BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926502
Length=2740
Score E
Sequences producing significant alignments: (Bits) Value
AT1G71410.1 | Symbols: | ARM repeat superfamily protein | chr1... 3799 0.0
AT1G22870.1 | Symbols: | Protein kinase family protein with AR... 2268 0.0
> AT1G71410.1 | Symbols: | ARM repeat superfamily protein | chr1:26912726-26917712
REVERSE LENGTH=3271
Length=3271
Score = 3799 bits (2057), Expect = 0.0
Identities = 2236/2323 (96%), Gaps = 10/2323 (0%)
Strand=Plus/Plus
Query 4 AATTCGATCCAGCAGAAATGTCGATAAATATGAAAACGTTTACTCAAGCTCTAGCTAGAA 63
|||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 181 AATTGGATCCAGCAGAAATGTCGATAAACATGAAAACATTTACTCAAGCTCTAGCTAGAA 240
Query 64 CCGCAGCTGTGATTGAGAAGACGGTTCATACCACAGTTCAGGAAGTTACGGGACCTAAA- 122
| || |||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 241 CGGCTGCTGTGATTGAGAAGACGGTTCATACCACAGTACAGGAAGTTACGGGACC-AAAG 299
Query 123 GCTCTTCAGGATTACGAGCTACTCGATCAGATCGGTTCCGCTGGTCCTGGTCTAGCTTGG 182
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 300 GCTCTTCAGGATTACGAGCTACTTGATCAGATCGGTTCCGCTGGTCCTGGTCTAGCTTGG 359
Query 183 AAGCTATACGCAGCTAAGGCGCGTGACTCCACGCGGCCACAGCAGTACCCGACGGTCTGT 242
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 360 AAGCTATACGCAGCTAAGGCGCGTGATTCCACGAGGCCACAGCAGTACCCGACGGTCTGT 419
Query 243 GTCTGGATGCTTGATAAGCGTGCTTTGTCTGAGGCTCGTGTACGAGCGGGGTTGTCTAAG 302
|| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 420 GTATGGATGCTTGATAAGCGTGCTTTGTCGGAGGCTCGTGTACGAGCGAATTTGTCTAAG 479
Query 303 GCAGCTGAAGATGCGTTTCTTGATCTGATTCGAGCTGATGCAGGGAAGCTTGTGAGGTTG 362
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 480 GCAGCTGAAGATGCGTTTCTTGATCTGATTCGAGCTGATGCGGGGAAGCTGGTGAGGTTG 539
Query 363 AGACATCCTGGTGTGGTTCATGTGGTGCAAGCACTTGATGAGAATAAGAATGCTATGGCT 422
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 540 AGGCATCCTGGTGTGGTTCATGTGGTGCAAGCGCTTGATGAGAATAAGAATGCTATGGCT 599
Query 423 TTAGTTACGGAGCCGCTTTTTGCTTCTGTGGCTAATGCGCTTGGGAATGTAGAGAATGTG 482
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 600 TTAGTTACGGAGCCGCTTTTTGCTTCTGTGGCTAATGCGCTTGGTAATGTTGAGAATGTG 659
Query 483 GCTAATGTGCCAAAAGATCTGAAATCAATGGAGATGAGCTTGTTGGAGGTGAAGCATGGT 542
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GGTAATGTGCCGAAAGATCTGAAATCAATGGAGATGAGCTTGTTGGAGGTGAAGCATGGT 719
