BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg926491

Length=286
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G24670.2 | Symbols:  | Cytidine/deoxycytidylate deaminase fa...   219    2e-56


> AT5G24670.2 | Symbols:  | Cytidine/deoxycytidylate deaminase 
family protein | chr5:8447954-8451078 FORWARD LENGTH=1800
Length=1800

 Score =  219 bits (118),  Expect = 2e-56
 Identities = 128/133 (96%), Gaps = 0/133 (0%)
 Strand=Plus/Plus

Query  108   AGCGGAGAAGAAACTCTTAGAGATCCTTCAATAGAAAGGCCGTACCTCTGCACTGGTTAT  167
             ||| ||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct  1496  AGCAGAGAAGAGACTGTTAGAGATCCTTCAATGGAAAGGCCGTACCTCTGCACTGGTTAT  1555

Query  168   GACATTTTCCTCATGTTGGAGCCTTGTACAATGTGTGCTATGGCGCTTGTGCATCAAAGA  227
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1556  GACATTTTCCTCCTGTTGGAGCCTTGTACAATGTGTGCTATGGCGCTTGTGCATCAAAGA  1615

Query  228   ATAAAACGGATTT  240
             |||||||||||||
Sbjct  1616  ATAAAACGGATTT  1628



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 13170150238


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5