BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926223 Length=726 Score E Sequences producing significant alignments: (Bits) Value AT1G69295.1 | Symbols: PDCB4 | plasmodesmata callose-binding pr... 933 0.0 > AT1G69295.1 | Symbols: PDCB4 | plasmodesmata callose-binding protein 4 | chr1:26050197-26052567 REVERSE LENGTH=1688 Length=1688 Score = 933 bits (505), Expect = 0.0 Identities = 659/730 (90%), Gaps = 24/730 (3%) Strand=Plus/Plus Query 1 TCTCTCTGAACT-ACACAATCATGTCGGTTTTACTTCCTCTCTGTCTGATTATCTCCATG 59 ||||| |||| | || || ||||||||||||||||||||||||||||||||||||||||| Sbjct 705 TCTCTTTGAA-TCACTCAGTCATGTCGGTTTTACTTCCTCTCTGTCTGATTATCTCCATG 763 Query 60 TTCACATACTCAAACGCAGTGTATTGTGTGTGCAAAGATGGGAACGAGCAAGTTCTTCAG 119 ||||| || |||||||||| ||||||| | |||||||| |||||||||||||| |||||| Sbjct 764 TTCACCTATTCAAACGCAGCGTATTGTCTTTGCAAAGAGGGGAACGAGCAAGTGCTTCAG 823 Query 120 AAGGCAATAGACTACGCTTGTGGAAACGGAGCTGACTGTAGTCAGATCCAGAC--ATCCG 177 |||||||||||||||||||||||||| ||||||||||||| |||||||| || | ||| Sbjct 824 AAGGCAATAGACTACGCTTGTGGAAATGGAGCTGACTGTACCCAGATCCA-ACCCA-CCG 881 Query 178 GAGCTTGTTTCCAACCTAACACCGTCAAAAGCCACTGTGACGTCGCCGTCAACAGTTACT 237 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 882 GAGCTTGTTACCAACCTAACACCGTCAAAAACCACTGTGACGTCGCCGTCAACAGTTACT 941 Query 238 ACCAGAAGAAAGCTTCTTCCGGTGCCACCTGTGACTTTAACGGCGCCGCCACCCCCTCTA 297 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 942 ACCAGAAAAAAGCTTCTTCCGGTGCCACCTGTGACTTTAACGGCGCCGCCTCCCCCTCTA 1001 Query 298 ATACCCTTCCTTCAACTGCTTCAAGCTGTTTAACTGGTTCAAGCTCTAGTGGCACTCCTA 357 ||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1002 CTACCCCTCCGTCAACTGCTTCAAACTGTTTAACTGGTTCAAGCTCTAGTGGCACTCCTA 1061 Query 358 CCACAGGAACCCCAACTAGTGGGACCCCAACTACCGGAACTCCAACCACTGGAACCCCCA 417 |||||||||| ||||||| |||||| | | | ||| | | ||| ||||| | Sbjct 1062 CCACAGGAACACCAACTACTGGGAC---A-C--C---AAC-C-AG----TGGGACCCCGA 1106 Query 418 CCACCGGAACTCCGACTACTGGGACCCCCACCACCGGAACTCCGACAAGTGGGACCCCAA 477 | |||||||||||||| || || ||||||||||| |||||||| || |||||||| |||| Sbjct 1107 CTACCGGAACTCCGACCACCGGAACCCCCACCACTGGAACTCCAACCAGTGGGACTCCAA 1166 Query 478 CTAGTGGCTTCCCAACTACCGGGACTCCGAACACAGGGACTAACACTGGGATGCCAAATT 537 ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1167 CTAGTGGCTTCCCAAATACCGGGACTCCAAACACAGGGACTAACACTGGGATGCCAAATT 1226 Query 538 CCGGCGGGATGCCAACTTCATCGTCATCTTCGGTGTTCCCGGGCACTACTCTTGGACCGA 597 || ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 1227 CCAACGGGATGCCAACTTCATCGTCATCTTCGGTGTTCCCGGGGACTACTCTTGGCCCGA 1286 Query 598 CTGGTAGCGGGGGACTAGGTGATCCAAATGCTGGAGAGAAGCTGTCTGTCCGAACTAACA 657 |||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 1287 CTGGGAGCGGGGGACTAGGCGATCCAAATGCTGGAGAGAAGCTGTCTGTTCGAACTAACA 1346 Query 658 CGGTGGTCTTCTTATTATCCGGTGTAGCT--A-TGCTTGTCATATGAGGGCTTAGAAGTC 714 | ||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct 1347 CAGTGGTCTTCTTATTAACCGGTGTAGCAGCAATGCTTGTCATATGAGGGCTTAGAAGTC 1406 Query 715 ACACGAGGTT 724 ||||| |||| Sbjct 1407 ACACGCGGTT 1416 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35214137047 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5