Query 543 CTGCTCCAGATTTCTGAGACACTGAACTTTC-TACACAATAACGCAAATCTCATCCATCG 601
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 720 CTGCTCCAGATTTCTGAGACACTGAAC-TTCTTACACAATAACGCAAATCTCATCCATCG 778
Query 602 AGCTATATCTCCAGAGAATGTTCTTATTACTTCAGCTGGTTCTTGGAAGCTTGCCGGGTT 661
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 AGCCATTTCTCCAGAGAATGTTCTTATTACTTCAGCTGGTTCTTGGAAGCTTGCCGGGTT 838
Query 662 TGGGTTTGCTATTTCGA-CAGCACAGGCTGGGAATTTGGATAACATGCAAGCATTCCACT 720
||| ||||||||||| | |||||||||||||||||||||||||||||||| | |||||||
Sbjct 839 TGGTTTTGCTATTTC-AGCAGCACAGGCTGGGAATTTGGATAACATGCAATCGTTCCACT 897
Query 721 ATTCTGAATATGACGTCGAGGATTCGATACTGCCAGTCCAGCCATCCT-TAAATTACACT 779
|||||||||| |||||||||||||| ||||||||||||||||||| || |||||||||||
Sbjct 898 ATTCTGAATACGACGTCGAGGATTCAATACTGCCAGTCCAGCCAT-CTCTAAATTACACT 956
Query 780 GCACCGGAACTGATGCGGAGTAAAAGTCCTTCAGCTGGAGCTTCGTCGGACATTTTTAGT 839
||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 957 GCACCTGAACTGATGCGCAGCAAAAGTCCTTCAGCTGGAGCTTCGTCGGACATTTTTAGT 1016
Query 840 TTTGGATGCCTTGCCTATCATCTAGTTGCTCGGAAACCGTTGTTAGACTGCAATAATAAT 899
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 1017 TTTGGATGCCTTGCCTATCATTTAGTTGCTCGGAAACCGTTGTTTGACTGCAATAATAAT 1076
Query 900 GTCAAGATGTACATGAACACGTTGAACTATATAACAAATGAATCTTTCTCATCTATACCC 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 GTCAAGATGTACATGAACACGTTGAACTATATAACAAATGAATCTTTCTCATCTATACCC 1136
Query 960 TCGGACTTGGTATCTGATTTGCAAAGGATGCTATCAATGAACGAGTCCTTTAGACCAACA 1019
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1137 TCGGAATTGGTATCTGATTTGCAAAGGATGCTATCAACGAACGAGTCCTTTAGACCAACA 1196
Query 1020 GCATTAGATTTCACAGGATCAAATTTTTTCCGAAGTGACGCTAGGTTACGTGCTCTCCGC 1079
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1197 GCATTAGATTTCACAGGATCGAATTTTTTCCGAAGTGACGCTAGGTTACGTGCTCTCCGC 1256
Query 1080 TTCCTTGATCATATGCTTGAAAGAGATAATATGCAGAAGTCCGAGTTCTTAAAAGCATTA 1139
|||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 1257 TTCCTTGATCATTTGCTTGAAAGAGATAACATGCAAAAGTCCGAGTTCTTAAAAGCATTA 1316
Query 1140 TCAGATATGTGGAAAGATTTTGATTCCCGTGTATTACGGTATAAGGTGCTTCCACCTCTT 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 TCAGATATGTGGAAAGATTTTGATTCCCGTGTATTACGGTATAAGGTGCTTCCACCTCTT 1376
Query 1200 TGTGCGGAACTTAGGAATTTAGTTTTGCAACCAATGATCTTGCCAATGGTTCTAACTATA 1259
