BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926139
Length=2791
Score E
Sequences producing significant alignments: (Bits) Value
AT1G68560.1 | Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase 1 ... 4473 0.0
AT3G45940.1 | Symbols: | Glycosyl hydrolases family 31 protei... 1044 0.0
> AT1G68560.1 | Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase
1 | chr1:25734182-25738002 REVERSE LENGTH=3106
Length=3106
Score = 4473 bits (2422), Expect = 0.0
Identities = 2672/2794 (96%), Gaps = 11/2794 (0%)
Strand=Plus/Plus
Query 2 AAAGTTTCACTCTATAGCCATGGcttcttcttgttcttcatctctagctttctctctttc 61
||||| |||||||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct 87 AAAGTACCACTCTATAGCCATGGCTTC--C-TCTTCTTCATCTCTAGCTTTCTCTCTTTC 143
Query 62 tctttttctagctttaatcctctgtttctcACCCACCCAATCCTCCAAAACCATCGGCAA 121
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 144 TCTTCTTCTAGCTTTAATCCTCTGTTTCTCACCCACCCAATCCTACAAAACCATCGGCAA 203
Query 122 AGGCTACCGTTTGATCTCCATCGAAGAATCTCCAGATGGTGGCTTCATTGGTTACCTCCA 181
||||||||||||| ||||||||||||||||||| || ||||| ||||||||||| |||||
Sbjct 204 AGGCTACCGTTTGGTCTCCATCGAAGAATCTCCCGACGGTGGTTTCATTGGTTATCTCCA 263
Query 182 AGTCAAACAAAAGAACAAAATCTACGGCTCTGATATCACCACTCTTCGTCTCTTCGTCAA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 264 AGTCAAACAAAAGAACAAAATCTACGGCTCTGATATCACCACTCTTCGTCTCTTCGTCAA 323
Query 242 GCACGAAACAGATTCACGTCTTCGTGTTCACATCACAGACGCGAAACAACAACGATGGGA 301
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 324 GCACGAAACTGATTCACGTCTTCGTGTTCACATCACTGACGCGAAACAACAACGATGGGA 383
Query 302 AGTTCCATACAATCTCCTCCCACGAGAACAACCACCACAAGTCGGAAAAGTCATCGGAAA 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 AGTTCCATACAATCTCCTCCCACGAGAACAACCACCACAAGTCGGAAAAGTCATCGGAAA 443
Query 362 ATCAAGAAAATCTCCAATCACAGTTCAAGAAATCTCCGGATCCGAACTAATCTTCAGTTA 421
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 444 ATCAAGAAAATCTCCAATCACAGTTCAAGAAATCTCCGGATCCGAACTTATCTTCAGTTA 503
Query 422 CACAACAGATCCATTCACTTTCGCCGTAAAACGTAGATCTAACCATGAAACACTCTTCAA 481
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 504 CACAACAGATCCATTCACTTTCGCCGTGAAACGTAGATCTAACCACGAAACACTCTTCAA 563
Query 482 CACCTCAAGCTCATTAGTATTCAAAGATCAATACCTAGAGATCTCAACTTCGTTACCAAA 541
||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 564 CACAACAAGCTCATTAGTGTTCAAAGATCAATACCTAGAGATCTCAACTTCATTACCAAA 623
Query 542 AGAAGCATCACTCTATGGTTTAGGTGAAAACTCACAAGCTAATGGTATCAAACTCGTACC 601
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 624 AGAAGCTTCACTCTATGGTTTAGGTGAAAACTCACAAGCTAATGGTATCAAACTCGTACC 683
Query 602 TAACGAGCCTTATACTCTTTACACTGAAGATGTTTCAGCCATTAATCTTAACACTGATCT 661
