BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926191 Length=1168 Score E Sequences producing significant alignments: (Bits) Value AT1G68960.1 | Symbols: | Protein of unknown function (DUF295) ... 1602 0.0 > AT1G68960.1 | Symbols: | Protein of unknown function (DUF295) | chr1:25929896-25931257 FORWARD LENGTH=1292 Length=1292 Score = 1602 bits (867), Expect = 0.0 Identities = 1078/1178 (92%), Gaps = 21/1178 (2%) Strand=Plus/Plus Query 2 AAATTAGGGTTTTACAACAATGTCTCAGCTTTTGTTGTGCCGAATCTCAAAGCTCTCATC 61 |||||||||||||| |||||||||||||| | |||||||||||||| ||||| ||| | Sbjct 29 AAATTAGGGTTTTAAAACAATGTCTCAGC---TCTTGTGCCGAATCTCGAAGCTTTCAAC 85 Query 62 AGCCCGGAACCA-TTTCCTCTGTTTCCGACGGTCAAAATTCTCTACGGCCACGGCGGCGG 120 | ||||||| || ||||||||||||||||||| |||||||||||| |||||||| || Sbjct 86 ATCCCGGAA-CAGGATCCTCTGTTTCCGACGGTCCGAATTCTCTACGGTCACGGCGGAGG 144 Query 121 C-A--ACACCTTACCTCCTCCTCGGCGA-CGATGTTGTCGGAATATCTCCTTGCGGTGGA 176 | | |||||||| || ||||||||| | |||| ||||||||| ||||||||||| ||| Sbjct 145 CAACGACACCTTATCTTCTCCTCGGC-AGCGATCTTGTCGGAAAATCTCCTTGCGATGGG 203 Query 177 AAAGTTGTCAACTTTAACCTATACGATCCGAGG-AGACAAGAGCAAGTGAAGATCGAAAA 235 ||||| |||||||||||||| ||||| || ||| || ||||||||||||||||||||||| Sbjct 204 AAAGTCGTCAACTTTAACCTCTACGACCCAAGGAAG-CAAGAGCAAGTGAAGATCGAAAA 262 Query 236 CAAGATTTTATCAAAGGAGGTCTATAAATCTCGTAGGATAGGATCATCAAGAGGATGGTT 295 ||||||| |||||||||| ||||| |||| | | | ||||||| ||| |||||||||| Sbjct 263 CAAGATTCTATCAAAGGAAGTCTACGAATCCCACAAGTTAGGATCCTCACGAGGATGGTT 322 Query 296 AGCTTTGGTGAACAAGAAAGATTCAACAGTGCGTCTCACTAACATCTTAAACCCTTCGAA 355 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 323 AGCTTTGTTGAACAAGAAAGATTCAACAGTGCGTCTCACTAACATCTTAAACCCTTCTAA 382 Query 356 GAAGATCATTTCTTTACCTCCAATAACCAGAGACAAATATGAA-CACCATGTTAATGTCT 414 ||| ||||| ||||||||| || |||||||||||||||||||| | |||||||||||||| Sbjct 383 GAAAATCATATCTTTACCTTCACTAACCAGAGACAAATATGAATC-CCATGTTAATGTCT 441 Query 415 CTGTCTCATCTTCAAATGAAGAAGACTGTGTTGTCGCCGTCAAGTTTTACGGGTCACGAG 474 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 442 CTGTCTCATCTTCAAATGAAGAAGACTGTGTGGTCGCCGTCAAGTTTTACGGGTCACGAG 501 Query 475 TCAGTCTTTGTCGAACTGGTGACTCCGAGTGGACTCGCATCAACGTGCCTTGCCCATCTT 534 | |||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 502 TTAGTCTTTGTCGACCTGGTGACTCCGAGTGGACTCGCATTGACGTGCCTTGTCCATCTT 561 Query 535 TCCATTCTTCTACCGTCATTTACTCGGAGAGAGACCGGAGATTTTACTTGAACAATTGTA 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 562 TCCATTCTTCTACCGTCATTTACTCGGAGAGAGACCGGAGATTTTACTTGAACAATTGTA 621 Query 595 ACCCTGACTACACTGGTCCAACAGATTTCACACCGAAAACCGGTTTTCCCACTCCGGTTA 654 |||||||||| || ||||| || ||||||||||||||| ||||||| | ||||||||||| Sbjct 622 ACCCTGACTATACCGGTCCGACCGATTTCACACCGAAATCCGGTTTACACACTCCGGTTA 681 Query 655 GTGGCTACAAGAGATTCCTCTTCTCTAACTTTCTTGACGAATTACCAGAGTTGAAGAACG 714 ||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||| Sbjct 682 GTGGCTACAAGAGATTCCTCTTCTCTAACTTTCTTGAAGAAATGCCAGAGTTGGAGAACG 741 Query 715 AAATGCGTCTCTCTCGTTTCAGGATCCAACAACAACTAGTCGAGTCAGCTTCGGGCCAAT 774 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 742 AAAGGCGTCTCTCTCGTTTCAGGATCCAACAACAACTAGTCGAGTCAGCTTCGGGCCAAT 801 Query 775 CCTTCATCGTTGCATGGTTTGTGGAGAGAT-TTACGGACAAAGGAGAAGTTGCGACATGG 833 |||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| Sbjct 802 CCTTCATCGTTGCATGGTTTGTTGAGAG-TCTTACGGACAAAGGAGAAGTTGCGACATGG 860 Query 834 GGAGACGCACGTTACA-TAAACAGA-AAAGACCTTTGCAGGAAGACCCACAAGATCATGG 891 |||||| ||||||||| ||| || | ||||||||||||| |||||||||||||||||||| Sbjct 861 GGAGACACACGTTACAATAA-CA-ACAAAGACCTTTGCAAGAAGACCCACAAGATCATGG 918 Query 892 TGTTTCGGCAAGACGAAGAGCAAGGGATTGGTCCTTATACCGATGACATTGGCGATCTCT 951 || || ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 919 TGATTAGGCAAGACGAAGAGCAAGGGATTGGTCCTTACACCGATGACATTGGCGATCTCT 978 Query 952 GCATTTTCTTGGGCGAGAATGAATCTTTCTGTCTCTCTGCCAAGGACTTCCCTGGTCTTA 1011 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 979 GCATTTTCTTGGGCGAGAATGAATCTTTCTGTCTCTCTGCTAAGGACTTCCCTGGTCTTA 1038 Query 1012 ACCCTAACTCTGTCTACTTTGCTGGACATAGTTCCGGTTTTGGCATATGTGATCTCGCCT 1071 |||||||||| ||||||||||| || ||| ||||||||| ||||||||| |||||||||| Sbjct 1039 ACCCTAACTCAGTCTACTTTGCCGGCCATGGTTCCGGTTATGGCATATGGGATCTCGCCT 1098 Query 1072 CTCGCACCATACGTTATCTCTCCGACTCTACTCCACCACCCGGTCGCATGTTTTGGCTTC 1131 || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1099 CTTGCACCATTCGTTATCTCTCTGACTCTACTCCACCACCCGGTCGCATGTTTTGGCTTC 1158 Query 1132 CTCCCACAATGTGCTAATAAGAGAGAAGGTTT-TTGTC 1168 |||||||||| | | |||| |||||||| | | ||||| Sbjct 1159 CTCCCACAATATCCCAATAGGAGAGAAGATATCTTGTC 1196 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57329022390 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5