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1377 TGTGCGGAACTTAGGAATTTAGTTTTGCAACCAATAATCTTGCCAATGGTTCTAACTATA 1436
Query 1260 GCACAGTCCCAGGATAGAACTGATTTTGAACTGATAACACTTCCGGCTCTTGTTCCTGTT 1319
|||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1437 GCACAGTCTCAGGATAGAACTGACTTTGAGCTGATAACACTTCCGGCTCTTGTTCCTGTT 1496
Query 1320 CTGAGTACTGCTTCAGGAGATACATTACTGCTGCTTGT-AAAGCATGCCGAGCTTATTAC 1378
|||||||||||||||||||||||||||||||||||||| ||| ||||| || ||||||||
Sbjct 1497 CTGAGTACTGCTTCAGGAGATACATTACTGCTGCTTGTGAAA-CATGCAGATCTTATTAC 1555
Query 1379 TAACAAGACTGATAGTGAGCATCTTGTATCGCACGTCCTCCCTTTGCTTCTGCGGGCCTA 1438
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1556 TAACAAGACTGATAGTGAGCATCTTGTATCGCACGTCCTCCCTTTGCTTCTGCGAGCCTA 1615
Query 1439 CAATGATAACGATGTCCGCATTCAGGAGGAAGTTCTCAAAAGATCCACATCTGTTGCTAA 1498
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1616 CAATGATAACGATGTCCGCATTCAGGAGGAAGTTCTTAAAAGATCCACATCTGTGGCTAA 1675
Query 1499 GCAACTCGATGGTCAGGTTGTCAGGCAAGCAATTTTGCCTCGTGTTCATGGCTTGGCTCT 1558
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1676 GCAACTCGATGGTCAGGTTGTGAGGCAAGCAATTTTGCCTCGTGTTCATGGCTTGGCTCT 1735
Query 1559 CAAAACCACAGTTGCTGCGGTCAGAGTAAATGCTTTGCTCTGCTTAGCAGAGTTGGTGCA 1618
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1736 CAAAACTACAGTTGCTGCGGTCAGAGTAAATGCTTTGCTCTGCTTAGCTGAGTTGGTGCA 1795
Query 1619 AACGCTTGATAAGCCTGCTGCTATCGAAATTCTGCAAACAATTCAACGGTGTACTGCCGT 1678
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 1796 AACGCTTGATAAGCCTGCCGCTATCGAAATTCTGGAAACAATTCAACGGTGTACTGCCGT 1855
Query 1679 AGATCGTTCTGCACCCACCCTAATGTGTACCCTTGCTGTGGCAAACGCGATCCTCAAACA 1738
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1856 AGATCGTTCTGCACCAACCCTAATGTGTACCCTTGCTGTGGCAAACGCAATCCTCAAACA 1915
Query 1739 GTATGGAGTTGAATTCACAGCAGAACATGTTCTTACCCTGATGATGCCGCTGCTCACTGC 1798
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1916 GTATGGAGTTGAATTCACAGCAGAACATGTGCTTACCCTGATGATGCCGCTTCTCACTGC 1975
Query 1799 CCAACAACTGAACGTCCAGCAGTTTGCCAAATATATGTTATTTGTCAAGGATATTCTCAG 1858
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 1976 CCAACAACTGAACGTCCAACAGTTTGCCAAATATATGCTATTTGTCAAGGATATTCTCAG 2035
Query 1859 GAAAATAGAGGAAAAAAGAGGAGTTACAGTGAACGATTCCGGAGTCCCAGACGTGAAACC 1918
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 2036 GAAAATAGAGGAAAAAAGAGGAGTAACAGTGAACGATTCCGGAGTCCCAGAGGTGAAACC 2095