||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 684 TAACGAGCCTTATACTCTTTACACTGAAGATGTTTCAGCTATCAATCTTAACACTGACCT 743
Query 662 TTATGGTTCGCATCCGATGTATATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 744 TTATGGTTCGCATCCGATGTATATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA 803
Query 722 TGCTGTG-TTGTTGCTT-AATAGTAATGGTATGGATGTTTTCTATAGAGGTGATTCGTTG 779
|||||| || || || |||||||||||||||||||||||||||||||||||||| |||
Sbjct 804 TGCTGTTCTTCTT--TTGAATAGTAATGGTATGGATGTTTTCTATAGAGGTGATTCTTTG 861
Query 780 ACGTATAAAGTTATCGGAGGTGTTTTTGACTTCTATTTCATCGCCGGACCTTCGCCGTTA 839
|||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct 862 ACGTATAAAGTTATCGGAGGTGTTTTCGATTTCTATTTCATCGCCGGACCGTCGCCGTTA 921
Query 840 AATGTTGTTGATCAGTATACTCAGTTAATCGGAAGGCCTGCTCCAATGCCGTACTGGTCT 899
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 922 AATGTTGTTGATCAGTATACTCAGTTAATCGGAAGACCTGCTCCTATGCCGTACTGGTCT 981
Query 900 TTAGGATTTCATCAATGTAGATGGGGATATCATAATTTATCAGTTGTTGAAGATGTGGTG 959
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 982 TTAGGATTTCATCAATGTAGATGGGGATACCATAATCTATCAGTTGTTGAAGATGTGGTG 1041
Query 960 GATAATTACAAAAAGGCTAAGATTCCTCTTGATGTGATTTGGAACGATGATGATCACATG 1019
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1042 GATAATTACAAAAAGGCTAAGATCCCACTTGATGTGATTTGGAACGATGATGATCACATG 1101
Query 1020 GATGGTCACAAAGATTTCACTTTGAATCCAGTGGCTTATCCTCGTGCTAAGCTATTGGCG 1079
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1102 GATGGTCACAAAGATTTCACGTTGAATCCTGTGGCTTATCCTCGTGCTAAGCTATTGGCG 1161
Query 1080 TTCTTGGACAAAATCCACAAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATT 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162 TTCTTGGACAAAATCCACAAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATT 1221
Query 1140 GGTGTCAACGCTAGCTACGGTACATATCAAAGAGCCATGGCCGCTGATGTGTTTATTAAG 1199
||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||
Sbjct 1222 GGTGTCAACGCTAGCTACGGTACATTTCAGAGAGCCATGGCTGCTGATGTGTTTATTAAG 1281
Query 1200 TATGAAGGAAAGCCTTTCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTC 1259
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1282 TATGAAGGAAAGCCATTCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTC 1341
Query 1260 CTTAACCCGAAGACGGTTTCTTGGTGGGGAGATGAAATCAAACGCTTCCATGATTTAGTC 1319
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1342 CTTAACCCGAAGACGGTTTCTTGGTGGGGTGATGAAATCAAACGGTTCCATGATTTAGTC 1401
Query 1320 CCTATTGATGGTCTATGGATTGACATGAACGAGGTGTCGAACTTTTGCTCTGGTTTGTGC 1379
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1402 CCTATTGATGGTTTATGGATTGACATGAACGAGGTGTCGAACTTTTGTTCTGGTTTATGC 1461
