BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926538
Length=1920
Score E
Sequences producing significant alignments: (Bits) Value
AT1G71830.1 | Symbols: SERK1, ATSERK1 | somatic embryogenesis r... 3081 0.0
AT1G34210.1 | Symbols: SERK2, ATSERK2 | somatic embryogenesis r... 1332 0.0
> AT1G71830.1 | Symbols: SERK1, ATSERK1 | somatic embryogenesis
receptor-like kinase 1 | chr1:27018158-27022117 FORWARD LENGTH=2570
Length=2570
Score = 3081 bits (1668), Expect = 0.0
Identities = 1837/1921 (96%), Gaps = 2/1921 (0%)
Strand=Plus/Plus
Query 1 ATTTAGCATTGTTGTTCGAAATGGAGAT-GACTCGGGTGGTGTTTGTCTTACTTTCGTTG 59
|||||||||||||||| ||||||||| | || | ||||||||| |||||||||| ||
Sbjct 398 ATTTAGCATTGTTGTTTGAAATGGAG-TCGAGTTATGTGGTGTTTATCTTACTTTCACTG 456
Query 60 ATCTTACTTTCGAATCATTCACTGTGGCTTGCTTCTGCTAATTTGGAAGGTGATGCTTTG 119
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 457 ATCTTACTTCCGAATCATTCACTGTGGCTTGCTTCTGCTAATTTGGAAGGTGATGCTTTG 516
Query 120 CATACTTTGAGGGTCACTCTAGTTGATCCGAACAATGTCTTGCAGAGCTGGGATCCTACG 179
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 517 CATACTTTGAGGGTTACTCTAGTTGATCCAAACAATGTCTTGCAGAGCTGGGATCCTACG 576
Query 180 CTTGTGAATCCTTGTACATGGTTCCACGTCACTTGCAACAACGAGAACAGTGTCATTAGA 239
|| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 577 CTAGTGAATCCTTGCACATGGTTCCATGTCACTTGCAACAACGAGAACAGTGTCATAAGA 636
Query 240 GTTGATTTAGGAAATGCAGAGTTGTCTGGCCATTTAGTTCCGGAGCTTGGTGTGCTCAAG 299
|||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 637 GTTGATTTGGGGAATGCAGAGTTATCTGGCCATTTAGTTCCAGAGCTTGGTGTGCTCAAG 696
Query 300 AATCTGCAGTATTTGGAGCTTTACAGTAACAATATAACTGGCCCAATTCCTAGTAATCTT 359
||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 697 AATTTGCAGTATTTGGAGCTTTACAGTAACAACATAACTGGCCCGATTCCTAGTAATCTT 756
Query 360 GGAAATCTGACGAACTTAGTGAGCTTGGATCTTTACTTAAACAGCTTCACTGGTCCTATC 419
||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||||||
Sbjct 757 GGAAATCTGACAAACTTAGTGAGTTTGGATCTTTACTTAAACAGCTTCTCCGGTCCTATT 816
Query 420 CCTGAATCATTGGGAAAGCTTTCAAAGCTGAGGTTTCTCCGGCTGAACAACAACAGTCTC 479
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 817 CCGGAATCATTGGGAAAGCTTTCAAAGCTGAGATTTCTCCGGCTTAACAACAACAGTCTC 876
Query 480 ACTGGGTCAATTCCCATGGCACTGACTAATATCACTACCCTTCAAGTGTTAGATCTATCA 539
|||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||
