BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926796
Length=1057
Score E
Sequences producing significant alignments: (Bits) Value
AT1G74100.1 | Symbols: SOT16, ATSOT16, CORI-7, ATST5A | sulfotr... 1729 0.0
AT1G74090.1 | Symbols: SOT18, ATSOT18, ATST5B | desulfo-glucosi... 771 0.0
> AT1G74100.1 | Symbols: SOT16, ATSOT16, CORI-7, ATST5A | sulfotransferase
16 | chr1:27864345-27865694 REVERSE LENGTH=1350
Length=1350
Score = 1729 bits (936), Expect = 0.0
Identities = 1016/1056 (96%), Gaps = 0/1056 (0%)
Strand=Plus/Plus
Query 2 TCACTCGATCTCATCAGCAATGGAATCAAAGACAACCCAAAACGGATCCGAAGTCGTCGA 61
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 171 TCACTCGATCTCATCCGCAATGGAATCAAAGACAACCCAAAACGGATCCGAAGTCGTCGA 230
Query 62 ACTCACAGAGTTCGAGAAGACCCAGAAGAAGTACCACGATTTCATTGCTACGCTTCCAAA 121
|||||||||||||||||| |||||||||||||| || |||||||| ||||| ||||||||
Sbjct 231 ACTCACAGAGTTCGAGAAAACCCAGAAGAAGTATCAAGATTTCATCGCTACACTTCCAAA 290
Query 122 GAGCAAAGGCTGGAGACCCGATGAGATCTTAACTCAATATGGTGGACACTGGTGGCAAGA 181
|||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct 291 GAGCAAAGGCTGGAGACCAGATGAGATCTTAACCCAATACGGTGGACACTGGTGGCAAGA 350
Query 182 ATGTCTCCTCGAAGGTCTTTTTCACGCTAAAGACCATTTCGAAGCACGACCCACTGATTT 241
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 351 ATGTCTCCTCGAAGGTCTTTTTCACGCTAAAGACCATTTCGAAGCACGACCAACTGATTT 410
Query 242 CCTCGTCTGTAGCTACCCAAAAACCGGTACGACTTGGCTCAAAGCACTTACTTACGCAAT 301
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 411 CCTCGTCTGTAGCTACCCAAAAACCGGTACAACTTGGCTCAAAGCACTAACTTACGCAAT 470
Query 302 CGTCAATCGTTCTCGTTACGACGACGCCACAAACCCACTCCTCAAACGAAACCCTCACGA 361
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 471 CGTCAATCGTTCTCGTTACGACGACGCCGCAAACCCACTCCTCAAACGAAACCCTCACGA 530
Query 362 GTTCGTCCCTTACGTTGAGATCGATTTCGCGTTTTACCCGACCGTTGATGTTCTTCAAGA 421
||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 531 GTTTGTCCCTTACGTTGAGATCGACTTCGCGTTTTACCCCACCGTTGATGTTCTTCAAGA 590
Query 422 CAGAAAGAACCCACTTTTCTCCACCCATATCCCAAGCGGGTTATTACCCGATTCGATTGT 481
||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||
Sbjct 591 CAGAAAGAACCCACTTTTCTCTACTCATATCCCAAACGGGTTATTACCCGATTCGATTGT 650
Query 482 GAACTCGGGTTGTAAGATGGTGTACATATGGAGAGACCCGAAAGATACTTTCATCTCCAT 541
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 GAACTCTGGTTGTAAGATGGTGTACATATGGAGAGACCCGAAAGATACTTTCATCTCCAT 710
Query 542 GTGGACTTTCTTACACAAGGAGAAGTCTCAAGAAGGTCAATTAGCGAGTCTTGAGGAGAG 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 711 GTGGACTTTCTTACACAAGGAGAAGTCTCAAGAAGGTCAATTAGCGAGTCTTGAGGACAG 770
Query 602 CTTTGATATGTTTTGTAAAGGTTTATCTGTGTACGGTCCTTATCTGGATCATGTGTTAGG 661