Query 1380 ACAATCCCACAGGGGAAGCAATGTCCGAGTGGGGAAGGACCTGGTTGGGTTTGTTGCTTG 1439
|||||||| | || ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct 1462 ACAATCCCTGAAGGAAAGCAGTGTCCAAGTGGGGAAGGTCCTGGTTGGGTTTGTTGCTTG 1521
Query 1440 GACTGCAAGAATATTACCAAGACTAGATGGGATGATCCTCCTTACAAGATTAATGCTACT 1499
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1522 GACTGCAAGAATATAACCAAGACTAGATGGGATGATCCTCCTTACAAGATTAATGCTACT 1581
Query 1500 GGAGTCGTAGCTCCTGTTGGGTTCAAGACTATTGCCACAAGTGCTACACATTACAATGGT 1559
|| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1582 GGTGTCGTAGCTCCTGTTGGGTTCAAGACTATTGCTACAAGTGCTACTCATTACAATGGT 1641
Query 1560 GTTCGAGAGTATGATGCTCACAGTATCTACGGGTTCTCTGAGACCATCGCGACTCACAAG 1619
||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 1642 GTTCGAGAGTACGATGCTCACAGTATCTACGGATTCTCTGAGACCATCGCAACTCACAAG 1701
Query 1620 GGCTTACTTGATGTCAAAGGCAAACGTCCCTTCATTTTATCCCGGTCTACTTTCGTGGGT 1679
||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1702 GGCTTACTTAATGTCCAAGGCAAACGTCCCTTCATTTTATCCCGGTCTACTTTCGTTGGT 1761
Query 1680 TCGGGTAAATATGCCGCTCACTGGACTGGAGATAATCAAGGAACATGGCAGAGCTTGCAA 1739
|||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1762 TCGGGTCAATATGCGGCTCACTGGACCGGAGATAACCAAGGAACATGGCAGAGCTTGCAA 1821
Query 1740 GTGTCTATCTCAACCATGTTGAATTTTGGTATCTTTGGAGTTCCCATGGTTGGTTCAGAC 1799
|||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||
Sbjct 1822 GTGTCTATCTCAACTATGTTGAACTTCGGTATATTTGGAGTTCCCATGGTTGGTTCAGAC 1881
Query 1800 ATTTGTGGATTCTACCCTCAACCAACAGAAGAACTCTGCAACCGTTGGATCGAAGTTGGC 1859
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1882 ATTTGTGGATTCTACCCACAACCAACAGAAGAACTCTGCAACCGTTGGATCGAAGTAGGC 1941
Query 1860 GCGTTTTACCCGTTTTCAAGAGATCACGCCAATTACTACTCACCAAGACAAGAGCTTTAC 1919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1942 GCGTTTTACCCGTTTTCAAGAGATCACGCCAATTACTACTCACCAAGACAAGAGCTTTAC 2001
Query 1920 CAATGGGACACAGTTGCAGACTCAGCTCGTAACGCTCTTGGTATGAGATATAAAATCCTT 1979
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 2002 CAATGGGACACAGTTGCAGACTCAGCTCGTAACGCTCTTGGTATGAGATACAAGATCCTT 2061
Query 1980 CCTTTCCTCTACACTCTCAACTACGAAGCCCATATGACCGGTGCACCCATCGCTAGACCG 2039
||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct 2062 CCTTTCCTCTACACTCTTAACTACGAAGCGCATATGACTGGTGCACCCATCGCTAGACCG 2121
Query 2040 CTCTTCTTCTCATTCCCTGAATACACCGAATGTTACGGCAACAGCAGACAGTTCTTGCTT 2099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2122 CTCTTCTTCTCATTCCCTGAATACACCGAATGTTACGGCAACAGCAGACAGTTCTTGCTT 2181
Query 2100 GGAAGCAGCTTAATGATATCTCCCGTTCTTGAAAAAGGCAAAACCGAAGTAGAAGCATTG 2159
||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct 2182 GGAAGCAGCTTCATGATATCTCCGGTTCTCGAGCAAGGCAAAACCGAAGTAGAAGCATTG 2241
