BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926401
Length=1522
Score E
Sequences producing significant alignments: (Bits) Value
AT1G70710.1 | Symbols: ATGH9B1, CEL1, GH9B1 | glycosyl hydrolas... 2534 0.0
AT1G23210.1 | Symbols: AtGH9B6, GH9B6 | glycosyl hydrolase 9B6 ... 1227 0.0
> AT1G70710.1 | Symbols: ATGH9B1, CEL1, GH9B1 | glycosyl hydrolase
9B1 | chr1:26659132-26663010 REVERSE LENGTH=1751
Length=1751
Score = 2534 bits (1372), Expect = 0.0
Identities = 1469/1517 (97%), Gaps = 2/1517 (0%)
Strand=Plus/Plus
Query 7 aaaaaaCAGAG--AAAAGAATGGCGCGAAAATCCCTAATTTTCCCGGTGATTTTGCTCGC 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 30 AAAAAACAGAGACAAAAGAATGGCGCGAAAATCCCTAATTTTCCCGGTGATTTTGCTCGC 89
Query 65 CGTTCTTCTTTTTTCTCCGCCGATTTACTCCGCCGGACACGATTACCGCGACGCTCTCCG 124
||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 90 CGTTCTTCTCTTCTCTCCGCCGATTTACTCCGCCGGTCACGATTACCGCGACGCTCTCCG 149
Query 125 TAAAAGCATTCTCTTCTTCGAAGGTCAACGTTCCGGTAAACTCCCTCCAGATCAACGCTT 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 150 TAAAAGCATTCTCTTCTTCGAAGGTCAACGTTCCGGTAAACTCCCTCCAGATCAACGCTT 209
Query 185 AAAATGGCGCCGTGACTCAGCATTACGCGACGGTTCCTCCGCCGGCGTTGATTTATCCGG 244
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 210 AAAATGGCGCCGTGACTCAGCATTACGCGACGGTTCCTCCGCCGGCGTTGACTTATCCGG 269
Query 245 AGGTTACTACGACGCCGGAGACAACATCAAATTCGGTTTTCCGATGGCCTTCACAACAAC 304
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 270 TGGTTACTACGACGCCGGAGACAACATCAAGTTCGGTTTTCCGATGGCGTTCACAACAAC 329
Query 305 GATGCTTTCATGGAGTATAATCGATTTCGGTAAAACCATGGGACCGGAGCTTAAAAACGC 364
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 330 GATGCTTTCATGGAGTATAATCGATTTCGGTAAAACCATGGGACCTGAGCTTAGAAACGC 389
Query 365 CGTGAAAGCTGTCAAATGGGGAACAGATTACCTCCTAAAAGCGACGGCGATTCCCGGAGT 424
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 390 CGTGAAAGCTGTTAAATGGGGAACAGATTACCTCCTTAAAGCGACGGCGATTCCCGGAGT 449
Query 425 AGTTTTCGTCCAAGTCGGAGACGCTTACTCCGATCATAACTGTTGGGAAAGACCTGAAGA 484
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 450 AGTCTTCGTCCAAGTCGGAGACGCTTACTCCGATCATAACTGTTGGGAAAGGCCTGAAGA 509
Query 485 TATGGACACACTTCGTACTGTTTACAAAATCGATAGAGCTCATCCTGGTTCTGACGTCGC 544
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 510 TATGGACACTCTCCGTACTGTTTACAAAATCGATAGAGCTCATCCTGGTTCTGACGTCGC 569
Query 545 CGGTGAAACCGCAGCCGCTTTAGCCGCCGCTTCAATCGTTTTTAGAAAACGCGATCCTTC 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 570 TGGTGAAACCGCAGCCGCTTTAGCCGCCGCTTCAATCGTTTTTAGAAAACGCGATCCTGC 629
Query 605 TTATTCCAGACTTCTTCTTGACCGTGCCACTAGAGTATTCGCGTTTGCTAACAGATATCG 664
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 630 TTATTCCAGACTTCTACTTGACCGTGCCACTAGGGTATTCGCGTTTGCTAACAGATATCG 689
Query 665 CGGCGCGTACAGTAACAGTCTCTACCACGCGGTTTGTCCTTTTTACTGTGATTTCAACGG 724
