BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg926663

Length=206
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G11830.2 | Symbols: PLDGAMMA2 | phospholipase D gamma 2 | ch...  93.5    7e-19


> AT4G11830.2 | Symbols: PLDGAMMA2 | phospholipase D gamma 2 | 
chr4:7115794-7121245 REVERSE LENGTH=3858
Length=3858

 Score = 93.5 bits (50),  Expect = 7e-19
 Identities = 52/53 (98%), Gaps = 0/53 (0%)
 Strand=Plus/Plus

Query  29   TGAAGAAATCTCAATCCAAGCACAGTCTTCACTCATCTTCCTTCTCTTCGGCC  81
            ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  216  TGAAGAAATCTCAATCCAAGCACAGTCTTCACTCATCTTCCTTCTCTTCCGCC  268



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 9205147233


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5