BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926386
Length=1490
Score E
Sequences producing significant alignments: (Bits) Value
AT1G70580.1 | Symbols: AOAT2, GGT2 | alanine-2-oxoglutarate ami... 2464 0.0
AT1G23310.1 | Symbols: GGT1, AOAT1, GGAT1 | glutamate:glyoxylat... 1679 0.0
> AT1G70580.1 | Symbols: AOAT2, GGT2 | alanine-2-oxoglutarate aminotransferase
2 | chr1:26612719-26616069 FORWARD LENGTH=1795
Length=1795
Score = 2464 bits (1334), Expect = 0.0
Identities = 1441/1492 (97%), Gaps = 10/1492 (1%)
Strand=Plus/Plus
Query 2 TTGAAAAGTAAATCCTGGAAATGTCTCTCAAGGCATTAGACTACGAGTCGC-TGAATGAA 60
|||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||
Sbjct 106 TTGAAAAGTAAATCCTGGAAATGTCTCTCAAGGCGTTAGACTACGAGTC-CTTGAATGAA 164
Query 61 AACGTCAAGAATTGTCAGTATGCAGTCAGAGGTGAACTTTATCTCCGTGCTTCTGAGCTT 120
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 165 AACGTGAAGAATTGTCAGTATGCAGTCAGAGGTGAACTTTATCTTCGTGCTTCTGAGCTT 224
Query 121 CAGAAAGAAGGCAAAAAGATTATTTTCACAAATGTTGGAAACCCTCATGCTTTAGGACA- 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 225 CAGAAAGAAGGCAAAAAGATTATTTTCACAAATGTTGGAAACCCTCATGCTTTAGGACAG 284
Query 180 AAAGCCTCTGACTTTTCCTCGTCAGGTGGTTGCTTTATGCCAAGCACCATTTCTGCTAGA 239
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 285 AAA-CCTCTGACTTTTCCTCGTCAGGTGGTTTCTTTATGCCAAGCACCATTTCTGTTAGA 343
Query 240 TGATCCAAATATTGGTATGATATTCCCAGCAGATGCTATTGCAAGAGCTAAGCATTATCT 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 344 TGATCCAAATGTTGGTATGATATTCCCAGCAGATGCTATTGCAAGAGCTAAGCATTATCT 403
Query 300 TTCTTTGACTTCTGGTGGTCTTGGTGCTTACAGTGACTCAAGAGGCCTTCCGGGAGTTCG 359
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 404 TTCCTTGACTTCTGGTGGTCTTGGTGCTTACAGTGACTCAAGAGGTCTTCCGGGAGTTCG 463
Query 360 GAAAGAAGTTGCTGAGTTCATTGAACGGCGTGATGGATATCCAAGCGACCCAGAACTCAT 419
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 464 GAAAGAAGTCGCTGAGTTCATTGAACGGCGTGATGGATATCCAAGCGATCCAGAACTCAT 523
Query 420 ATTTCTAACTGATGGAGCTAGCAAAGGTGTGATGCAAATCTTGAATTGTGTCATACGCGG 479
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 524 ATTTCTAACTGATGGAGCGAGCAAAGGTGTGATGCAAATCTTGAATTGTGTCATACGCGG 583
Query 480 TCAGAAAGATGGAATTCTGGTTCCAGTTCCGCAATATCCACTCTACTCGGCTACTATATC 539
||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 584 TCAGAAAGACGGAATTCTGGTTCCAGTTCCACAGTATCCACTCTACTCGGCTACTATATC 643
Query 540 TCTGTTAGGTGGTACTCTTGTTCCTTACTATCTTGAAGAGTCTGAAAACTGGGGACTTGA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 644 TCTGTTAGGTGGTACTCTTGTTCCTTACTATCTTGAAGAGTCTGAAAACTGGGGACTTGA 703
Query 600 TGTTAACAACCTTCGCCAATCTGTTGCTCAGGCTCGCTCTCAAGGAATAACAGTAAGGGC 659
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 704 TGTTAACAACCTTCGCCAATCTGTTGCTCAAGCTCGCTCTCAAGGAATAACAGTAAGGGC 763
Query 660 AATGGTGATCATTAACCCCGGAAACCCAACTGGCCAGTGTCTTAGCGAAGCTAACTTAAG 719