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 690 CGGCGCGTATAGTAACAGTCTCTACCACGCGGTTTGTCCTTTTTACTGTGATTTCAACGG 749
Query 725 TTACCAGGATGAGTTACTGTGGGGAGCGGCGTGGCTACACAAAGCCTCGAGGAAACGAGC 784
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 750 TTACCAGGATGAGTTACTGTGGGGAGCGGCATGGCTACACAAAGCCTCGAGGAAACGAGC 809
Query 785 GTACAGAGAATTCATTGTGAAGAACGAGGTGATTCTTAAGGCTGGAGATACCATTAATGA 844
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 810 GTACAGAGAATTCATTGTGAAGAACGAGGTCATTCTTAAGGCTGGAGATACCATTAATGA 869
Query 845 GTTTGGTTGGGACAATAAGCATGCTGGGATTAATGTCTTAATCTCCAAGGAAGTGTTAAT 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 870 GTTTGGTTGGGACAATAAGCATGCTGGGATTAATGTCTTAATCTCCAAGGAAGTGTTAAT 929
Query 905 GGGAAAAGCTGAGTATTTTGAGTCTTTCAAGCAAAACGCAGATGGGTTTATCTGTTCTAT 964
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 930 GGGAAAAGCAGAGTATTTTGAGTCTTTCAAGCAGAACGCAGATGGGTTTATCTGTTCTAT 989
Query 965 ATTGCCTGGAATTTCTCACCCTCAAGTCCAATACTCTCGAGGAGGGTTACTAGTGAAGAC 1024
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 990 ATTGCCTGGAATTTCTCACCCCCAAGTCCAATACTCTCGAGGAGGGCTACTAGTGAAGAC 1049
Query 1025 TGGAGGGAGTAACATGCAACATGTAACATCGCTATCTTTCCTCCTATTGGCTTACTCTAA 1084
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1050 TGGAGGGAGTAACATGCAACATGTAACATCACTATCTTTCCTCCTATTGGCTTACTCTAA 1109
Query 1085 TTATCTGAGCCATGCCAAAAAGGTTGTGCCTTGTGGCGAATTAACTGCTTCCCCATCTCT 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 TTATCTGAGCCATGCCAAAAAGGTTGTGCCTTGTGGCGAATTAACTGCTTCCCCATCTCT 1169
Query 1145 CCTCCGTCAAATCGCCAAGCGTCAGGTGGATTACATTTTAGGAGACAACCCGATGGGATT 1204
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
Sbjct 1170 CCTCCGTCAAATCGCCAAGCGTCAGGTGGATTACATTCTCGGAGACAACCCGATGGGACT 1229
Query 1205 GTCTTACATGGTTGGATACGGTCAAAAGTTTCCACGTAGGATTCATCACCGTGGCAGCTC 1264
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1230 GTCTTACATGGTTGGATACGGTCAAAAGTTTCCACGTAGGATTCATCACCGTGGTAGCTC 1289
Query 1265 GGTTCCTTCGGTTTCAGCCCATCCGAGCCATATAGGATGCAAAGAAGGCTCTCGCTATTT 1324
|||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct 1290 GGTTCCTTCGGTTTCAGCCCATCCAAGCCACATAGGGTGCAAAGAAGGCTCTCGCTATTT 1349
Query 1325 CCTAAGCCCAAATCCTAACCCAAACCTTTTGGTTGGTGCTGTAGTCGGTGGACCTAATGT 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1350 CCTAAGCCCAAATCCTAACCCAAACCTTTTGGTTGGTGCTGTAGTCGGTGGACCTAATGT 1409
Query 1385 CACCGATGCTTTTCCAGATTCAAGACCTTACTTTCAACAGTCCGAGCCCACGACTTACAT 1444
||| ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct 1410 CACTGATGCTTTTCCGGATTCAAGACCTTACTTTCAGCAGTCTGAGCCCACGACTTATAT 1469
Query 1445 CAATGCACCACTCGTCGGCCTTCTCGGTTACTTCTCCGCCCATTCTTCTTGGCGATGAGC 1504
|||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1470 CAATGCACCACTAGTGGGCCTTCTCGGTTACTTCTCCGCCCATTCTACTTGGCGATGAGG 1529
Query 1505 GATGGTCTTATTAGTTA 1521
|| || ||||||| |||
Sbjct 1530 GAGGGCCTTATTACTTA 1546