Sbjct 877 ACTGGGTCAATTCCTATGTCACTGACCAATATTACTACCCTTCAAGTGTTAGATCTATCA 936
Query 540 AATAACCGACTCTCTGGTTCAGTTCCTGACAATGGCTCCTTCTCACTCTTCACACCCATC 599
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 937 AATAACAGACTCTCTGGTTCAGTTCCTGACAATGGCTCCTTCTCACTCTTCACACCCATC 996
Query 600 AGTTTTGCTAATAACTTAGACCTATGTGGACCTGTTACAAGTCACCCATGTCCTGGATCT 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 997 AGTTTTGCTAATAACTTAGACCTATGTGGACCTGTTACAAGTCACCCATGTCCTGGATCT 1056
Query 660 CCCCCGTTTTCTCCTCCGCCACCTTTTATTCCACCTCCACCAGTTTCCACCCCAAGTGGA 719
||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||
Sbjct 1057 CCCCCGTTTTCTCCTCCACCACCTTTTATTCAACCTCCCCCAGTTTCCACCCCGAGTGGG 1116
Query 720 TATGGTATAACTGGAGCAATAGCTGGTGGAGTTGCTGCAGGTGCTGCTTTGCTGTTTGCT 779
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1117 TATGGTATAACTGGAGCAATAGCTGGTGGAGTTGCTGCAGGTGCTGCTTTGCTCTTTGCT 1176
Query 780 GCTCCTGCAATAGCCTTTGCTTGGTGGCGGCGAAGAAAACCACTAGATATTTTCTTCGAT 839
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1177 GCTCCTGCAATAGCCTTTGCTTGGTGGCGACGAAGAAAGCCACTAGATATTTTCTTCGAT 1236
Query 840 GTGCCTGCCGAAGAAGATCCAGAGGTTCATCTGGGACAGCTCAAGAGGTTTTCTTTACGG 899
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1237 GTCCCTGCCGAAGAAGATCCAGAAGTTCATCTGGGACAGCTCAAGAGGTTTTCTTTGCGG 1296
Query 900 GAGCTACAAGTGGCGAGTGATGGATTTAGTAACAAGAATATTTTGGGTAGAGGCGGGTTC 959
||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct 1297 GAGCTACAAGTGGCGAGTGATGGGTTTAGTAACAAGAACATTTTGGGCAGAGGTGGGTTT 1356
Query 960 GGGAAAGTCTACAAGGGACGTTTGGCAGACGGAACTCTTGTTGCTGTCAAGAGACTGAAG 1019
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1357 GGGAAAGTCTACAAGGGACGCTTGGCAGACGGAACTCTTGTTGCTGTCAAGAGACTGAAG 1416
Query 1020 GAAGAGCGAACTCCAGGTGGAGAGCTCCAGTTTCAGACAGAAGTAGAGATGATAAGTATG 1079
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1417 GAAGAGCGAACTCCAGGTGGAGAGCTCCAGTTTCAAACAGAAGTAGAGATGATAAGTATG 1476
Query 1080 GCAGTTCATCGAAACCTGTTGAGATTACGAGGTTTCTGTATGACACCGACCGAGAGATTG 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1477 GCAGTTCATCGAAACCTGTTGAGATTACGAGGTTTCTGTATGACACCGACCGAGAGATTG 1536
Query 1140 CTCGTGTATCCTTACATGGCCAACGGAAGCGTTGCGTCGTGTCTCAGAGAGAGGCCACCG 1199
|| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct 1537 CTTGTGTATCCTTACATGGCCAATGGAAGTGTTGCTTCGTGTCTCAGAGAGAGGCCACCG 1596
Query 1200 TCACAGCCTCCACTCGATTGGCCAACGCGGAAGAGAATCGCGCTAGGCTCAGCTCGCGGT 1259