Query 1919 GCATTCTGTTGCCAATGGACTCCAGTTTCAATCATCGACCCAAACACCTGAGAAGGTTGC 1978
|||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 2096 GCATTCTGCTGCCAATGGACTCCAGTTTCAGTCATCAACCCAAATACCTGAGAAGGTTGC 2155
Query 1979 TTCTGCAGCCAAGAGCAGTCCTGCATGGGATGAAGATTGGGGTTCCCCGAGCAAAGATTC 2038
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2156 TTCTGCAGCCAAGAGCAGTCCTGCATGGGATGAAGATTGGGGCTCCCCGAGCAAAGATTC 2215
Query 2039 TGCTGTGGGAAATCCTGCTTCTTCTCATCATAACACACACCATCAATTTAACAAATCCAC 2098
|||||||||||||||||||||||||| |||||||||| || |||| ||||||||||||||
Sbjct 2216 TGCTGTGGGAAATCCTGCTTCTTCTCGTCATAACACAAACGATCAGTTTAACAAATCCAC 2275
Query 2099 AGATCAGTCACAGCCATCGATCATGTCTACTCTGCCCAACAAGACAACAGCGCCAACCAC 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2276 AGATCAGTCACAGCCATCGATCATGTCTACTCTGCCCAACAAGACAACAGCGCCAACAAC 2335
Query 2159 ATGCCCTGCAGTGGACATCGAGTGGCCTCCAAGGCAATCCTCAAGCCTCACTGCTCCAGC 2218
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2336 ATGCCCTGCAGTGGACATCGAGTGGCCTCCAAGGCAATCTTCAAGCCTCACTGCTCCAGC 2395
Query 2219 AACTGATAATCAGACACAACTAAACACGGGAACATCATTTACTCCGGGTTTCGATGAATT 2278
||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| ||
Sbjct 2396 AACTGATAATCAGACACAACTAAACACAGGAACATCATTTGCTTCGGGTTTCGATGAGTT 2455
Query 2279 AGATCCGTTTGCTAATTGGCCTCCACGTCCCAACAATGGTGCT 2321
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2456 AGATCCGTTTGCTAATTGGCCTCCACGTCCCAACAATGGTGCT 2498
Score = 665 bits (360), Expect = 0.0
Identities = 410/434 (94%), Gaps = 3/434 (1%)
Strand=Plus/Plus
Query 2305 GTCCCAACAATGGTGCTGCATCGAGTTTTAGCAACAATTTACCAGGCGGCACCCATTTTC 2364
||| ||| ||||| |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 2515 GTCTCAAGAATGGCGCTGCATCCAATTTTAGCAACAATTTACCAGGCGGCACCCATTTTC 2574
Query 2365 AGACAGCTAACAATGACAACTGGGCATTCAGCAACAATGCCGCCTTGTCTTCGCTAAAAC 2424
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 2575 AGACAGCTAACAATGACAACTGGGCATTCAGCAG---TGCCTCCTTGTCTTCGCTAAAAC 2631
Query 2425 CACCCCAGCAAGGGAATCCAGGTATCTCTGCAAATAATCAAGATCCAATAAACTCTTTCG 2484
|||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||
Sbjct 2632 CACCCCAGCAAGGGAATCAAGGTATCTCTGCAAATAATCAAGATCCACTCAACTCTTTCG 2691
Query 2485 GAGTACCAAAACAGAGCCAAGGAATGCCATCTTTCAGCAGTGGTTCATACAATAACCAGA 2544
| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 2692 GTGTACCAAAACAGAGCCAAGGAATGCCATCTTTCACCAGTGGTTCATACAACAACCAGA 2751