Query 2160 TTCCCACCAGGTTCTTGGTACCACATGTTCGACATGACTCAAGCCA-TAGTGTCCAAGAA 2218
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 2242 TTCCCACCAGGTTCTTGGTACCACATGTTCGACATGACTCAAGC-AGTAGTGTCCAAGAA 2300
Query 2219 TGGGAAGCGCGTAACTCTCTCAGCTCCTTTGAACTTTGTGAACGTTCACCTTTACCAAAA 2278
||||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 2301 CGGGAAACGTGTAACTCTCCCAGCTCCTTTGAACTTTGTGAACGTTCATCTTTACCAAAA 2360
Query 2279 CACTATATTACCAATGCAACAAGGCGGGTTAATTTCCAAAGACGCGAGAACCACACCGTT 2338
|||||| ||||||| ||||||||||||||| |||||||| ||||| ||||| ||||||||
Sbjct 2361 CACTATCTTACCAACGCAACAAGGCGGGTTGATTTCCAAGGACGCAAGAACAACACCGTT 2420
Query 2339 TAGCCTCGTCATTACTTTCCCTGCTGGAGCTTCTGAGGGTTACGCCACCGGGAAACTCTA 2398
||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 2421 TAGCCTCGTCATTGCTTTCCCTGCAGGAGCTTCTGAAGGTTACGCCACCGGGAAACTCTA 2480
Query 2399 TCTAGACGAAGACGAGCTCCCCGAAATGAAGCTAGGAAATGGACAGTCCACGTACGTTGA 2458
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 2481 TCTAGACGAAGACGAGCTTCCGGAAATGAAGCTAGGAAATGGACAGTCCACGTACGTTGA 2540
Query 2459 CTTCTACGCTTCGGTTGGAAACGGGACTGTGAAGATGTGGTCACAAGTTAAAGAAGGTAA 2518
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2541 CTTCTACGCTTCGGTCGGAAACGGGACAATGAAGATGTGGTCACAAGTTAAAGAAGGTAA 2600
Query 2519 GTTTGCATTGAGCAAAGGATGGGTGATTGAGAAAGTGAGTGTTTTGGGACTTAAAGGAAC 2578
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 2601 GTTTGCATTGAGCAAAGGATGGGTGATTGAGAAAGTGAGTGTTTTGGGACTTAGAGGAGC 2660
Query 2579 AGGACAAGCT-TCTGAGATTCAAATCAATGGCAGTCCAATGACAAAGAAGATTGAGGTAA 2637
|||||||| | |||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 2661 AGGACAAG-TGTCTGAGATTCAAATCAATGGAAGTCCAATGACAAAGAAGATTGAGGTTA 2719
Query 2638 GCTCGAAGGAACATACATATGTGATTGGTTTGGAAGATGAAGAAGAGAACAAGAGTGTGA 2697
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2720 GCTCGAAGGAGCATACCTATGTGATTGGTTTGGAAGATGAAGAAGAGAACAAGAGTGTGA 2779
Query 2698 TGGTTGAGGTTAGAGGTCTTGAGATGCTTGTTGGTAAGGACTTTAACATGTCCTGGAAAA 2757
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 2780 TGGTTGAGGTTAGAGGACTTGAGATGCTTGTTGGAAAGGATTTTAACATGTCCTGGAAAA 2839
Query 2758 TGGGTATCAATTAATTTACATGTGAGAGTTGGTA 2791
||||||||||||||||||||||||||||||||||
Sbjct 2840 TGGGTATCAATTAATTTACATGTGAGAGTTGGTA 2873
> AT3G45940.1 | Symbols: | Glycosyl hydrolases family 31 protein
| chr3:16886226-16889171 REVERSE LENGTH=2607
Length=2607
Score = 1044 bits (565), Expect = 0.0
Identities = 1101/1347 (82%), Gaps = 88/1347 (7%)
Strand=Plus/Plus
Query 56 tctttctctttttctagct-ttaatcctctgtttctcACCCAC-CCAATCCTCCAAAACC 113
|||||||||| || | ||| || |||||||| |||||| | | ||| | ||||| ||
