BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926783
Length=1474
Score E
Sequences producing significant alignments: (Bits) Value
AT1G74030.1 | Symbols: ENO1 | enolase 1 | chr1:27839184-2784193... 2431 0.0
> AT1G74030.1 | Symbols: ENO1 | enolase 1 | chr1:27839184-27841939
REVERSE LENGTH=1753
Length=1753
Score = 2431 bits (1316), Expect = 0.0
Identities = 1420/1472 (96%), Gaps = 0/1472 (0%)
Strand=Plus/Plus
Query 3 TTTTTTAGGTATCGTGTAATGGCTTTGACTACAAAACCTCACCATCTTCAGAGATCTTTC 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21 TTTTTTAGGTATCGTGTAATGGCTTTGACTACAAAACCTCACCATCTTCAGAGATCTTTC 80
Query 63 CTCTCTCCGTCGCGTGTTTCCGGCCAACGATATTTGGAATCTGCGCCGTCATGTCTGAGA 122
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 81 CTCTCTCCGTCGCGTGTTTCCGGCGAACGATATTTGGAATCTGCGCCATCATGTCTGAGA 140
Query 123 TTCCGGCGCAGCGGTGTGCAATGCTCGGTGGTGGCTAAGGAGTGTAGAGTGAAAGGACTG 182
||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| ||
Sbjct 141 TTCCGTCGCAGCGGTGTCCAATGCTCGGTGGTGGCTAAGGAGTGCAGAGTGAAAGGAGTG 200
Query 183 AAAGCGAGGCAGATTATTGATAGTAGAGGGAATCCGACGGTGGAGGTTGATCTGATTACC 242
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 201 AAAGCGAGACAGATTATTGATAGTAGAGGGAATCCGACGGTGGAGGTTGATCTGATTACC 260
Query 243 GATGATCTGTATCGTTCGGCTGTTCCCAGTGGTGCATCGACCGGGATCTACGAAGCGCTT 302
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 261 GATGATCTGTATCGTTCGGCTGTTCCAAGTGGTGCATCTACCGGGATCTACGAAGCGCTT 320
Query 303 GAGCTTAGAGATGGAGATAAGAGCGTCTATGGTGGTAAAGGTGTCTTACAGGCTATTAGA 362
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct 321 GAGCTTAGAGATGGAGACAAGAGCGTCTATGGTGGTAAAGGTGTATTACAGGCTATTAAA 380
Query 363 AATATCAATGAACTTGTCGCTCCAAAACTCATCGGTGTTGACGTTAGGAACCAAGCTGAT 422
|| |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||
Sbjct 381 AACATCAATGAACTTGTGGCTCCAAAACTCATTGGAGTTGACGTTAGGAACCAAGCTGAT 440
Query 423 GTCGATGCTCTTATGCTGGAACTGGATGGGACCCCGAACAAGTCGAAACTCGGGGCTAAT 482
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 441 GTCGATGCTCTTATGCTGGAACTGGATGGGACCCCAAACAAGTCGAAACTCGGGGCTAAT 500
Query 483 GCTATATTAGGAGTATCACTGAGCGTTTGCAGGGCAGGTGCTGGAGCTAAAGGAGTGCCT 542
|| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 501 GCGATATTAGGAGTGTCATTGAGCGTTTGCAGGGCAGGTGCTGGAGCTAAAGGAGTGCCT 560
Query 543 TTGTACAAACACATCCAGGAGATATCGGGAACAAAGGAGCTTGTTATGCCAGTTCCTGCA 602
|||||||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||
Sbjct 561 TTGTACAAACACATCCAGGAAACATCAGGAACAAAGGAGCTTGTCATGCCAGTTCCTGCA 620
Query 603 TTCAATGTTATCAATGGAGGCAGTCACGCTGGGAATAGTTTGGCTATGCAAGAGTTTATG 662
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 621 TTCAATGTGATCAATGGAGGCAGTCATGCTGGGAATAGTTTGGCTATGCAAGAGTTTATG 680
Query 663 ATACTACCTGTAGGAGCAACCTCATTCTCAGAGGCCTTCCAGATGGGAAGTGAAGTTTAT 722