||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct 771 CTTTGATATGTTTTGTAAAGGTTTATCTGTGTATGGTCCTTATCTGGATCATGTTTTGGG 830
Query 662 TTATTGGAAGGCTTATCAAGAGAATCCAGATAGGATTTTGTTCCTTAGGTATGAGACTAT 721
||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 831 TTATTGGAAAGCTTACCAAGAGAATCCAGATAGGATTTTGTTCCTTAGGTACGAGACCAT 890
Query 722 GAGAGCTAATCCTTTGCCTTTTGTGAAGAGATTGGCTGAGTTCATGGGTTATGGATTCAC 781
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 891 GAGGGCCAATCCTTTGCCTTTTGTGAAGAGATTGGCTGAGTTCATGGGTTATGGATTCAC 950
Query 782 GGATGAGGAAGAGGAGAAAGGTGTTGCTGAGAAAGTGGTGAAGCTTTGTAGCTTTGAGAC 841
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 951 TGATGAGGAAGAGGAGAATGGTGTTGCTGAGAAAGTGGTGAAGCTTTGTAGCTTTGAGAC 1010
Query 842 GTTGAAGAATCTTGAAGCTAACAAAGGAGATAAAGAAAGAGAGGATCGTCCTGCTGTTTA 901
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1011 GTTGAAGAATCTTGAAGCTAACAAAGGTGATAAAGAAAGAGAGGATCGTCCTGCTGTTTA 1070
Query 902 TGCGAATAGCGCGTATTTTAGGAAAGGAAAGGTTGGAGATTGGGCTAATTATCTGACTCC 961
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1071 TGCGAATAGCGCGTATTTTAGGAAAGGAAAGGTTGGAGATTGGGCTAATTATTTGACTCC 1130
Query 962 GGAGATGGCTGCTCGTATTGATGGTTTAGTGGAGGAAAAATTCAAAGATACTGGCTTGCT 1021
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1131 TGAGATGGCTGCTCGTATTGATGGCTTAGTGGAGGAGAAATTCAAAGATACTGGCTTGCT 1190
Query 1022 TCAACATGATAACTGAATGTGTCATCTTCTGGTCCT 1057
|||||||||||||||||||||| | ||||||||||
Sbjct 1191 TCAACATGATAACTGAATGTGTTTTATTCTGGTCCT 1226
> AT1G74090.1 | Symbols: SOT18, ATSOT18, ATST5B | desulfo-glucosinolate
sulfotransferase 18 | chr1:27862909-27864193 FORWARD
LENGTH=1285
Length=1285
Score = 771 bits (417), Expect = 0.0
Identities = 814/1000 (81%), Gaps = 50/1000 (5%)
Strand=Plus/Plus
Query 66 ACAGAGTTCGAGAAGACCCAGAAGAA--GTACCACGATTTCAT-TGCTACGCTTCC-AAA 121
|||||||||||||| | || || || ||| || || |||| | | ||| |||| |
Sbjct 176 ACAGAGTTCGAGAAAAATCA-AA-AACGGTATCAAGACCTCATCT-CCACGTTTCCTCAC 232
Query 122 GAGCAAAGGCTGGAGACCCG-ATGAGATCTTAACTC-AATATGGTGGACACTGGTGGCAA 179
||| |||||||||||| ||| | ||| | | | || | |||||||| ||||||||| |
Sbjct 233 GAG-AAAGGCTGGAGA-CCGAAAGAGCCCCTGA-TCGAGTATGGTGGTTACTGGTGGCTA 289
Query 180 GAATGTCTCCTCGAAGGTCT-TTTTCACGC-TAA-AGACCATTTCGAAGCACGACCCACT 236
| ||||||||||||| | | ||||||| || || | |||| |||||||||||| |
Sbjct 290 CCGTCTCTCCTCGAAGGT-TGTATTCACGCGCAAGAGTTC-TTTC-AAGCACGACCCAGT 346
Query 237 GATTTCCTCGTCTGTAGCTACCCAAAAACCGGTACGACTTGGCTCAAAGCACTTACTTAC 296
|| ||||||||||||||||||||||| || || || |||||||||||||| || |||| |
Sbjct 347 GACTTCCTCGTCTGTAGCTACCCAAAGACAGGCACCACTTGGCTCAAAGCCCTGACTTTC 406
Query 297 GCAATCGTC-AATCGTTCTCG-TTACGACGACGCCACAAACCCACTCCTCAAACGAAACC 354
|| |||| | |||||||| || || ||| || || | ||||| ||||| ||||| ||||
