BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926710 Length=1348 Score E Sequences producing significant alignments: (Bits) Value AT1G73380.1 | Symbols: | unknown protein; CONTAINS InterPro DO... 2023 0.0 > AT1G73380.1 | Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1308 (InterPro:IPR010733); Has 162 Blast hits to 160 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:27589032-27590822 FORWARD LENGTH=1538 Length=1538 Score = 2023 bits (1095), Expect = 0.0 Identities = 1275/1361 (94%), Gaps = 16/1361 (1%) Strand=Plus/Plus Query 1 AAGCAGACGACGGTGTTGGCCATGGAGATCGGAGAGATAGAGATAGCGAAACAGAGATGC 60 ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct 48 AAGCAGACGACGGTGTTGGTCATGGAGATAGGAGAGATAGAGATAGCGAAACAGAGATGC 107 Query 61 GAATCGGTTATAAGAACAATCGAGAATCTTCCTTTATCAACTGCAGTCACTGCTTCGTGC 120 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 108 GAATCGGTTATAAGAACAATCGAGAATCTTCCTTTATCAACTGCAATCACTGCTTCGTGC 167 Query 121 CGTCGCACActccttaagctcgcttcctccgagctctccttcctctcgtcactctcttcc 180 ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 168 CGTCGCACACTCCTTAAGCTCGCTTCCTCCGAGCTCTCCTTTCTCTCGTCTCTCTCTTCT 227 Query 181 gttccttctcc-acagcctctcAGTGTCAACATTGGCCACATTGAGTCAGTTGTACGGAT 239 | ||||||||| | | ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 228 GATCCTTCTCCGAAA-CCTCTCAGTGTCAACATTGGCCACATTGAATCAGTGGTACGGAT 286 Query 240 TTTGCAGCTCCCTTCCGTCACCGGCGTTTCGCGCGTTTGCAAACCGATTCCTCTTCCGAT 299 ||| ||||| || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 287 TTTACAGCTTCCGTCTATCACCGGCGTTTCGCGCGTTTGCAAACCGATTCCTCTTCCGAT 346 Query 300 TGGTGGCGTTCATGTTGATCTGGTATGTACTCTCGGAAAAGTTCCCGTATGGATCATCGT 359 ||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||| Sbjct 347 TGGTGGCGTTCATGTTGATCTCGTTTGTACTCTCGGAAAAGTTCCTGTATGGATCATCGT 406 Query 360 CTCTGATAGAAACCCTAGATACATCTCCTGGAGTGGAGATCGCCATGGAAGCAAAGGTTT 419 |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| Sbjct 407 CTCTGATAGAAACCCTAGGTACATCTCCTGGAACGGTGATCGCCATGGAAGCAAAGGTTT 466 Query 420 AAGATCTAGAATCGAACAGATTCTCGCCGCTGCTAATTCCACAACAACGCTAAAACCTTC 479 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 467 AAGATCTAGAATCGAACAGATTCTCGCCGCTGCTAATTCCACAACCACGCTTAAACCTTC 526 Query 480 TTCGGTGATTCTGTTCTTCGCAAATGGTTTACCTTGTTC-GATTTACGAGAAACTGAAAG 538 |||||||||||||||||||||||||||| | |||| ||| | |||||||||||||||||| Sbjct 527 TTCGGTGATTCTGTTCTTCGCAAATGGTCTCCCTTCTTCAG-TTTACGAGAAACTGAAAG 585 Query 539 ACGAATTTGGAGCTGCGCATTTCGATTT---CTTCGGG-CTGGATTCGGATTCGGATATT 594 | ||||| ||||||| | |||||||||| ||||| ||| |||||||||||||||| Sbjct 586 ATGAATTCGGAGCTGTGTATTTCGATTTTGGCTTCGATTCTG-ATTCGGATTCGGATATC 644 Query 595 TCAATGCTCGATGATTTCGATTGCGAATGGGTTAACGTTGTTCGAACCAGATCATATAAA 