BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926777 Length=1979 Score E Sequences producing significant alignments: (Bits) Value AT1G73980.1 | Symbols: | Phosphoribulokinase / Uridine kinase ... 3236 0.0 > AT1G73980.1 | Symbols: | Phosphoribulokinase / Uridine kinase family | chr1:27820149-27824036 REVERSE LENGTH=2211 Length=2211 Score = 3236 bits (1752), Expect = 0.0 Identities = 1902/1977 (96%), Gaps = 0/1977 (0%) Strand=Plus/Plus Query 1 TTCTTCTTCATTTGAAACTTTGGGGCAATGGTGCTCGATAGTTCTGTTGCTCTGTCGCCT 60 |||||||||||||| ||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct 110 TTCTTCTTCATTTGCAACTTTGAGGCAATGGCGCTCGATAGTTCTGTTGCTCTGTCACCT 169 Query 61 CGCCGGCGGCATGGCCTGTTGCGGGATCAGGTTCAGCTTATTAAAAGAAAGGACTCTGGA 120 ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 170 CGCCGGCGGCATGGCTTGTTGCGAGATCAGGTTCAGCTTATAAAAAGAAAGGACTCTGGA 229 Query 121 AGATATGAAATAGTTCCAATTGAGGATCCATTGTCTTTTGAAAAAGGTTTCTACGCTGTT 180 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 230 AGATATGAGATAGTTCCAATAGAGGATCCATTGTCTTTTGAAAAAGGTTTCTACGCTGTT 289 Query 181 ATTCGTGCTTGTCAATTATTGGCTCAGAAGAACGATGGGCTCATTTTGGTTGGGTTAGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 290 ATTCGTGCTTGTCAATTATTGGCTCAGAAGAACGATGGGCTCATTTTGGTTGGGTTAGCT 349 Query 241 GGTCCTTCTGGAGCTGGCAAAACCATTTTCACTGAGAAGATCCTCAATTTTATGCCTAGT 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 350 GGTCCTTCTGGAGCTGGCAAAACCATTTTCACTGAGAAGATTCTCAATTTTATGCCTAGT 409 Query 301 ATTGCTATCATTAACATGGACAACTATAATGATGGTACTCGTGTGATCGATGGAAACTTT 360 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 410 ATTGCTATCATTAACATGGACAACTATAATGATGGTACTCGTGTTATCGATGGAAACTTT 469 Query 361 GATGATCCACGGTTGACTGACTATGATACACTTCTTGACAATATACATGGCCTAAGGGAT 420 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 470 GATGATCCAAGGTTGACTGACTATGATACACTTCTTGACAATATACATGGTCTAAGGGAT 529 Query 421 GGAAAACCTGTTCAGGTTCCAATATATGACTTTAAGTCGAGTTCTCGAATTGGTTACAGA 480 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 530 GGAAAACCTGTTCAGGTTCCAATATATGACTTCAAGTCGAGTTCTCGAATAGGTTACAGA 589 Query 481 ACACTTGAGGTGCCTAGCTCTCGCATTGTTATTCTTGAAGGCATATACGCTTTGAGTGAG 540 || |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 590 ACGCTTGAGGTGCCTAGCTCTCGCATTGTTATTCTAGAAGGCATATATGCTTTGAGTGAG 649 Query 541 AAACTACGGCCTTTGCTCGATCTTCGTGTCTCTGTCACTGGTGGAGTGCATTTTGATCTT 600 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 650 AAGCTACGGCCTTTGCTAGATCTTCGTGTCTCTGTCACTGGTGGAGTGCATTTTGATCTT 709 Query 601 GTCAAGCGTGTTTTGCGGGACATTCAACGTGCTGGCCAGGAACCTGAAGAAATTATTCAT 660 || |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 710 GTTAAGCGTGTTTTGCGGGACATTCAACGTGCTGGCCAGGAACCTGAAGAAATAATCCAT 769 Query 661 CAAATATCTGAGACGGTTTATCCTATGTACAAGGCGTTTATTGAACCTGATCTGAAGACA 720 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 770 CAGATATCTGAGACGGTTTATCCTATGTACAAGGCGTTTATTGAACCTGATCTGAAGACA 829 Query 721 GCTCAAATTAAGATCCTCAATAAGTTTAACCCCTTCAGTGGCTTTCAGAACCCAACATAT 780 ||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| Sbjct 830 GCTCAGATTAAGATCCTTAATAAGTTCAACCCATTCAGTGGCTTTCAGAACCCAACATAT 889 Query 781 ATTTTAAAGTCAACAAAGGCTGTAACACCAGAACAAGTGAAGGCAGCTCTGTCTGAAGAC 840 |||||||||||| |||||||||||||||| |||||| ||||||||||||| |||||||| Sbjct 890 ATTTTAAAGTCATCAAAGGCTGTAACACCCGAACAAATGAAGGCAGCTCTATCTGAAGAT 949 Query 841 TCCAAGGAACGTACAGAGGAAACTTATGACATCTATCTGCTACCACCAGGCGAGGATCCT 900 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 950 TTCAAGGAACGTACAGAGGAAACTTATGACATCTATCTGTTACCACCAGGCGAGGATCCT 1009 Query 901 GAAGCATGCCAATCCTACCTCAGAATGAGGAACCGGGATGGAAAATACAATCTCATGTTT 960 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1010 