Query 2545 AGCCAGCAGACATCAGTTCCATATTCGGTTCAAGCAAAACCGAGCAGTCCGCAATGAAAC 2604
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 2752 AGCCAGCAGACATCAGTTCCATATTCGGTTCAAGCAAAACCGAACCGTCCGCAATGAAAC 2811
Query 2605 TTGCACCACCACCTTCAATAGCAATGGGAAGAGGAAGGGGGAGAGGTAGAGGTGGTACTG 2664
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2812 TCGCACCACCACCTTCAATAGCAATGGGAAGAGGAAGGGGTAGAGGTAGAGGTGGTACTG 2871
Query 2665 GCACACCTACCTCAAAGCCCAATGGTCCACAACCATCTCTATTGGATCTATTATGACCAC 2724
||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 2872 GCACATCTACCTCAAAGCCCAGTGGTTCACAACCATCTCTATTGGATCTATTATGACCAC 2931
Query 2725 AGTTCTCGGTGTTG 2738
|||||| |||||||
Sbjct 2932 AGTTCTTGGTGTTG 2945
> AT1G22870.1 | Symbols: | Protein kinase family protein with
ARM repeat domain | chr1:8089501-8094173 FORWARD LENGTH=2742
Length=2742
Score = 2268 bits (1228), Expect = 0.0
Identities = 1962/2313 (85%), Gaps = 64/2313 (3%)
Strand=Plus/Plus
Query 21 ATGTCGATAAATATGAAAACGTTTACTCAAGCTCTAGCTAGAACCGCAGCTGTGATTGAG 80
|||||||| ||||||| |||| | || ||||| ||||| | ||| || || |||||||||
Sbjct 1 ATGTCGATTAATATGAGAACGCTAACGCAAGCACTAGCCAAAACGGCTGCAGTGATTGAG 60
Query 81 AAGACGGTTCATACCACAGTTCAGGAAGTTACGGGACCTAAAGCTCTTCAGGATTACGAG 140
||||||||||| |||||||| ||||| ||||| || || ||| |||| || || ||||||
Sbjct 61 AAGACGGTTCAAACCACAGTCCAGGAGGTTACAGGTCCCAAACCTCTACAAGACTACGAG 120
Query 141 CTACTCGATCAGATCGGTTCCGCTGGTCCTGGTCTAGCTTGGAAGCTATACGCAGCTAAG 200
|| ||||||||||||||||||| |||||||||||| ||||||||||| ||| | || |||
Sbjct 121 CTTCTCGATCAGATCGGTTCCGGTGGTCCTGGTCTCGCTTGGAAGCTTTACTCCGCCAAG 180
Query 201 GCGCGTGACTCCACGCGGCCACAGCAGTACCCGACGGTCTGTGTCTGGATGCTTGATAAG 260
|| ||||||||||||||||| |||||||| || || || || |||||| |||||||||||
Sbjct 181 GCACGTGACTCCACGCGGCCTCAGCAGTATCCAACAGTTTGCGTCTGGGTGCTTGATAAG 240
Query 261 CGTGCTTTGTCTGAGGCTCGTG-TACGAGCGGGGTTGTCTAAGGCAGCTGAAGATGCGTT 319
|| ||||| ||||||||||||| || | ||||| || ||||| || ||||||||||||||
Sbjct 241 CGCGCTTTATCTGAGGCTCGTGCTA-GGGCGGGATTATCTAAAGCTGCTGAAGATGCGTT 299
Query 320 TCTTGATCTGATTCGAGCTGATGCAGGGAAGCTTGTGAGGTTGAGACATCCTGGTGTGGT 379
||| ||| ||||||| |||||| | |||||||||||| ||||||||||||| ||||||||
Sbjct 300 TCTCGATTTGATTCGTGCTGATTCGGGGAAGCTTGTGCGGTTGAGACATCCCGGTGTGGT 359
Query 380 TCATGTGGTGCAAGCACTTGATGAGAATAAGAATGCTATGGCTTTAGTTACGGAGCCGCT 439