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 681 ATACTACCTGTAGGAGCTACCTCATTCTCGGAGGCCTTCCAGATGGGAAGTGAAGTTTAT 740
Query 723 CATACATTGAAGGGGATAATCAAAACTAAGTACGGTCAAGATGCTTGTAATGTTGGAGAT 782
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 741 CATACATTGAAGGGGATAATCAAAACTAAGTATGGTCAAGATGCTTGTAATGTCGGAGAT 800
Query 783 GAAGGAGGCTTTGCACCAAATGTTCAAGATAACAGAGAGGGACTAGTTCTGCTCATTGAT 842
|||||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct 801 GAAGGAGGGTTTGCGCCGAATGTTCAAGATAACAGAGAGGGACTAGTTCTGCTCATAGAT 860
Query 843 GCAATTGAAAAGGCCGGTTACACTGGAAAGATCAAAATAGGAATGGATGTTGCTGCATCA 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 861 GCAATTGAAAAGGCCGGTTACACTGGAAAGATCAAAATAGGAATGGATGTTGCTGCATCA 920
Query 903 GAATTTTTCATGAAAGACGGTAGATACGATTTGAACTTCAAGAAACAGCCAAACGATGGA 962
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 921 GAATTTTTCATGAAAGATGGTAGATACGATTTGAACTTCAAGAAACAGCCAAACGATGGA 980
Query 963 GCTCATGTTCTATCAGCTGAGAGTCTCGCTGATCTCTACAGAGAATTCATCAAGGATTTC 1022
||||| || || ||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct 981 GCTCACGTACTGTCAGCCGAGAGTCTTGCTGACCTCTACAGAGAATTCATCAAGGATTTC 1040
Query 1023 CCAATTGTCTCTATCGAAGATCCTTTTGACCAGGATGATTGGAGCTCATGGGCTTCATTG 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1041 CCAATTGTCTCTATCGAAGATCCTTTTGACCAGGATGATTGGAGCTCATGGGCTTCATTG 1100
Query 1083 CAAGCCTCTGTGGATATCCAACTCGTGGGAGATGACTTGTTGGTCACTAACCCGAAGAGG 1142
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1101 CAATCCTCTGTGGATATCCAACTCGTGGGAGATGACTTGTTAGTCACTAACCCGAAGAGG 1160
Query 1143 ATAGCTGAAGCTATTAAGAAAAAGTCTTGCAATGCTCTACTTTTGAAGGTTAACCAGATT 1202
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 1161 ATAGCTGAAGCTATTAAGAAACAGTCTTGCAATGCTCTACTCTTGAAGGTTAACCAGATT 1220
Query 1203 GGGACAGTGACCGAGTCAATTCAAGCAGCACTTGACTCAAAAGCTGCAGGCTGGGGTGTG 1262
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221 GGGACAGTCACTGAGTCAATTCAAGCAGCACTTGACTCAAAAGCTGCAGGCTGGGGTGTG 1280
Query 1263 ATGGTTAGTCACAGGAGTGGCGAGACAGAGGATAACTTCATCGCAGATCTTTCTGTTGGT 1322
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1281 ATGGTTAGTCACAGGAGTGGCGAGACAGAGGATAACTTCATCGCAGATCTCTCTGTTGGT 1340
Query 1323 TTAGCAAGCGGACAGATCAAAACTGGTGCTCCATGCCGAAGTGAACGATTGTCAAAATAC 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1341 TTAGCAAGCGGACAGATCAAAACTGGTGCTCCATGCCGAAGTGAACGATTGTCAAAATAC 1400
Query 1383 AACCAGCTTCTCCGTATCGAAGAGGAACTCGGCAATGTGCGGTACGCCGGAGAAGCTTTC 1442
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1401 AACCAGCTTCTCCGTATCGAAGAGGAACTCGGCAATGTGCGCTACGCCGGTGAAGCTTTC 1460
Query 1443 CGATCACCGTGAGAATTTCGAGAAAGGCACTC 1474
|||||||| |||||| ||||||||||||||||
Sbjct 1461 CGATCACCATGAGAAATTCGAGAAAGGCACTC 1492
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72690389160
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5