||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1597 TCACAACCTCCGCTTGATTGGCCAACGCGGAAGAGAATCGCGCTAGGCTCAGCTCGAGGT 1656
Query 1260 TTGTCTTACCTACACGATCACTGCGATCCGAAGATCATTCACCGTGACGTAAAAGCAGCA 1319
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657 TTGTCTTACCTACATGATCACTGCGATCCGAAGATCATTCACCGTGACGTAAAAGCAGCA 1716
Query 1320 AACATCCTCTTAGACGAAGAATTCGAAGCGGTTGTTGGAGATTTCGGGTTGGCGAAGCTA 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1717 AACATCCTCTTAGACGAAGAATTCGAAGCGGTTGTTGGAGATTTCGGGTTGGCAAAGCTA 1776
Query 1380 ATGGACTACAAAGACACTCACGTGACAACAGCCGTCCGTGGCACAATCGGTCACATCGCT 1439
|||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1777 ATGGACTATAAAGACACTCACGTGACAACAGCAGTCCGTGGCACCATCGGTCACATCGCT 1836
Query 1440 CCAGAATATCTCTCAACCGGAAAATCTTCAGAGAAAACCGACGTTTTCGGTTACGGAATC 1499
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1837 CCAGAATATCTCTCAACCGGAAAATCTTCAGAGAAAACCGACGTTTTCGGATACGGAATC 1896
Query 1500 ATGCTTCTGGAACTAATTACGGGACAAAGAGCTTTCGATCTCGCTCGGCTAGCTAACGAT 1559
|||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1897 ATGCTTCTAGAACTAATCACAGGACAAAGAGCTTTCGATCTCGCTCGGCTAGCTAACGAC 1956
Query 1560 GACGACGTCATGTTACTTGACTGGGTGAAAGGATTGTTGAAGGAGAAGAAGCTAGAGATG 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1957 GACGACGTCATGTTACTTGACTGGGTGAAAGGATTGTTGAAGGAGAAGAAGCTAGAGATG 2016
Query 1620 TTAGTGGATCCAGATCTTCAGACAAACTACGAGGAAAGAGAACTGGAACAAGTGATACAA 1679
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 2017 TTAGTGGATCCAGATCTTCAAACAAACTACGAGGAGAGAGAACTGGAACAAGTGATACAA 2076
Query 1680 GTGGCGTTGCTTTGCACGCAAGGATCACCAATGGAGAGACCAAAGATGTCTGAAGTTGTA 1739
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2077 GTGGCGTTGCTATGCACGCAAGGATCACCAATGGAAAGACCAAAGATGTCTGAAGTTGTA 2136
Query 1740 AGGATGCTTGAAGGAGATGGGCTTGCGGAGAGATGGGACGAGTGGCAAAAAGTTGAGATA 1799
|||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 2137 AGGATGCTGGAAGGAGATGGGCTTGCGGAGAAATGGGACGAATGGCAAAAAGTTGAGATT 2196
Query 1800 TTGAGGGAAGAGATTGATTTGAGTCCTAATCCTAACTCTGATTGGATTCTTGATTCTACT 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2197 TTGAGGGAAGAGATTGATTTGAGTCCTAATCCTAACTCTGATTGGATTCTTGATTCTACT 2256
Query 1860 TACAATTTGCACGCCGTTGAGTTATCTGGTCCAAGGTaaaaaaaaaaTTGATAAAATTAT 1919
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2257 TACAATTTGCACGCCGTTGAGTTATCTGGTCCAAGGTAAAAAAAAAAAACATAAAATTAT 2316