Sbjct 12 TCTTTCTCTTCTTGTTGCTATT-ATCCTCTGCTTCTCA-TCTCTCCAGTGTTCCAACGCC 69
Query 114 ATCGGCAAAGGCTACCGTTTGATCTCCATCGAAGAA-TCT-CC-A-GATGGTGGCTTCAT 169
|||||||||||||||||| |||||||||| | |||| ||| || | ||||| |||||||
Sbjct 70 ATCGGCAAAGGCTACCGTCTGATCTCCAT-GGAGAAGTCTCCCGATGATGGCAGCTTCAT 128
Query 170 TGGTTACCTCCAAGTCAAACAAAAG-AACAAAATCTACGGCTCTGATATCACCACT-CTT 227
||| || |||||||| || | | || ||||||||||||||||||||||| |||| | |||
Sbjct 129 TGGCTATCTCCAAGTGAAGC-AGAGTAACAAAATCTACGGCTCTGATATAACCA-TCCTT 186
Query 228 CGTCTCTTCGTCAAGC-ACGA-AACAGATTCA-CGTCTTCGTGTTCACATCACAGACGCG 284
|| |||||| |||| | || | ||| || ||| || ||||| |||||||| ||||||||
Sbjct 187 CGACTCTTCATCAA-CTAC-AGAACGGA-TCATCGCCTTCGCGTTCACATTACAGACGC- 242
Query 285 AAA-CAACAACGATGGGAAGTTCCATACAATCTCCTCC-CACGAGAACAACCACCACAAG 342
||| ||||||||||||||||||| ||||||||||||| | || |||| | |||||
Sbjct 243 AAAGAAACAACGATGGGAAGTTCCGTACAATCTCCTCCGC-CGGGAAC-A--ACCAC--- 295
Query 343 TCGGAAAAGTCATCGGAAAATCAAGAAAATCTCCAATCACAGTTCAAGAAATCTCCGGAT 402
| | || || ||||||||||||||||||||||| | || || |||||||| ||||||
Sbjct 296 -C-G-AATGTAATCGGAAAATCAAGAAAATCTCCGGTTACGGTACAAGAAATATCCGGA- 351
Query 403 CC-GAACTAATCTTCAGT-TACACAACAGATCCATTCA-CTTTCGCCGTAA-AACGTAGA 458
|| || || || || | | | ||| |||||| |||| | |||||||||| || | |||
Sbjct 352 CCGGAGCTGAT-TTTAATCTTCACCGTAGATCCTTTCAGC-TTCGCCGTAAGAA-GAAGA 408
Query 459 TCTAACCATGAAAC-ACTCTTCAACACCTCA--AGCT-C-ATTAGT-ATTC--A-A-A-- 506
|| ||| || || | | ||||||| || | |||| | || ||| |||| | | |
Sbjct 409 TCCAACGGCGAGACGA-TTTTCAACA-CT-AGTAGCTCCGATGAGTCATTCGGAGAGATG 465
Query 507 --GATC----A--A-TACCTAGAGATCTCAACTTCGTTACCAAAAGAAGCATCACTCTAT 557
| || | | ||||| |||||||||||||| ||||| ||||| || || || ||
Sbjct 466 GTGTTCAAGGACCAGTACCTCGAGATCTCAACTTCTTTACCTAAAGACGCGTCTCTATAC 525
Query 558 GG-TTTAGGTGAAAACTCACAAGCTAATGGTATCAAACTCGTACCTAACGAGCCTTATAC 616
|| ||| ||||||||||| ||||| ||||| |||||||| || ||||| ||||| || ||
Sbjct 526 GGATTT-GGTGAAAACTCTCAAGCCAATGGAATCAAACTGGTTCCTAATGAGCCATACAC 584
Query 617 TCT-TTACACTGAAGATGTTTCAGCCATTAATCTTAACACTGATCTTTATGGTTCGCATC 675
||| || ||||||||| || || || ||||||| |||||||||||||| || |||||||
Sbjct 585 TCTCTT-CACTGAAGACGTCTCGGCGTTTAATCTCAACACTGATCTTTACGGGTCGCATC 643
Query 676 CGATGTATATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA-TGCTGTGT-TG-T 732
|| | || |||||| | ||||||||| | |||||||| ||||| || | |||| | || |
Sbjct 644 CGGTTTACATGGATTTGAGAAACGTTAGTGGTAAAGCCTATGCACACT-CTGT-TCTGCT 701
Query 733 TGCTTAATAGTAATGGTATGGATGT-TTTCTATAGAGGTGATTCGTTGACGTATAAAGTT 791
| ||||| ||| ||||||||||||| ||| || ||||| ||||| |||||||| || ||
Sbjct 702 T-CTTAACAGTCATGGTATGGATGTGTTT-TACAGAGGCGATTCCTTGACGTACAAGGTA 759