GAAGCATGCCAATCATACCTCAGAATGAGGAACCGAGATGGAAAATACAATCTCATGTTT 1069 Query 961 GAGGAGTGGGTTACAGATCGTCCATTTATTATATCACCCAGAATAACTTTTGAAGTTAGT 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1070 GAGGAGTGGGTTACAGATCGTCCATTTATTATATCACCCAGAATAACTTTTGAAGTTAGT 1129 Query 1021 GTTCGTCTTCTCGGAGGATTAATGGCACTGGGTTATACCATTGCAACAATCTTAAAAAGA 1080 ||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 1130 GTTCGTCTTCTTGGAGGATTAATGGCACTGGGTTATACCATTGCAACAATCCTGAAAAGA 1189 Query 1081 AAGAGTCATATCTTTGATGATGACAAGGTAATTGTGAAGACTGATTGGTTGGAACAACTG 1140 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1190 AAGAGTCATATCTTTGATGATGACAAGGTAATTGTGAAAACTGATTGGTTGGAACAACTG 1249 Query 1141 AATCGGACATATGTTCAGGTACAAGGTAAAGACCGTACCTTCGTCAAAAATGTGGCAGAC 1200 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1250 AATCGGACATATGTACAGGTACAAGGTAAAGACCGTACCTTTGTCAAAAATGTGGCAGAC 1309 Query 1201 CAACTTGGACTGGAAGGTTCATATGTTCCACATACATATATTGAACAGATACAGCTGGAG 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1310 CAACTTGGACTGGAAGGTTCATATGTTCCACATACATATATTGAACAGATACAGCTGGAG 1369 Query 1261 AGGCTTGTGAATGATGTTTTGGCTTTGCCAGATGACTTGAAAACAAAGCTTAGCTTAGAT 1320 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 1370 AGGCTTGTGAATGATGTTTTGGCTTTGCCAGATGACTTAAAAACAAAACTTAGCTTAGAT 1429 Query 1321 GATGATACAGTTTCTAGCCCTAAAGAAGCCCTCTCAAGAGCTTCTGTTGATAGTAGAATG 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1430 GATGATACAGTTTCTAGCCCTAAAGAAGCCCTCTCAAGAGCTTCTGTTGATAGTAGAATG 1489 Query 1381 AAATATCTTCACGGCGGTGTATCAAAGTCTTACACAAACCCAAGACACAAAGCCTTGCCT 1440 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 1490 AAATATCTTCACGGCGGCGTATCAAAGTCTTACACAAACCCAAGACACAAAGTCTTGCCT 1549 Query 1441 AACTTGACAAGACTTGCTGTTAACAATAGAATGTTAGATGCCAGAGCCCCTGCTTCACCG 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1550 AACTTGACAAGACTTGCTGTTAACAATAGAATGTTAGATGCCAGAGCCCCTGCTTCACCG 1609 Query 1501 GCCACTCTTCCAAATCAGGGTTTTATCACTCAGCTTTCAGACCAAATATCAACACTGAAC 1560 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1610 GCCACTCTTCCAAATCAGGGTTTTATCACTCAACTTTCAGACCAAATATCAACACTGAAC 1669 Query 1561 GAGAGGATGGATGAATTTACATCTCGCATTGAAGAGTTGAATTCCAAGATCCCGAACAGG 1620 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 1670 GAGAGGATGGATGAATTCACATCCCGCATTGAAGAGTTGAATTCCAAGATCCCGAACAGG 1729 Query 1621 ATAGCTGCTTCAGGTAGCCAACATAACTTGGCATTACCAATCGAAAATGGTAATGGGTCC 1680 |||||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||| Sbjct 1730 ATAGCTCCTTCAGGTAGTCAACATAACTTGGCTTTACCAATCGAAAACGGTAATGGGTCT 1789 Query 1681 GTCTTATCACTCTCCTCATCCGCATCTCAGCTCGTAAGGGAATCTCCTTTGATGGAAGAG 1740 ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1790 GTCTTATCATTCTCCGCATCCGCATCTCAGCTCGTAAGGGAATCTCCTCTGATGGAAGAG 1849 Query 1741 GTCATACTCATTGCTCGTGGACAGCGTCAGATAATGCTTCAAATGGACACACTGAGCAAT 1800 ||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct 1850 GTCGTACTGGTTGCTCGTGGACAGCGTCAGATAATGCATCAAATGGACACACTGAGTAAT 1909 Query 1801 CTTCTTCGGGAGTATGTTGGAGAAAGGTCTCGCATAGAAAGACTCGACAGCAACAGAACA 1860 ||||||||||||||||||||||||| | |||||||||| ||||||||||||| ||||||| Sbjct 1910 CTTCTTCGGGAGTATGTTGGAGAAAAGACTCGCATAGAGAGACTCGACAGCAGCAGAACA 1969 Query 1861 AACAGTAAAACACAAAACCTCGAATCCTCTACAGTACCTATTCTTCTTGGTTTGGCCATA 1920 ||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 1970 AACAGTACAACACAAAACCTCGAATCCTCTACTGTACCGATTCTTCTTGGTTTGGCCATT 2029 Query 1921 GGCTGTGTGGGCATTTTTGCCTACAGTCGTCTGAAATAGTTGCTGTAACTATGAAAA 1977 |||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||| Sbjct 2030 GGCTGTGTGGGCATCTTTGCCTACAGTCGTCTGAAATAGTTGCTCTAACTGTGGAAA 2086 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 98041664385 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5