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 764 AATGGTGATTATTAACCCCGGAAACCCAACTGGCCAGTGTCTTAGCGAAGCTAACATAAG 823
Query 720 AGAGATATTACGGTTCTGTTGTGATGAGAGATTAGTTCTTCTTGGAGACGAAGTGTATCA 779
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 824 AGAGATACTACGGTTCTGTTGTGATGAGAGATTAGTTCTTCTCGGAGACGAAGTGTATCA 883
Query 780 GCAAAACATATACCAAGATGAGCGTCCTTTTATCAGTTCCAAGAAGGTTTTGATGGATAT 839
|||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 884 GCAAAATATATACCAAGATGAACGTCCCTTTATCAGTTCCAAGAAGGTTTTGATGGATAT 943
Query 840 GGGAGCACCGATCAGCAAGGAAGTTCAGCTTATATCTTTCCACACCGTTTCCAAAGGATA 899
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 944 GGGAGCACCGATCAGCAAGGAAGTTCAGCTCATATCTTTCCACACCGTTTCCAAAGGATA 1003
Query 900 CTGGGGCGAGTGTGGGCAACGAGGCGGTTACTTTGAGATGACAAATATCCCTCCCAGGAC 959
||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1004 CTGGGGCGAATGTGGGCAACGGGGAGGTTACTTTGAGATGACAAATATCCCTCCCAGGAC 1063
Query 960 CGTTGAGGAGATATACAAGGTTGCCTCTATAGCTCTCAGTCCCAACGTCTCTGCACAGAT 1019
||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct 1064 CGTTGAGGAGATATACAAGGTGGCCTCTATAGCTCTCAGCCCCAACGTCTCTGCGCAGAT 1123
Query 1020 ATTTATGGGTTTAATGGTTAGCCCACCAAAGCCTGGAGACATTTCTTATGACCAATTCGT 1079
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1124 ATTTATGGGTTTAATGGTTAGCCCACCAAAGCCTGGAGACATTTCATATGACCAATTCGT 1183
Query 1080 TCGCGAAAGCAAGGGAATACTAGAATCACTGAGAAGAAGAGCAAGGATGATGACTGATGG 1139
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 TCGTGAGAGCAAGGGAATACTAGAATCACTGAGAAGAAGAGCAAGGATGATGACTGATGG 1243
Query 1140 ATTCAACAGTTGCAAAAACGTCGTCTGTAATTTCACAGAAGGTGCTATGTATTCGTTTCC 1199
||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1244 ATTCAACAGCTGCAAAAACGTCGTCTGTAATTTCACAGAAGGTGCTATGTATTCATTCCC 1303
Query 1200 TCAAATAAAGTTACCGTCGAAAGCAATCGAAGCAGCAAAACAAGCCGGAAAAGTCCCTGA 1259
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1304 TCAAATAAAGTTGCCGTCGAAAGCAATCCAAGCAGCAAAACAAGCCGGAAAAGTCCCTGA 1363
Query 1260 TGTTTTCTACTGCCTTAAGCTCTTAGAAGCCACAGGAATCTCCACAGTTCCAGGCTCTGG 1319
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1364 CGTTTTCTACTGCCTTAAGCTCTTAGAAGCCACAGGAATCTCCACAGTTCCAGGCTCTGG 1423
Query 1320 ATTTGGACAAAAAGAAGGGGTGTTTCATTTAAGGACAACAATTCTGCCAGCAGAAGAAGA 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1424 ATTTGGACAAAAAGAAGGGGTGTTTCATTTAAGGACAACAATTCTGCCAGCAGAAGAAGA 1483
Query 1380 AATGCCAGAGATTATGGACAGTTTCAAAAAGTTCAATGATGAGTTCATGTCTCAGTACGG 1439
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1484 AATGCCAGAGATTATGGACAGTTTCAAAAAGTTCAATGATGAGTTTATGTCTCAGTACGC 1543
Query 1440 TGATAATAACTTTGGTTACTCCAGAATGTGAAAA-GAAAAGGACTCAAGAGT 1490
|||||| ||||||||||||||||||||||||| |||| ||||| | ||||
Sbjct 1544 TGATAA---CTTTGGTTACTCCAGAATGTGAAAAAGAAA-GGACTTA-GAGT 1590