> AT1G23210.1 | Symbols: AtGH9B6, GH9B6 | glycosyl hydrolase 9B6
| chr1:8240174-8242129 FORWARD LENGTH=1470
Length=1470
Score = 1227 bits (664), Expect = 0.0
Identities = 1224/1491 (82%), Gaps = 52/1491 (3%)
Strand=Plus/Plus
Query 24 ATGGCGCGAAAATCCCTAATTTTC-CCGGTGATTTTGCTCGCC--G-TTCTTCTTTTTTC 79
|||||| |||||||| | | | | |||| |||| |||||||| | |||| ||| ||||
Sbjct 1 ATGGCGGGAAAATCCTTTA-TGACTCCGGCGATTATGCTCGCCATGCTTCTCCTTATTTC 59
Query 80 TCCGCCGATTTACTCCGCCGGACACGATTACCGCGACGCTCTCCGTAAAAGCATTCTCTT 139
||| || ||| |||||| ||||| ||||||||||||||||| || ||||| |||||
Sbjct 60 ACCGGAGACTTA---CGCCGGTCACGACTACCGCGACGCTCTCCGCAAGAGCATCCTCTT 116
Query 140 CTTCGAAGGTCAACGTTCCGGTAAACTCCCTCCAGATCAACG-CTTAAAATGGCGCCGTG 198
||||||||||||||| ||||| ||||| || ||||||||||| ||| || ||||||||||
Sbjct 117 CTTCGAAGGTCAACGCTCCGGCAAACTTCCACCAGATCAACGCCTT-AAGTGGCGCCGTG 175
Query 199 ACTCAGCATTACGCGACGGTTCCTCCGCCGGCGTTGATTTATCCGGAGGTTACTACGACG 258
|||| || |||||||||||||| ||||||||||| |||||| | ||||| ||||||||||
Sbjct 176 ACTCCGCCTTACGCGACGGTTCTTCCGCCGGCGTGGATTTAACGGGAGGGTACTACGACG 235
Query 259 CCGGAGACAACATCAAATTCGGTTTTCCGATGGCCTTCACAACAACGATGCTTTCATGGA 318
| ||||||||| | |||||||| || |||||||| ||||| || || ||| | |||||||
Sbjct 236 CTGGAGACAACGTAAAATTCGGATTCCCGATGGCGTTCACGACGACAATGATGTCATGGA 295
Query 319 GTATAATCGATTTCGGTAAAACCATGGGACCGGAGCTTAAAAACGCCGTGAAAGCTGTCA 378
| | || |||||||||||||| ||||||||||||||| ||||||||||||||||| |||
Sbjct 296 GCGTCATAGATTTCGGTAAAACAATGGGACCGGAGCTTGAAAACGCCGTGAAAGCTATCA 355
Query 379 AATGGGGAACAGATTACCTCCTAAAAGCGACGGC-GATTCCCGGA-GTAGT-TTTCGTCC 435
|||||||||| ||||| ||| | |||||||| | ||||||| || || || ||| ||||
Sbjct 356 AATGGGGAACGGATTATCTCATGAAAGCGAC-TCAGATTCCC-GACGTCGTCTTT-GTCC 412
Query 436 AAGTCGGAGACGCTTACTCCGATCATAACTGTTGGGAAAGACCTGAAGATATGGACACAC 495
|||||||||||||||||||||||||||| ||||||||| | || || || ||||||||||
Sbjct 413 AAGTCGGAGACGCTTACTCCGATCATAATTGTTGGGAACGCCCCGAGGACATGGACACAC 472
Query 496 TTCGTACTGTTTACAAAATCGATAGAG-CTCATCCTGGTTCTGACGTCGCCGGTGAAACC 554
| || || ||||| |||||||||| || | ||| |||||||||| |||||||| ||||||
Sbjct 473 TACGAACCGTTTATAAAATCGATAAAGAC-CATTCTGGTTCTGAAGTCGCCGGAGAAACC 531
Query 555 GCAGCCGCTTTAGCCGCCGCTTCAATCGT-TTTTAGAAAACGCGATCCTTCT-TATTCCA 612
|| ||||| |||| ||||| |||||||| ||| | |||||||||||| | || ||||
Sbjct 532 GCCGCCGCACTAGCAGCCGCATCAATCGTGTTTGA-AAAACGCGATCC-AGTATACTCCA 589
Query 613 GACTTCTTCTTGACCGTGCCACTAGAGTATTCGCGTTTG-CTAACAGATATCGCGGCGCG 671
| | || || ||||| || || || || || ||||| | | || || || || || |||
Sbjct 590 AAATGCTCCTGGACCGAGCAACAAGGGTGTTTGCGTTCGCCCAAAAG-TACCGAGGAGCG 648
Query 672 TACAGTAACAGTCTCTACCACGCGGTTTGTCCTTTTTACTGTGATTTCAACGGTTACCAG 731
|||||| | ||||| || || || || |||||||||||||| ||||||||||||||| ||
Sbjct 649 TACAGTGATAGTCTTTATCAAGCAGTGTGTCCTTTTTACTGCGATTTCAACGGTTACGAG 708
Query 732 GATGAGTTACTGTGGGGAGCGGCGTGGCTACACAAAGCCTCGAGGAAACGAGCGTACAGA 791