Query 1920 T 1920
|
Sbjct 2317 T 2317
> AT1G34210.1 | Symbols: SERK2, ATSERK2 | somatic embryogenesis
receptor-like kinase 2 | chr1:12458670-12462905 FORWARD LENGTH=2448
Length=2448
Score = 1332 bits (721), Expect = 0.0
Identities = 1484/1849 (80%), Gaps = 66/1849 (4%)
Strand=Plus/Plus
Query 84 TGGCTTGCTTCTGCTAATTTGGAAGGTGATGCTTTGCATACTTTGAG-GGTCACTCTAGT 142
|||||||| ||| |||| ||||||||||||| |||| | |||||| | | | ||||||
Sbjct 481 TGGCTTGCCTCTTCTAACATGGAAGGTGATGCACTGCACAGTTTGAGAGCT-AATCTAGT 539
Query 143 TGATCCGAACAATGTCTTGCAGAGCTGGGATCCTACGCTTGTGAATCCTTGTACATGGTT 202
|||||| || ||||||||||| |||||||||||||||||||| ||||| ||||| |||||
Sbjct 540 TGATCCAAATAATGTCTTGCAAAGCTGGGATCCTACGCTTGTTAATCCGTGTACTTGGTT 599
Query 203 CCACGTCACTTGCAACAACGAGAACAGTGTCATTAGAGTTGAT-TTAGGAAATGCAGAGT 261
||||| || || ||||||||||||||||| || ||||| ||| || || |||||||| |
Sbjct 600 TCACGTAACGTGTAACAACGAGAACAGTGTTATAAGAGTCGATCTT-GGGAATGCAGACT 658
Query 262 TGTCTGGCCATTTAGTTCCGGAGCTTGGTGTGCTCAAGAATC-TGCAGTATTTGGAGCTT 320
||||||| || || ||||| |||| ||| ||||||||| | ||||||| |||||||||
Sbjct 659 TGTCTGGTCAGTTGGTTCCTCAGCTAGGTCAGCTCAAGAA-CTTGCAGTACTTGGAGCTT 717
Query 321 TACAGTAACAATATAACTGGCCCAATTCCTAGTAATCTTGGAAATCTGACGAACTTAGTG 380
|| ||||| || ||||| || || |||| || ||||||| |||||||| |||||||||
Sbjct 718 TATAGTAATAACATAACCGGGCCGGTTCCAAGCGATCTTGGGAATCTGACAAACTTAGTG 777
Query 381 AGCTTGGATCTTTACTTAAACAGCTTCACTGGTCCTATCCCTGAATCAT-TGGGAAAGCT 439
||||||||||||||||| ||||||||||||||||| || || || || | | ||||||||
Sbjct 778 AGCTTGGATCTTTACTTGAACAGCTTCACTGGTCCAATTCCAGATTC-TCTAGGAAAGCT 836
Query 440 -TTCAAAGCTGAGGTTTCTCCGGCTGAACAACAACAGTCTCACTGGGTCAATTCCCATGG 498
||| ||||| | ||||| ||||| ||||| ||||||||||| || |||||||||||
Sbjct 837 ATTC-AAGCTTCGCTTTCTTCGGCTCAACAATAACAGTCTCACCGGACCAATTCCCATGT 895
Query 499 CACTGACTAATATCACT-ACCCTTCAAGTGTTAGATCTATCAAATAACCGACTCTCTGGT 557
|| |||||||||||| | ||||||||||| || ||||| || || |||||| | || ||
Sbjct 896 CATTGACTAATATCA-TGACCCTTCAAGTTTTGGATCTGTCGAACAACCGATTATCCGGA 954
Query 558 TCAGTTCCTGACAATGGCTCCTTCTCACTCTTCACACCCATCAGTTTTGCTAATAACTTA 617
|| |||||||| ||||| |||||||| |||||||| ||||||||||||||||| |||||
Sbjct 955 TCTGTTCCTGATAATGGTTCCTTCTCGCTCTTCACTCCCATCAGTTTTGCTAACAACTTG 1014
Query 618 GACCTATGTGGACCTGTTACAAGTCACCCATGTCCTGGATCTCCCCCGTTTTCTCCTCCG 677
|| ||||| || || ||||| || | || |||||||||||||||||||||||||||||