> AT1G23310.1 | Symbols: GGT1, AOAT1, GGAT1 | glutamate:glyoxylate
aminotransferase | chr1:8268416-8271933 REVERSE LENGTH=2086
Length=2086
Score = 1679 bits (909), Expect = 0.0
Identities = 1279/1459 (88%), Gaps = 19/1459 (1%)
Strand=Plus/Plus
Query 20 AAATGTCTCTCAAGGCATTAGACTACGAGT-CGCTGAATGAAAACGTCAAGAATTGTCAG 78
||||| |||||||||||||||||||||| | | |||||||||||||||||||| ||||||
Sbjct 335 AAATGGCTCTCAAGGCATTAGACTACGA-TACTCTGAATGAAAACGTCAAGAAGTGTCAG 393
Query 79 TATGCAGTCAGAGGTGAACTTTATCTCCGTGCTTCTGAGCTTCAGAAAGAAGGCAAAAAG 138
||||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 394 TATGCCGTAAGAGGTGAACTTTATCTCCGAGCTTCTGAGCTGCAGAAAGAAGGCAAAAAG 453
Query 139 ATTATTTTCACAAATGTTGGAAACCCTCATGCTTTAGGACAAAAGCC-TCTGACTTTTCC 197
|||||||||||||| ||||| |||||||||||||||||||| ||||| | |||| |||||
Sbjct 454 ATTATTTTCACAAACGTTGGGAACCCTCATGCTTTAGGACAGAAGCCAT-TGACATTTCC 512
Query 198 TCGTCAGGTGGTTGC-TTTATGCCAAGCACCATTTCTGCTAGATGATCCAAATATTGGTA 256
||| ||||||||||| || |||||||| || ||||| |||||||| |||||| |||| |
Sbjct 513 TCGCCAGGTGGTTGCGCTT-TGCCAAGCTCCGTTTCTACTAGATGACCCAAATGTTGGAA 571
Query 257 TGATATTCCCAGCAGATGCTATTGCAAGAGCTAAGCATTATCTTTCTTTGACTTCTGGTG 316
|| |||| ||||| |||||||||||||||||||| ||||||||||| |||||||| || |
Sbjct 572 TGCTATTTCCAGCTGATGCTATTGCAAGAGCTAAACATTATCTTTCCTTGACTTCAGGCG 631
Query 317 GTCTT-GGTGCTTACAGTGACTCAAGAGGCCTTCCGGGAGTTCGGAAAGAAGTTGCTGAG 375
|| || |||||||||||||| |||||||||||||| |||||| ||||||| |||||||||
Sbjct 632 GT-TTAGGTGCTTACAGTGATTCAAGAGGCCTTCCAGGAGTTAGGAAAGAGGTTGCTGAG 690
Query 376 TTCATTGAACGGCGTGATGGATATCCAAGCGACCCAGAACTCATATTTCTAACTGATGGA 435
|||||| ||||||||||||| |||||||| |||||||||||||| ||||| |||||||||
Sbjct 691 TTCATTCAACGGCGTGATGGGTATCCAAGTGACCCAGAACTCATCTTTCTCACTGATGGA 750
Query 436 GCTAGCAAAGGTGTGATGCAAATCTTGAATTGTGTCATACGCGGTCA-GAAAGATGGAAT 494
||||||||||||||||||||||||||||||||||| ||||||||| | | | ||||| ||
Sbjct 751 GCTAGCAAAGGTGTGATGCAAATCTTGAATTGTGTTATACGCGGTAATGGA-GATGGGAT 809
Query 495 TCTGGTTCCAGTTCCGCAATATCCACTCTACTCGGCTACTATATCTCTGTTAGGTGGTAC 554
||| ||||| ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct 810 TCTAGTTCCGGTTCCACAGTATCCACTTTACTCAGCTACCATATCACTGTTAGGTGGTAC 869
Query 555 TCTTGTTCCTTACTATCTTGAAGAGTCTGAAAACTGGGGACTTGATGTTAAC-AACCTTC 613
||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||
Sbjct 870 TCTTGTTCCTTACTATCTTGATGAGTCTGAAAACTGGGGACTTGATGTTG-CTAACCTTC 928
Query 614 GCCAATCTGTTGCTCAGGCTCGCTCTCAAGGAATAACAGTAAGGGCAATGGTGATCATTA 673
| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 929 GACAATCCGTTGCTCAGGCTCGTTCTCAAGGGATAACAGTAAGGGCAATGGTGATCATTA 988
Query 674 ACCCCGGAAACCCAACTGGCCAGTGTCTTAGCGAAGCTAACTTAAGAGAGATATT-ACGG 732
|||| || |||||||||||||||||||| |||||||||||| ||||||||||||| | |
Sbjct 989 ACCCTGGGAACCCAACTGGCCAGTGTCTAAGCGAAGCTAACATAAGAGAGATATTGAAG- 1047