Query 792 ATCGGAGGTGTTTTTGACTTCTATTTCATCGCCGGACCTTCGCCGT-TAAATGTTGTTGA 850
|| |||||||||||||| ||||||||| |||| ||||| ||||| | | ||||| |||||
Sbjct 760 ATTGGAGGTGTTTTTGATTTCTATTTCTTCGCTGGACCGTCGCC-TCTTAATGTCGTTGA 818
Query 851 TCAGTATAC-TCAGTTAATCGGAAGGCCTGCTCCAATGCCGTACTGGTCTTTAGGATTTC 909
||| || || || |||||| ||| |||| || |||||||||||||||||| |||| ||||
Sbjct 819 TCAATACACTTC-GTTAATAGGACGGCCAGCGCCAATGCCGTACTGGTCTCTAGGGTTTC 877
Query 910 ATCAATGTAGATGGGGATATCATAATTTATCAGTTGTTGAAGATGTGGTGGATAATTACA 969
| |||||||||||||| || | |||| ||||||||||| ||||||||||||||||||||
Sbjct 878 ACCAATGTAGATGGGGGTACCGTAATGTATCAGTTGTTAAAGATGTGGTGGATAATTACC 937
Query 970 AAAAGGCTAAGATTCCTCTTGATGTGATTTGGAACGATGATGATCACATGGATGGTCACA 1029
||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| |||
Sbjct 938 AAAAGGCTAAGATCCCTCTTGATGTGATTTGGAACGATGCTGATTACATGGATGGTTACA 997
Query 1030 AAGATTTCACTTTGAATCCAGTGGCTTATCCTCGTGCTAAGCTATTGGCG-TTCTTGGAC 1088
| || ||||||||| ||| ||| || ||||| |||||||||||| | | ||||||||
Sbjct 998 AGGACTTCACTTTGGATCTTGTGAATTTTCCTCATGCTAAGCTATT-GAGTTTCTTGGAT 1056
Query 1089 AAAATCCACAAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATTGGTGTCAAC 1148
| |||||| ||||| |||||||||||| ||||||| || |||||||||||||||||||||
Sbjct 1057 AGAATCCATAAGATGGGAATGAAGTATGTTGTGATAAAAGATCCTGGTATTGGTGTCAAC 1116
Query 1149 GCTAGCTACGGTACATATCAAAGAGCCATGGC-CGCTGATGTGTTTATTAAGTATGAAGG 1207
|| || |||||| ||| ||||||| |||||| | ||||||||| ||||| ||||||||
Sbjct 1117 GCGAGTTACGGTGTATACCAAAGAGGCATGGCTAG-TGATGTGTTCATTAAATATGAAGG 1175
Query 1208 AAAGCCTTTCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTTAACCC 1267
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1176 AAAGCCTTTCTTGGCTCAAGTGTGGCCTGGTCCAGTTTACTTCCCTGATTTCCTTAACCC 1235
Query 1268 GAAGACGGTTTCTTGGTGGGGAGATGAAAT-CAAACGCTTCCATGATTTAGT-CCCTATT 1325
||| ||||||||||||||||| |||||||| | | || |||||||| ||||| ||| |||
Sbjct 1236 GAAAACGGTTTCTTGGTGGGGCGATGAAATTCGA-CGTTTCCATGAGTTAGTACCC-ATT 1293
Query 1326 GATGGTCTATGGATTGACATGAACGAG 1352
|||||||| ||||| |||||||| |||
Sbjct 1294 GATGGTCTTTGGATCGACATGAATGAG 1320
Score = 893 bits (483), Expect = 0.0
Identities = 709/820 (86%), Gaps = 8/820 (1%)
Strand=Plus/Plus
Query 1486 AGATTAATGCTACTGGAGTCGTAGCTCCTGTTGGGTTCAAGACTATTGCCACAAGTGC-T 1544
|||| |||||||||||| | |||| || | ||||||||||||||| |||||||||| |
Sbjct 1319 AGATCAATGCTACTGGACACAAAGCTTCTCTAGGGTTCAAGACTATTCCCACAAGTGCTT 1378
Query 1545 ACACATTACAATGGTGTTCGAGAGTATGATGCTCACAGTATCTACGGGTTCTCTGAGACC 1604
| || |||||||||||||| ||||| || |||||||| |||||||||||||||||| ||
Sbjct 1379 A-TCACTACAATGGTGTTCGTGAGTACGACGCTCACAGCATCTACGGGTTCTCTGAGGCC 1437
Query 1605 ATCGCGACTCACAAGGGCTTACTTGATGTCAAAGGCAAACGTCCCTTCATTTTATCCCGG 1664