Sbjct 1015 GATCTATGCGGCCCAGTTACTAGCCGTCCTTGTCCTGGATCTCCCCCGTTTTCTCCTCCA 1074
Query 678 CCACCTTTTATTCCACCTCC-ACCAGTTTCC-ACCCCAAGTGGATATGGTA-TAACTGGA 734
||||||||||| |||||||| | |||| || || ||| |||| ||| || || |||||
Sbjct 1075 CCACCTTTTATACCACCTCCCAT-AGTT-CCTACACCAGGTGGGTATAGTGCTA-CTGGA 1131
Query 735 GCAATAGCTGGTGGAGTTGCTGCAGGTGCTGCTTTGCTGTTTGCTGCTCCTGCAATAGCC 794
|| || || || ||||||||||| ||||||||||| || |||||||| ||||| ||||
Sbjct 1132 GCCATTGCGGGAGGAGTTGCTGCTGGTGCTGCTTTACTATTTGCTGCCCCTGCTTTAGCT 1191
Query 795 TTTGCTTGGTGGCGGCGAAGAAAACCACTAGATATT-TTCTTCGATGTGCCTGCCGAAGA 853
|||||||||||||| |||||||||| | ||| ||| ||||| ||||| |||||||||||
Sbjct 1192 TTTGCTTGGTGGCGTAGAAGAAAACCTCAAGA-ATTCTTCTTTGATGTTCCTGCCGAAGA 1250
Query 854 AGATCCAGAGGTTCATCT-GGGACAGCTCAAGAGGTTTTCTTTACGGGAGCTACAAGTGG 912
|| || |||||||| || ||| ||||| ||| |||| ||| ||||||| || ||||| |
Sbjct 1251 GGACCCTGAGGTTCA-CTTGGGGCAGCTTAAGCGGTTCTCTCTACGGGAACTTCAAGTAG 1309
Query 913 CGAGTGATGGATTTAGTAACAAGAATATTTTGGGTAGAGGCGGGTTCGGGAAAGTCTACA 972
| | |||| | || || |||||||| |||||||| |||| |||||||| ||||||||||
Sbjct 1310 CAACTGATAGCTTCAGCAACAAGAACATTTTGGGCCGAGGTGGGTTCGGAAAAGTCTACA 1369
Query 973 AGGGACGT-TTGGCAGACGGAACTCTTGTTGCTGTCAAGA-GACTGAAGGAAGAGCGAAC 1030
| || ||| ||| | || ||||| |||||||| ||||| | | || || |||||||||||
Sbjct 1370 AAGGCCGTCTTG-CTGATGGAACACTTGTTGCAGTCAA-ACGGCTTAAAGAAGAGCGAAC 1427
Query 1031 TCCAGGTGGAGAGCTCCAGTTTCAGACAGAAGTAGAGATGATAAGTATGGCAGTTCATC- 1089
|||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct 1428 CCCAGGTGGCGAGCTCCAGTTTCAGACAGAAGTGGAGATGATAAGCATGGCCGTTCA-CA 1486
Query 1090 GAAACCTGTTGAGATTACGAGGTTTCTGTATGACACCGACCGAGAGATTGCTCGTGTATC 1149
|||| || | || |||| |||||||||||||| || |||||||||||||| || ||||
Sbjct 1487 GAAATCTCCTCAGGCTACGCGGTTTCTGTATGACCCCTACCGAGAGATTGCTTGTTTATC 1546
Query 1150 CTTACATGGCCAACGGAAGCGTTGCGTCGTGTCTCAGAGAGAGG-CCACCGTCACAGCCT 1208
|||||||||| || ||||| || || || ||| | ||||| | | ||||| |||||| |
Sbjct 1547 CTTACATGGCTAATGGAAGTGTCGCTTCCTGTTTGAGAGA-ACGTCCACCATCACAGT-T 1604
Query 1209 -CCACTCGATTGGCCAACGCGGA-AG-AGAATCGCGCTAGGCTCAGCTCGCGGTTTGTCT 1265
|| || | ||| ||| | | || | |||||||||||| ||||| | |||||||||
Sbjct 1605 GCCTCTAGCCTGGTCAATAAG-ACAGCA-AATCGCGCTAGGATCAGCGAGGGGTTTGTCT 1662
Query 1266 TACCTACACGATCACTGCGATCCGAAGATCATTCACCGTGACGTAAAAGCAGCAAACATC 1325
|| || || ||||| ||||| || || || ||||||||||| || ||||| || || ||