Query 733 TTCTGTTGTGATGAGAGATTAGTTCTTCTTGGAGACGAAGTGTATCAGCAAAACATATAC 792
||||||| | | |||| | | |||||||| |||||||| || |||||||| |||||||||
Sbjct 1048 TTCTGTTATAACGAGAAACTGGTTCTTCTGGGAGACGAGGTTTATCAGCAGAACATATAC 1107
Query 793 CAAGATGAGCGTCCTTTTATCAGTTCCAAGAAGGTTTTGATGGATATGGGAGCACCGATC 852
|| ||||||||||| |||||||| |||||||||||||||||||| ||||| | ||| ||
Sbjct 1108 CAGGATGAGCGTCCCTTTATCAGCTCCAAGAAGGTTTTGATGGAAATGGGTTCGCCGTTC 1167
Query 853 AGCAAGGAAGTTCAGCTTATATCTTTCCACACCGTTTCCAAAGGATACTGGGGCGAGTGT 912
|||||||||||||||||| ||||||| ||||| || || |||||||| ||||| || |||
Sbjct 1168 AGCAAGGAAGTTCAGCTTGTATCTTTTCACACAGTCTCTAAAGGATATTGGGGTGAATGT 1227
Query 913 GGGCAACGAGGCGGTTACTTTGAGATGACAAATATCCCTCCCAGGACCGTTGAGGAGATA 972
|| || ||||| || |||||||||||||| || ||||||| ||| ||||||||||||
Sbjct 1228 GGACAGCGAGGTGGATACTTTGAGATGACCAACCTCCCTCCAAGGGTTGTTGAGGAGATA 1287
Query 973 TACAAGGTTGCCTCTATAGCTCTCAGTCCC-AACGTCTCTGCACAGATATTTATGGGTTT 1031
||||||||||| || || || ||||| ||| || |||||||| || || |||||||||||
Sbjct 1288 TACAAGGTTGCATCAATTGCCCTCAG-CCCTAATGTCTCTGCGCAAATCTTTATGGGTTT 1346
Query 1032 AATGGTTAGCCCACCAAAGCCTGGAGACATTTCTTATGACCAATTCGTTCGCGAAAGCAA 1091
||||||| || |||||||||||||||||||| |||||||| |||| || ||||||||
Sbjct 1347 GATGGTTAATCCTCCAAAGCCTGGAGACATTTCATATGACCAGTTCGCCCGTGAAAGCAA 1406
Query 1092 GGGAATACTAGAATCACTGAGAAGAAGAGCAAGGATGATGACTGATGGATTCAACAGTTG 1151
||| || || ||||| ||||||||||||||||| | ||||| |||||||||||||| ||
Sbjct 1407 GGGGATTCTTGAATCTTTGAGAAGAAGAGCAAGGCTCATGACAGATGGATTCAACAGCTG 1466
Query 1152 CAAAAACGTCGTCTGTAATTTCACAGAAGGTGCTATGTATTCGTTTCCTCAAATAAAGTT 1211
|||||||||||| || ||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 1467 CAAAAACGTCGTGTGCAATTTCACAGAAGGTGCAATGTATTCGTTTCCTCAAATACGGTT 1526
Query 1212 ACCGTCGAAAGCAATCGAAGCAGCAAAACAAGCCGGAAAAGTCCCTGATGTTTTCTACTG 1271
||| || ||| || |||| ||||||||||| |||||||| || || |||||||||||
Sbjct 1527 ACCAACGGGAGCTCTCCAAGCTGCAAAACAAGCTGGAAAAGTGCCAGACGTTTTCTACTG 1586
Query 1272 CCTTAAGCTCTTAGAAGCCACAGGAATCTCCACAGTTCCAGGCTCTGGATTTGGACAAAA 1331
|| |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 1587 TCTCAAGCTCTTAGAAGCCACAGGAATCTCCACAGTACCTGGCTCTGGATTTGGACAGAA 1646
Query 1332 AGAAGGGGTGTTTCATTTAAGGACAACAATTCTGCCAGCAGAAGAAGAAATGCCAGAGAT 1391
|||||| ||||| ||| | ||||||||||| |||||||||||||| || ||||| |||||
Sbjct 1647 AGAAGGTGTGTTCCATCTGAGGACAACAATCCTGCCAGCAGAAGATGAGATGCCGGAGAT 1706
Query 1392 TATGGACAGTTTCAAAAAGTTCAATGATGAGTTCATGTCTCAGTACGGTGATAATAACTT 1451
||||| || ||||| |||||||| || ||||||||| ||||||| ||||||||||||
Sbjct 1707 CATGGATAGCTTCAAGAAGTTCAACGACGAGTTCATGACTCAGTA---TGATAATAACTT 1763
Query 1452 TGGTTACTCCAGAATGTGA 1470
|||||| || | |||||||
Sbjct 1764 TGGTTATTCGAAAATGTGA 1782
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73493597880
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5