BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg926438

Length=370
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G24670.2 | Symbols:  | Cytidine/deoxycytidylate deaminase fa...   255    2e-67


> AT5G24670.2 | Symbols:  | Cytidine/deoxycytidylate deaminase 
family protein | chr5:8447954-8451078 FORWARD LENGTH=1800
Length=1800

 Score =  255 bits (138),  Expect = 2e-67
 Identities = 156/165 (95%), Gaps = 0/165 (0%)
 Strand=Plus/Plus

Query  92    CAATATAGATGGCATTGGTGGGTTTAGCGAGGAGGACACACAATCGATCTCCAAGTTCAT  151
             ||||||||||||||| |||||||| ||||||||||| |||||||| |||| |||||||||
Sbjct  973   CAATATAGATGGCATCGGTGGGTTCAGCGAGGAGGAAACACAATCAATCTGCAAGTTCAT  1032

Query  152   GAGAGTTGTTATTGATATGGCAGTATCTGGTCCTAAACCACTTGTAAATGCTGCAGTGAT  211
             |||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||
Sbjct  1033  GAGAGTTGTTATTGATATGGCAGTATCTGGTCATACACCACTTGTGAATGCTGCAGTGAT  1092

Query  212   AGTTGATCCTTCAGTTAGGCGAATAATAGCTACTGAAACTGATCA  256
             |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  1093  AGTTGATCCTTCAGTTAGGCGAATAATAGCTAGTGAAACTGATCA  1137



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 17392641154


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5