654 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 645 TCAATGCTCGATGATTTTGATTGCGAATGGGTTAACGTTGTTCGAACCAGATCATATAAA 704 Query 655 GAAGCAGTTTCTGTTGAGATCAAGCTCATAGATCAATGTGATTCACTTGCCTCTCCTGAA 714 |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 705 GAAGCAGTTTCTATTGAGATCAAGCTGATAGATCAATGTGATTCACTTGCTTCTCCTGAA 764 Query 715 ACTGAGGTTTTAGTTCAAGAAGATGTCACAGAGCTAAGCCAAAAAGATGTTTTTTCTTCT 774 ||||||||||||||||||| ||| |||||||||||||| |||||||||| ||||||| || Sbjct 765 ACTGAGGTTTTAGTTCAAGCAGAGGTCACAGAGCTAAGTCAAAAAGATGCTTTTTCTACT 824 Query 775 GTAATCTCCTCCATGAGATTGCTTGGTGAAGACTATCTCATTAATTTCGACACAACGGCT 834 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 825 GTAATCTCCTCCATGAGATTGCTTGGTGAAGACTGTCTCATTAATTTCGACACAACGGCT 884 Query 835 CTTGTTGCTCTCGTTTCTGGAATCAGTAACGGGTGTGCAGAGAGACTCGTGGATATGCCT 894 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 885 CTTGTTGCTCTCGTTTCCGGAATCAGTAATGGGTGTGCAGAGAGACTCGTGGATATGCCT 944 Query 895 GAGATCGACTTAGAAGAAAAGTTTAAGGGAAATACTGTTTTTGTGATCGCTCAGGCGAGA 954 |||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct 945 GAGATCGAATTAGAAGAAAAGTTTAAGGGCAATACCGTTTTTGTGATTGCTCAGGCGAGA 1004 Query 955 TCTGAAATTGAGAAGCCAGGTCTTGTCAAAATGGGAAGTGTATTATCAGGGAAGCGAGGG 1014 |||||||||||||||||||| ||||||||| |||||| |||||||||||||||||| || Sbjct 1005 TCTGAAATTGAGAAGCCAGGCCTTGTCAAAGTGGGAACTGTATTATCAGGGAAGCGTGGT 1064 Query 1015 ATTGTATGCAAGAGTGTTCTCTCAGAGTTCGAGGAGTTAGTATCCATGTATGCTGGACCC 1074 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 1065 ATTGTATGCAAGAGTGTTTTCTCAGAGTTCAAGGAGTTAGTATCCATGTATGCTGGACCC 1124 Query 1075 AATGAGAAACTCAGAGCTGAGCAGTTGTTGAAGAGCCTAATGGTGGTAAATGACAATCCC 1134 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 1125 AATGAGAAACTCAGAGCTGAACAGTTATTGAAGAGCCTAATGGTGGTAAATGACAATCCC 1184 Query 1135 TCAGAGCGTGTGATGAGCCTCCCAACAACGAGGAAGTTAGCGATGAAGAACAAGACTGTG 1194 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1185 TCAGAGCGTGTGATGAGTCTCCCAACAACGAGGAAGTTAGCGATGAAGAACAAGACTGTG 1244 Query 1195 TTTGGGACAGGTGATAGATGGGGAGCTCCTACATTGACTGCAAACATGGCGTTTGTCAGA 1254 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1245 TTTGGGACAGGTGATAGATGGGGAGCTCCTACCTTGACTGCAAACATGGCGTTTGTCAGA 1304 Query 1255 GCCGTGGCTCAATCGGGCATGTCTCTGGCCACTATCGATCATAGCCCTCGAGCTCTCACC 1314 ||||||||||| |||||||||||||| ||||||| || |||||||||||||||||||| Sbjct 1305 GCCGTGGCTCAGTCGGGCATGTCTCTTTCCACTATTGACCATAGCCCTCGAGCTCTCACT 1364 Query 1315 GGTGATTAAT-G-G--A--GTTCAA-CTGCTACCTATTCTG 1348 || ||||| | | | | |||||| || |||||||||||| Sbjct 1365 GGCGATTAGTCGTGTTAAAGTTCAAACTTCTACCTATTCTG 1405 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66365120490 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5