BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926144 Length=409 Score E Sequences producing significant alignments: (Bits) Value AT3G06150.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 359 1e-98 AT5G65687.1 | Symbols: | Major facilitator superfamily protein... 126 1e-28 > AT3G06150.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19060.1); Has 61 Blast hits to 59 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:1861797-1864116 REVERSE LENGTH=2188 Length=2188 Score = 359 bits (194), Expect = 1e-98 Identities = 224/238 (94%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 21 ATGCTGGAGAAAGGAATGATTTTGCCTCCGGTACCGAGCCAATTGGTGCTTTTACGGCCA 80 |||| |||||||||||||||||| || ||||||||||||||||||||| ||||||||||| Sbjct 230 ATGCCGGAGAAAGGAATGATTTTCCCGCCGGTACCGAGCCAATTGGTGATTTTACGGCCA 289 Query 81 AACCCT-TTGCTTCAATGGCGGCTTGGTGCTCTTACAGCACTCGTCTTCTTCCTCATGTT 139 | |||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 290 AGCCCTCTT-CTTCAATGGCGGCTTGGTGCTCTTACAGCACTCGTCTGCTTCCTTATGTT 348 Query 140 AGTCGTTTGGAGTATTGACGGTTGTTCGATTCAAAGCTTCGTTGAGCCATGGAGATTCAA 199 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 349 AGTCGTTTGGAGTATTGACGGTTGTTCGATTCAAAGCTTCGTTCAGCCATGGAGATTCAA 408 Query 200 TGCATACTCTGTTCGAATCAGTCCTTCTCCGTCGCC-TTTAATGTCACCGAAACCCAA 256 ||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct 409 TGCTTACTCTGTTCGAATCAGTCCTTCTCCGTCGCCGTTTA-TGTCAACGAAACCCAA 465 > AT5G65687.1 | Symbols: | Major facilitator superfamily protein | chr5:26269856-26272899 REVERSE LENGTH=1773 Length=1773 Score = 126 bits (68), Expect = 1e-28 Identities = 88/96 (92%), Gaps = 7/96 (7%) Strand=Plus/Minus Query 315 AGCTTCTTCTTTAGCCGGAGAATCTCTCTGGCCAACTTTCGTCATTATCTCT-T-T--CG 370 ||||||||||||||||||||||||||||||||||||| |||||||||||||| | | || Sbjct 157 AGCTTCTTCTTTAGCCGGAGAATCTCTCTGGCCAACTCTCGTCATTATCTCTGTCTTTCG 98 Query 371 CTGTCAGATTCAATTTTAACACTCTGTCTTTCTTTA 406 |||||||||||||| ||||||||||||||||||| Sbjct 97 CTGTCAGATTCAAT---AACACTCTGTCTTTCTTTA 65 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19353083365 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5