|||||||| || ||||||||||| |||||||| ||||| |||| |||||||| ||| |||
Sbjct 709 GATGAGTTGCTATGGGGAGCGGCTTGGCTACATAAAGCGTCGAAGAAACGAGTGTATAGA 768
Query 792 GAATTCATTGTGAAGAACGAGGTGATTCTTAAG-GCTGGAGATACCATTAATGAGTTTGG 850
|| ||||||||||||||| | || |||| |||| ||||||||||| || | || |||||
Sbjct 769 GAGTTCATTGTGAAGAACCAAGTTATTC-TAAGAGCTGGAGATACGATCCACGAATTTGG 827
Query 851 TTGGGACAATAAGCATGCTGGGATTAATGTCTTAATCTCCAAGGAA--GTGTTAATGGGA 908
|||||| ||||| ||||| ||||||||||||||| ||||||| || || || ||||||
Sbjct 828 TTGGGATAATAAACATGCCGGGATTAATGTCTTAGTCTCCAA--AATGGTATTGATGGGA 885
Query 909 AAAGCTGAGTATTTT--GAGTCTTTCAAGCAAAACGCAGATGGGTTTATCTGTTCTATAT 966
||||| ||||||||| |||| ||| ||||||||||| |||| ||||||||||||| |||
Sbjct 886 AAAGCAGAGTATTTTCAGAGT-TTT-AAGCAAAACGCTGATGAGTTTATCTGTTCTTTAT 943
Query 967 TGCCTGGAATTTCTCACCCTCAAGTCCAATACTCTCGAGGAGGGTTACTAGTGAAGACTG 1026
|||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||| ||
Sbjct 944 TGCCTGGAATTTCTCACCCTCAAGTCCAATACTCACAAGGAGGATTATTAGTGAAGAGTG 1003
Query 1027 GAGGGAGTAACATGCAACATGTAACATCGCTATCTTTCCTCCTATTGGCTTACTCTAATT 1086
|||| ||||| ||||||||||||||||| | ||||| | || | | ||||||||||
Sbjct 1004 GAGGAAGTAATATGCAACATGTAACATCTTTGTCTTTTTTGTTACTAACATACTCTAATT 1063
Query 1087 ATCTGAGCCATGCCAAA-AAGGTTGTGCCTTGTGGCGAATTAACTGCTTCCCCAT-CTCT 1144
| || ||||| || ||| ||||| ||||| ||||||||||| || ||||| || | ||||
Sbjct 1064 ACCTAAGCCACGC-AAATAAGGTGGTGCCATGTGGCGAATTTACAGCTTCTCC-TGCTCT 1121
Query 1145 CCTCCGTCAAATCGCCAAGCGTCAGGTGGATTACATTTTAGGAGACAACCCGATGGGATT 1204
||||||||| ||||||||||||||||||| ||||| ||||||| || || ||| | |
Sbjct 1122 TCTCCGTCAAGTCGCCAAGCGTCAGGTGGACTACATACTAGGAGATAATCCAATGAAAAT 1181
Query 1205 GTCTTACATGGTTGGATACGGT-CAAAAGTTTCCAC-GTAGGATTCATCACCGTGGCAGC 1262
||| ||||||||||| || ||| | | |||||||| | || |||||||| |||||||||
Sbjct 1182 GTCGTACATGGTTGGGTATGGTTCGAG-GTTTCCACAGAAG-ATTCATCATCGTGGCAGC 1239
Query 1263 TCGGTTCCTTCGGTT-TCAGCCCATCC-GAGCCATATAGGATGCAAAGAAGGCTCTCGCT 1320
||||||||||| ||| | | |||||| || | |||||| |||||||| || ||||| |
Sbjct 1240 TCGGTTCCTTCAGTTGTG-GACCATCCTGATCG-TATAGGGTGCAAAGACGGATCTCGTT 1297
Query 1321 ATTTCCTAAGCCCA-AATCCTAACCCAAACCTTT--TGGTTGGTGCTGTAGTCGGTGGAC 1377
||||| | ||| | |||||||| || || ||| | |||| || || || ||||| |
Sbjct 1298 ATTTCTTCAGCA-ATAATCCTAATCCTAA--TTTGCTAATTGGCGCCGTCGTTGGTGGGC 1354
Query 1378 CTAATGTCACCGATGCTTTTCCAGATTCAAGACCTTACTTTCAACAGTCCGAGCCCACGA 1437
||||| ||||||| | |||||| ||||| |||||||||||||| | | | |||||||| |
Sbjct 1355 CTAATATCACCGACGATTTTCCTGATTCGAGACCTTACTTTCAGCTGACTGAGCCCACTA 1414
Query 1438 CTTACATCAATGCACCACTCGTCGGCCTTCTCGGTTACTTCTCCGCCCATT 1488
|||| ||||| ||||| || | ||||| || ||||| ||||| |||||||
Sbjct 1415 CTTATATCAACGCACCTCTTTTGGGCCTACTTGGTTATTTCTCGGCCCATT 1465
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75100015320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5