Sbjct 1663 TATCTTCATGATCATTGCGACCCCAAAATTATTCACCGTGATGTGAAAGCTGCTAATATT 1722
Query 1326 CTCTTAGACGAAGAATTCGAAGCGGTTGTTGGAGATTTCGGGTTGGCGA-AGCTAATGGA 1384
|| || ||||| ||||| || ||||| || || ||||||||||| || | | || |||||
Sbjct 1723 CTGTTGGACGAGGAATTTGAGGCGGTGGTAGGTGATTTCGGGTTAGCTAGA-CTTATGGA 1781
Query 1385 CTACAAAGACACTCACGTGACAACAGCCGTCCGTGGCACAATCGGTCACATCGCTCCAGA 1444
||| ||||| ||||| || ||||| || || ||||| || || || ||||| ||||| ||
Sbjct 1782 CTATAAAGATACTCATGTCACAACGGCTGTGCGTGGGACTATTGGACACATTGCTCCTGA 1841
Query 1445 ATATCTCTCAACCGGAAAATCTTCAGAGAAAACCGACGTTTTCGGTTACGGAATCATGCT 1504
||||||||||| |||||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct 1842 GTATCTCTCAACTGGAAAATCTTCAGAGAAAACTGATGTTTTTGGCTACGGGATCATGCT 1901
Query 1505 TCTGGAACTAATTACGGGACAAAGAGCTTTCGATCTCGCTCGGCTAGCTAACGATGACGA 1564
| ||||||| ||||| || || |||||||| ||||| || | || || || || || ||
Sbjct 1902 TTTGGAACTGATTACAGGTCAGAGAGCTTTTGATCTTGCAAGACTGGCGAATGACGATGA 1961
Query 1565 CGTCATGTTACTTGACTGGGTGAAAGGA-TTGTTGAAGGAGAAGAAGCTAGAGATG-TTA 1622
||| ||| | || || ||||||||||| || ||||||||||||||||| |||||| ||
Sbjct 1962 CGTTATGCTCCTAGATTGGGTGAAAGGGCTT-TTGAAGGAGAAGAAGCTGGAGATGCTT- 2019
Query 1623 GTGGATCCAGATCTTCAGA-CAA--ACTACGAGGAAAG-AGAACTGGAACAAG-TGATAC 1677
|||||||| || || || | ||| || || || || | |||| | ||||| | | ||||
Sbjct 2020 GTGGATCCTGACCTGCAAAGCAATTAC-AC-AG-AA-GCAGAAGTAGAACA-GCTCATAC 2074
Query 1678 AAGTGGCG-TTGCTTTGCACGCA-AGGATCACCAATGGAGA-GACCAAAGATGTCTGAAG 1734
||||||| || || ||||| || || ||||| ||||| | |||| ||||||||||| |
Sbjct 2075 AAGTGGCTCTT-CTCTGCACACAGAGC-TCACCTATGGA-ACGACCTAAGATGTCTGAGG 2131
Query 1735 TTGTAAGGATGCTTGAAGGAGATGGGCTT-GCGGAGAGATGGGACGAGTGGCAAAAAGTT 1793
|||| | ||||||||||| || || || ||||||| ||||||||||||||| |||||
Sbjct 2132 TTGTTCGAATGCTTGAAGGTGACGGT-TTAGCGGAGAAATGGGACGAGTGGCAGAAAGTG 2190
Query 1794 GA-GATATTGAGGGAAGAGATTG-ATTTGAGTCCTAATCCTAACTCTGATTGGATTCTTG 1851
|| | | | ||| |||| | || | | | || | || | |||||| ||||| ||||
Sbjct 2191 GAAGTTCTC-AGGCAAGA-AGTGGAGCTCTCTTCTCACCCCACCTCTGACTGGATCCTTG 2248
Query 1852 ATTCTACTTACAAT-TTGCACGCCGTTGAGTTATCTGGTCCAAGGTaaa 1899
|||| ||| | ||| || || || | ||||| ||||||||||| ||||
Sbjct 2249 ATTCGACTGATAATCTT-CATGCTATGGAGTTGTCTGGTCCAAGATAAA 2296
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95079832230
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5