|||||| || || || ||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 360 TCATGTTGTTCAGGCGCTTGATGAGAATAAGAATGCTATGGCTATGGTTACGGAGCCGCT 419
Query 440 TTTTGCTTCTGTGGCTAATGCGCTTGGGAATGTAGAGAATGTGGCTAATGTGCCAAAAGA 499
|| || || ||||||||||||||||||||||| || ||||| | ||| || || |||||
Sbjct 420 CTTCGCATCCGTGGCTAATGCGCTTGGGAATGTGGAAAATGTTGATAACGTTCCCAAAGA 479
Query 500 TCTGAAATCAATGGAGATGAGCTTGTTGGAGGTGAAGCATGGTCTGCTCCAGATTTCTGA 559
||| || || ||||||||||||||||||||||||||||||||||| ||||| ||| | ||
Sbjct 480 TCTTAAGTCCATGGAGATGAGCTTGTTGGAGGTGAAGCATGGTCTTCTCCAAATTGCAGA 539
Query 560 GACACTGAACTTTCTACACAATAACGCAAATCTCATCCATCGAGCTATATCTCCAGAGAA 619
|||| |||||||||| || |||||||| |||| || ||||| ||| ||||||| |||||
Sbjct 540 GACATTGAACTTTCTTCATAATAACGCCCATCTTATTCATCGTGCTGTATCTCCGGAGAA 599
Query 620 TGTTCTTATTACTTCAGCTGGTTCTTGGAAGCTTGCCGGGTTTGGGTTTGCTATTTCGAC 679
||| |||||||||| |||||||| |||||||||||||| ||||| ||||||||||| ||
Sbjct 600 CGTTTTTATTACTTCGGCTGGTTCCTGGAAGCTTGCCGGATTTGGCTTTGCTATTTC-AC 658
Query 680 -AGCACAGGCTGGGAATTTGGATAACATGCAAGCATTCCACTATTCTGAATATGACGTCG 738
|||||||| |||||||||||||||| ||||| |||||||||| ||||||||||| || |
Sbjct 659 AAGCACAGGATGGGAATTTGGATAACTTGCAATCATTCCACTACTCTGAATATGATGTTG 718
Query 739 AGGATTCGATACTGCCAGTCCAGCCATCCTTAAATTACACTGCACCGGAACTGATGCGGA 798
|||| || || |||||| |||| ||||| |||||||| |||||||| ||| || ||||||
Sbjct 719 AGGACTCAATCCTGCCACTCCAACCATCTTTAAATTATACTGCACCTGAATTGGTGCGGA 778
Query 799 GTAAAAGTCCTTCAGCTGGAGCTTCGTCGGACATTTTTAGTTTTGGATGCCTTGCCTATC 858
| |||| | |||| ||||||| ||| || || ||||||||||| |||||||| | ||||
Sbjct 779 GCAAAACTTCTTCGGCTGGAGTTTCTTCAGATATTTTTAGTTTCGGATGCCTCACTTATC 838
Query 859 ATCTAGTTGCTCGGAAACCGTTGTTAGACTG-CAATAATAATGTCAAGATGTACATGAAC 917
|| |||| || |||||||| ||||| || || | |||| |||||||||||||||||||||
Sbjct 839 ATTTAGTGGCACGGAAACCATTGTTTGATTGTC-ATAACAATGTCAAGATGTACATGAAC 897
Query 918 ACGTTGAACTATATAACAAATGAATCTTTCTCATCTATACCCTCGGACTTGGTATCTGAT 977
|| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 898 ACATTGAACTATTTAACAAATGAAACTTTCTCATCTATACCCTCGGACTTGGTATCTGAT 957
Query 978 TTGCAAAGGATGCTATCAATGAACGAGTCCTTTAGACCAACAGCATTAGATTTCACAGGA 1037
|| ||| |||||||||||||||||||||| | |||||||||||| |||||||||||||||
Sbjct 958 TTACAACGGATGCTATCAATGAACGAGTCATATAGACCAACAGCTTTAGATTTCACAGGA 1017
Query 1038 TCAAATTTTTTCCGAAGTGACGCTAGGTTACGTGCTCTCCGCTTCCTTGATCATATGCTT 1097