|| ||||| ||||||| ||| |||| |||| ||||||||||||| || || || || |||
Sbjct 1438 ATAGCGACCCACAAGGCCTTGCTTGCTGTCCAAGGCAAACGTCCATTTATATTGTCACGG 1497
Query 1665 TCTACTTTCGTGGGTTCGGGTAAATATGCCGCTCACTGGACTGGAGATAATCAAGGAACA 1724
|| ||||| || ||||| ||| ||||||| |||||||||||||||||||| |||||||||
Sbjct 1498 TCCACTTTTGTTGGTTCAGGTCAATATGCTGCTCACTGGACTGGAGATAACCAAGGAACA 1557
Query 1725 TGGCAGAGCTTGCAAGTGTCTATCTCAACCATGTTGAATTTTGGTATCTTTGGAGTTCCC 1784
||||||||||||||||| ||||||||||| |||||||||||||| || |||||||||||
Sbjct 1558 TGGCAGAGCTTGCAAGTATCTATCTCAACGATGTTGAATTTTGGAATTTTTGGAGTTCCT 1617
Query 1785 ATGGTTGGTTCAGACATTTGTGGATTCTACCCT-CAACCAACAGAAGAACTCTGCAACCG 1843
|||||||||||||| || |||||||||| ||| ||| || |||||||||||||||||||
Sbjct 1618 ATGGTTGGTTCAGATATATGTGGATTCTTTCCTCCAA-CACCAGAAGAACTCTGCAACCG 1676
Query 1844 TTGGATCGAAGTTGGCGCGTTTTACCCGTTTTCAAGAGATCACGCCAATTACTACTCACC 1903
|||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| | ||
Sbjct 1677 TTGGATTGAAGTTGGTGCGTTTTACCCCTTTTCAAGAGATCACGCTGATTACTACGCTCC 1736
Query 1904 AAGACAAGAGCTTTACCAAT-GGGACACAGTTGCAGACTCAGCTCGTAACGCTCTTGGTA 1962
|||| ||||||||||||||| |||| ||||| ||||| |||||||||||||||||||| |
Sbjct 1737 AAGAAAAGAGCTTTACCAATGGGGA-ACAGTAGCAGAGTCAGCTCGTAACGCTCTTGGGA 1795
Query 1963 TGAGATATAAAATCCTTCCTTTCCTCTACACTCTCAACTACGAAGCCCATATGACCGGTG 2022
||||||| ||| |||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 1796 TGAGATACAAACTCCTTCCTTTTCTCTACACTCTCAACTACGAAGCCCATATGAGTGGTG 1855
Query 2023 CACCCATCGCTAGACCGCTCTTCTTCTCATTCCCTGAATACACCGAATGTTACGGCAACA 2082
|||| ||||||||||||||||||||||| |||||||| | ||| ||||| ||||| |
Sbjct 1856 CACCAATCGCTAGACCGCTCTTCTTCTCTTTCCCTGAGTTCACTGAATGCTACGGTTTGA 1915
Query 2083 GCAGACAGTTCTTGCTTGGAAGCAGCTTAATGATATCTCCCGTTCTTGAAAAAGGCAAAA 2142
||| |||||||||||| |||||||||||||||||||| || ||||||||| |||| ||||
Sbjct 1916 GCAAACAGTTCTTGCTCGGAAGCAGCTTAATGATATCGCCGGTTCTTGAACAAGGTAAAA 1975
Query 2143 CCGAAGTAGAAGCATTGTTCCCACCAGGTTCTTGGTACCACATGTTCGACATGACTCAAG 2202
|| |||| |||||| ||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 1976 CCCAAGTTGAAGCACTGTTCCCACCAGGTTCTTGGTACCACATGTTTGACATGACTCAGG 2035
Query 2203 CCATAGTGTCCAAGAATGGGAAGCGCGTAACTCTCTCAGCTCC-TTTGAACTTTGTGAAC 2261
| | || || ||||| |||| || | || ||| | ||||| ||| ||| ||||||||
Sbjct 2036 TCGTTGTTTCAAAGAACGGGAGGCTTTTCACCCTCCCCGCTCCGTTT-AACGTTGTGAAC 2094
Query 2262 GTTCACCTTTACCAAAACACTATATTACCAATGCAACAAG 2301
|| || |||||||| ||| | ||| |||| ||||||||||
Sbjct 2095 GTGCATCTTTACCAGAACGCGATACTACCCATGCAACAAG 2134
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 138661430452
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5