCACGGTTGGGGCCTTGACTTT-GCACTCAG-AAGATGTG 1000
|||| ||||| |||||||||||||||||||| ||||| ||| |||||| | || ||| |
Sbjct 1329 ATGATTCAGAACGATTTGGTTCACGGTTGGGGTCTTGA-TTTCGCACTCCGTAA-ATGCG 1386
Query 1001 TTGAGCCTGCACATGAGAAGATAGGAGTAGTAGATTCTCAGTGGGTCGTTCATCAATCTT 1060
|||||||||||||||||||||||||||| || |||||||| ||| || | |||||||||
Sbjct 1387 TTGAGCCTGCACATGAGAAGATAGGAGTTGTGGATTCTCAATGGATCATACATCAATCTC 1446
Query 1061 TTCCTTCCCTT-GGCAACCAAGGTGAGGCA-ACGGACGGGAAAGC-GCCATGGCAAGGGG 1117
||||||| || |||| ||| || |||||| | | |||| ||||| | ||||||||||
Sbjct 1447 TTCCTTCT-TTAGGCAGCCAGGGAGAGGCACAAG-ACGGTAAAGCAGGG-TGGCAAGGGG 1503
Query 1118 TAAGGGATAGATGCAAAAAGGAATGGACAATGTTCCAGAGTAGAATGGCTAACGCGGAGA 1177
| || || ||||| ||| |||||||||||||||||| || ||||||||| | ||||
Sbjct 1504 TGAGAGACAGATGTAAACGGGAATGGACAATGTTCCAAAGCCGAATGGCTAGTTCCGAGA 1563
Query 1178 AGGATTATTTCAA 1190
|| | ||| ||||
Sbjct 1564 AGCAGTATCTCAA 1576
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61897271985
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5