|| | |||||||||||| ||| ||||||| ||||| ||||| ||||||||||||||||||
Sbjct 1018 TCTAGTTTTTTCCGAAGCGACACTAGGTTGCGTGCCCTCCGTTTCCTTGATCATATGCTT 1077
Query 1098 GAAAGAGATAATATGCAGAAGTCCGAGTTCTTAAAAGCATTATCAGATATGTGGAAAGAT 1157
|| ||||| || ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1078 GAGAGAGACAACATGCAGAAGTCTGAGTTCTTAAAAGCATTATCAGATATGTGGAAAGAC 1137
Query 1158 TTTGATTCCCGTGTATTACGGTATAAGGTGCTTCCACCTCTTTGTGCGGAACTTAGGAAT 1217
|||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1138 TTTGATTCTCGTGTATTACGGTATAAGGTGCTTCCTCCTCTTTGTGCTGAACTTAGGAAT 1197
Query 1218 TTAGTTTTGCAACCAATGA-TCTTGCCAATGGTTCTAACTATAGCACAGTCCCAGGATAG 1276
|| ||| |||||||| ||| |||| || |||||||||||||||||| |||| |||||||
Sbjct 1198 TTGGTTATGCAACCAGTGATTCTT-CCCATGGTTCTAACTATAGCAGAGTCTCAGGATAA 1256
Query 1277 AACTGATTTTGAACTGATAACACTTCCGGCTCTTGTTCCTGTTC-TGAGTACTGCTTCAG 1335
|| ||| ||||| ||| ||| || || || |||||||||| || | ||||||||| | |
Sbjct 1257 AAATGACTTTGAGTTGACAACGCTCCCAGCCCTTGTTCCTG-TCTTAAGTACTGCTACGG 1315
Query 1336 GAGATACATTACTGCTGCTTGTAAAGCATGCCGAGCTTATTACTAACAAGACTGATAG-T 1394
| |||||||||||| ||||| |||||| ||| ||||| |||| |||||||||| || |
Sbjct 1316 GTGATACATTACTGTTGCTTATAAAGCGTGCAGAGCTAATTATTAACAAGACTAAT-GCA 1374
Query 1395 GAGCATCTTGTATCGCACGTCCTCCCTTTGCTTCTGCGGGCCTACAATGATAACGATGTC 1454
|||||||||||||| || ||||||||||||||||| || |||||||||||||| ||||||
Sbjct 1375 GAGCATCTTGTATCACATGTCCTCCCTTTGCTTCTCCGAGCCTACAATGATAATGATGTC 1434
Query 1455 CGCATTCAGGAGGAAGTTCTCAAAAGATCCACATCTGTTGCTAAGCAACTCGATGGTCAG 1514
|| || |||||||||||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct 1435 CGGATACAGGAGGAAGTTCTGAAAAGATCTACATCTGTTGCTAAACAACTCGATGGTCAG 1494
Query 1515 GTTGTCAGGCAAGCAATTTTGCCTCGTGTTCATGGCTTGGCTCTCAAAACCACAGTTGCT 1574
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1495 GTTGTAAGGCAAGCAATTTTGCCTCGTGTTCATGGCTTGGCTCTCAAAACCACAGTTGCT 1554
Query 1575 GCGGTCAGAGTAAATGCTTTGCTCTGCTTAGCAGAGTTGGTGCAAACGCTTGATAAGC-C 1633
|| |||||||||||||||||||| |||||||||||| |||| ||||| |||||||| | |
Sbjct 1555 GCCGTCAGAGTAAATGCTTTGCTTTGCTTAGCAGAGCTGGTTCAAACACTTGATAAACTC 1614
Query 1634 TGCTGCTA-TCGAAATTCTGCAAACAATTCAACGGTGTACTGCCGTAGATCGTTCTGCAC 1692
|||| || | ||||||||||||||||||||||| |||||||| || |||||||||||||
Sbjct 1615 -GCTGTTACT-GAAATTCTGCAAACAATTCAACGCTGTACTGCTGTTGATCGTTCTGCAC 1672
Query 1693 CCACCCTAATGTGTACCCTTGCTGTGGCAAACGCGATCCTCAAACAGTATGGAGTTGAAT 1752
