BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg926689

Length=333
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G73177.1 | Symbols: BNS | bonsai | chr1:27516572-27517854 RE...   167    7e-41


> AT1G73177.1 | Symbols: BNS | bonsai | chr1:27516572-27517854 
REVERSE LENGTH=432
Length=432

 Score =  167 bits (90),  Expect = 7e-41
 Identities = 94/96 (98%), Gaps = 0/96 (0%)
 Strand=Plus/Plus

Query  2    CAAGCTCCAGTTTTTCAAATATGGCGGAAGTAAGTCTTGGTATGCTTATAGACATTGTGG  61
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct  72   CAAGCTCCAGTTTTTCGAATATGGCGGAAGTAAGTCTTGGTATGCTTATAGACATTGTGG  131

Query  62   ACGAGGAGTGGATGAGGGACACTTTGCCTGATGATG  97
            |||| |||||||||||||||||||||||||||||||
Sbjct  132  ACGAAGAGTGGATGAGGGACACTTTGCCTGATGATG  167



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 15532734441


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5