Sbjct 407 GCCATCG-CAAATCGTTCCCGCTT-CGATGATTCCTCCAACCCTCTCCTGAAACGTAACC 464
Query 355 CTCACGAGTTCGTCCCTTACGTTGAGATCGATTTCGCGTTT-TACCC-GACCGTTGATGT 412
|||||||||| || |||||| ||||||| |||||| | ||| | ||| || ||||||||
Sbjct 465 CTCACGAGTTTGTTCCTTACATTGAGATAGATTTC-CCTTTCTTCCCTGA-AGTTGATGT 522
Query 413 TCTTC-AAGACAGAA-AGAACCCACT-TTTCTCCACCCATATCCCA-AGCGGGTTATTAC 468
|| || |||||| || |||| | || ||| || || ||||||||| | || ||||||||
Sbjct 523 TC-TCAAAGACA-AAGGGAACACTCTGTTT-TCGACTCATATCCCATA-CGAGTTATTAC 578
Query 469 CCGATTCGATTGTGAACTCGGGTTGTAAGATGGTGTACATATGGAGAGACCCGAAA-GAT 527
| |||||| ||||||| || |||||||||||||| |||||||||||||| || ||| ||
Sbjct 579 CTGATTCGGTTGTGAAATCCGGTTGTAAGATGGTTTACATATGGAGAGAACC-AAAGGAC 637
Query 528 ACTTTCATCTCCATGTGGACTTT-CTTACACAAGGAGAAGTCTCA-AG-AAGG-TCAATT 583
||||||||||||||||||||||| ||| |||||||| ||| || || || | |
Sbjct 638 ACTTTCATCTCCATGTGGACTTTCCTT-CACAAGGA-AAG-GACAGAGCTTGGACCTGTC 694
Query 584 AGCGAGTCTTGAGGAGAGC-TTTGATATGTTTTGTAAAGGTTTATCTGTGTACGGTCCTT 642
||| | |||||||||| | ||||||||||| ||| ||| | |||| ||| |||||||
Sbjct 695 AGC-AATCTTGAGGAG-TCTTTTGATATGTTCTGTCGTGGTCTGTCTGGGTATGGTCCTT 752
Query 643 ATCTGGATCATGTGTTAGG-TTATTGGAAGGCTTATCAAGAGAATCCAGATAGGATTTTG 701
|||| ||||| | | || |||||||| || || |||||||||||||||||||| |||
Sbjct 753 ATCTTAATCATATCCT-GGCGTATTGGAAAGCATACCAAGAGAATCCAGATAGGATCTTG 811
Query 702 TTCCTTAGGTATGAGACTATGAGAGCTAATCCTTTGCCTTTTGTGAAGAGAT-TGGCTGA 760
||||| | ||| ||||| ||||||||| ||||||| || | |||||||| | |||||||
Sbjct 812 TTCCTCAAGTACGAGACGATGAGAGCTGATCCTTTACCGTACGTGAAGAG-TCTGGCTGA 870
Query 761 GTTCATGGGTTATGGATTCACGGATGAGGAAGAGGAGAAAGGTGTTGCTGAGAAAGTGGT 820
||| |||||| |||||||||| | |||||||||||||||||||||| ||||||||||||
Sbjct 871 GTTTATGGGTCATGGATTCACAGCCGAGGAAGAGGAGAAAGGTGTTGTTGAGAAAGTGGT 930
Query 821 GAAGCTTTGTAGCTTTGAGACGTTGAAGAATCTTGAAGCTAACAAAGGAGATAAAGAAAG 880
||| ||||| ||||| |||||||||||||||||||||||||||||||| || ||||| ||
Sbjct 931 GAATCTTTGCAGCTTCGAGACGTTGAAGAATCTTGAAGCTAACAAAGGGGAGAAAGACAG 990
Query 881 AGAGGATCGTCCTGCTGTTTATGCGAATAGCGCGTATTTTAGGAAAGGAAAGGTTGGAGA 940
|||||||||||||| |||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct 991 AGAGGATCGTCCTGGTGTTTACGCGAATAGCGCGTATTTCAGGAAAGGAAAGGTGGGAGA 1050
Query 941 TTGGGCTAATTATCTGACTCCGGAGATGGCTGCTCGTATTGATGGTTTAGTGGAGGAAAA 1000
|||| | || ||||||||||||||||||||||||||||| ||||| ||| |||| || ||
Sbjct 1051 TTGGTCGAACTATCTGACTCCGGAGATGGCTGCTCGTATAGATGGGTTAATGGAAGAGAA 1110
Query 1001 ATTCAAAGATACTGGCTTGCTTCAACATGATAACTGAATG 1040
||| || | || ||||||||| |||||| ||| ||||||
Sbjct 1111 ATTTAAGGGCACCGGCTTGCTTGAACATGGTAAATGAATG 1150
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51841639704
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5