| ||||| |||||||| ||||| | |||||||| || ||||| ||||||||||||||||
Sbjct 1673 CGACCCTTATGTGTACTCTTGCAATCGCAAACGCAATTCTCAAGCAGTATGGAGTTGAAT 1732
Query 1753 TCACAGCAGAACATGTTCTTACCCTGATGATGCCGCTGCTCACTGCCCAACAACTGAACG 1812
|||| ||||||| || ||| ||||||| || || || ||||||||||||||| |||| |
Sbjct 1733 TCACTTCAGAACACGTACTTCCCCTGATTATACCACTTCTCACTGCCCAACAATTGAATG 1792
Query 1813 TCCAGCAGTTTGCCAAATATATGT-TATTTGTCAAGGATATTCTCAGGAAAATAGAGGAA 1871
|||| ||||||||||||||||| | |||||||||| ||||||||||||||||||||||||
Sbjct 1793 TCCAACAGTTTGCCAAATATAT-TCTATTTGTCAAAGATATTCTCAGGAAAATAGAGGAA 1851
Query 1872 AAAAGAGGAGTTACAGTGAACGATTCCGGAGTCCCAGACGTGAAACCGCATTCTGT-TGC 1930
|||||||||||||| || || ||||| ||||||||||| || ||||| | |||| ||
Sbjct 1852 AAAAGAGGAGTTACCGTAAATGATTCTGGAGTCCCAGAAGTAAAACC--AGGCTGTGTGG 1909
Query 1931 CA-ATGGACTCCAGTTTCAATCATCGACCCAAACACCTGAGAAGGTTGCTTCTGCAGCCA 1989
| |||| || ||||||||| || | ||| ||| | |||| ||||||||||||||||| |
Sbjct 1910 CGGATGGGCTTCAGTTTCAAACACCAACCAAAAAAACTGAAAAGGTTGCTTCTGCAGCAA 1969
Query 1990 AGAGCAGTCCTGCATGGGATGAAGATTGGGGT-TCCCCGAGCAAAGATT-CTGCTGTGGG 2047
||| |||||| ||||||||||||||||||| |||| || |||| ||| ||||| |
Sbjct 1970 AGAACAGTCCAGCATGGGATGAAGATTGGGCCCTCCC-GACCAAA-ATTTCTGCTCCAAG 2027
Query 2048 AAATCCTGCTTCTTCTCATCATAACACACACCATCAATTTAACAAATCCACAGATCAGTC 2107
| |||||| | | | || ||| | | | ||| |||||||| || |||| ||||||
Sbjct 2028 AGATCCTGGA-C--C-CG-CA-AACTCTC-C--TCAGTTTAACAATTCTACAGTTCAGTC 2078
Query 2108 ACAGCCATCGATCATGTCTACTCTGCCCAACAAGACAACAGCGCCAACCACATGCCCTGC 2167
|||| |||||| | | | | |||| ||| ||||| |||||||||||
Sbjct 2079 ACAGTCATCGA--A---C--C---G--------GACATCAGTACCAACAACATGCCCTGC 2120
Query 2168 AGTGGACATCGAGTGGCCTCCAAGGCAATCCT-CAA-GCCTCACTGCTCCAGCAA-CTGA 2224
||| ||| | |||||||||||||| ||||| | ||| ||| ||||||| ||| | || |
Sbjct 2121 AGTTGACCTAGAGTGGCCTCCAAGACAATCTTTCAATGCC--ACTGCTC-AGCCAGCTAA 2177
Query 2225 TAATCAGACACA-ACTAAACAC-G--GGAACATCATTTACTCCGGGTTTCGATGAATTAG 2280
| || |||| | | ||||| | | |||||| || |||||| |||| |||||| |||
Sbjct 2178 TGATGAGACTCGGA-TAAACGCAGCAGGAACACCAACAACTCCGAGTTTTGATGAACTAG 2236
Query 2281 ATCCGTTTGCTAATTGGCCTCCACGTCCCAACA 2313
| || |||||||| ||||| ||||| |||||||
Sbjct 2237 ACCCTTTTGCTAACTGGCCACCACGGCCCAACA 2269
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136102916359
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5