BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926848
Length=1812
Score E
Sequences producing significant alignments: (Bits) Value
AT1G74690.1 | Symbols: IQD31 | IQ-domain 31 | chr1:28061159-280... 2789 0.0
AT1G18840.1 | Symbols: IQD30 | IQ-domain 30 | chr1:6500848-6504... 494 2e-138
> AT1G74690.1 | Symbols: IQD31 | IQ-domain 31 | chr1:28061159-28064625
REVERSE LENGTH=2275
Length=2275
Score = 2789 bits (1510), Expect = 0.0
Identities = 1716/1814 (95%), Gaps = 20/1814 (1%)
Strand=Plus/Plus
Query 4 TGTTTTAGTTCCATACATTATGGGGAAGTCTACAAAGTGGTTGAAGAATGTATTGCTTGG 63
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 154 TGTTTTAGTTCTATACATTATGGGGAAGTCTACAAAATGGTTGAAGAATGTATTGCTTGG 213
Query 64 aaaaaaaaCTTCTAAATCTAGTGGTTCCAAAGGA-AAAGAGAGAGTTGTGAGTGGAAATG 122
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct 214 GAAAAAAACTTCTAAATCTAGTGGTTCCAAA-GACAAAGAGAGAGTTGTGAGTGGAAAAG 272
Query 123 AGGTACTGGTTACTTCAAAGGTAGAAGAATCAGATGTGGTATCAGATCTTCAATCTTTCG 182
|||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |
Sbjct 273 AGGTACTGGTTACTTCAAAGGTGGAAGAATCAGATGTGGTATCAGATCTTCCATCTTTTG 332
Query 183 CAGTTGCAGAGACCAATACAGTTGATAGAAGCAGTGGTATGTTAGAGACGCAAAATGTA- 241
|||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||
Sbjct 333 AAGTTGCAGAGACCAATACCGTTGATAGAAGTGGTGGTATGTTAGAGACTCAAAATGTAG 392
Query 242 GAGCCTGAAGAGATCTCAGATGATGAAATTGAGCTTCCTGAGGGAAAACCAACAGATTCT 301
|| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 393 GA-CCTGAAGAGATCTCAGATGATGAAATTGAGCTTCCTGAAGGAAAATCAACAGATTCT 451
Query 302 CAGAATGTTGCACCTGTTCAAGATAATTCAGTATGTGATGCAGAGAGAATCCAACAAGAG 361
|||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||
Sbjct 452 CAGAATGTTGCACCTGTTCAAGATCATTCATTATCTGATGCAGAGAGAATCCAACGAGAG 511
Query 362 ATTGCAGCAACGTCTGTGCAGGCTGCGTTTAGAGGTTACTTGGCTCGGCGTGCTTTTTGG 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 512 ATTGCAGCAACGTCTGTGCAGGCTGCGTTTAGAGGTTACTTGGCTCGGCGTGCTTTTTGG 571
Query 422 GCACTCAAAGGCATAATAAGGCTACAAGCACTTATCCGTGGTCACCTGGTTAGGAGACAA 481
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 572 GCACTCAAAGGCATAATAAGGCTACAAGCGCTTATCCGTGGTCACCTTGTTAGGAGACAA 631
Query 482 GCTGTTGCAACTCTTTTCTCTATCATGGGAATTGTCAGGTTGCAAGCATTTGCTCGAGGA 541
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 632 GCTGTTGCAACTCTTTTCTCTGTCATGGGAATTGTCAGGTTGCAAGCATTTGCTCGAGGA 691
Query 542 AGAGAGATCAGGAAGTCTGATATTGGAGTTCAAGTTTATAGGAAATGCAGATTGCCGCTG 601
||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||
Sbjct 692 AGAGAGATCAGGAAGTCCGACATTGGAGTTCAAGTTTATAGGAAATGCAGATTGCAGCTA 751
Query 602 CTTCAGGGGAGCAAGCTTGCAAATCCTACAGATGCTTACCTTGGAATCAAGAAACTAACA 661
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 CTTCAGGGGAACAAGCTTGCAAATCCTACAGATGCTTACCTTGGAATCAAGAAACTAACA 811
Query 662 GCCAATGCTTTTGCTCTGAAGCTTCTCGCTTCATCACCAAAAGTGCTACCTGTACACGCC 721
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 GCCAATGCTTTTGCTCAGAAGCTTCTCGCTTCATCACCAAAAGTGCTACCTGTACACGCA 871
Query 722 TATGATTCATCCGATCCAGACTCAAACTTGATTTGGTTAGAGAACTGGTCAGCCTCATGC 781
|||||| ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct 872 TATGATACATCCAATCCAAACTCAAACTTGATCTGGTTAGAGAACTGGTCAGCCTCATGC 931
Query 782 TTCTGGAAACCAGTTCCTCAACCGAAGAAAACGATAAGCAGAAAACCTCAGAACAAGCTT 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 932 TTCTGGAAACCAGTTCCTCAACCGAAGAAAACGATAAGCAGAAAACCTCAGAACAGGCTT 991
Query 842 TTAGTCGAGGCTGAATCTGCTAAACCCAAGAAGAGTGTCCGTAAAGCTCCTGCTGCAAAC 901
|||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 992 TTAGTCGAGGCTGAGTCTGCTAAACCCAAGAAGAGTGTCCGTAAAGTTCCTGCTTCAAAC 1051
Query 902 TTTGAAAGTTCCTCAGTACAGACATCTTTTGAGTTTGAGAAACCCAAACGCAGTTTCCGG 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 TTTGAAAGTTCCTCAGTACAGACATCTTTTGAGTTTGAGAAACCCAAACGCAGTTTCCGG 1111
Query 962 AAAGTTTCAAGCCAGTCAATAGAGCCACCTGCTGTCGAAGATCCTCAGATTGAACTTGAA 1021
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1112 AAAGTTTCAAGCCAGTCGATAGAGCCACCCGCTGTCGAAGATCCTCAGATTGAACTTGAA 1171
Query 1022 AAAGTTAAACGTAGCTTGAGGAAGGTACATAATCCTGTAGTTGAAAGCTCTATCCAACCT 1081
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1172 AAGGTTAAACGTAGCTTGAGGAAGGTACATAATCCTGTAGTTGAGAGCTCTATCCAACCT 1231
Query 1082 CAACGATCCCCTCGTAAGGAAGTCGAGAAGCCAAAGCTTGGCGTAGTA-AAGACAATGGA 1140
|||||||||||||||||||||||||||||||||||||||||||| | | ||||||| |||
Sbjct 1232 CAACGATCCCCTCGTAAGGAAGTCGAGAAGCCAAAGCTTGGCGTTG-AGAAGACAAGGGA 1290
Query 1141 ATCATCATATCCGATGGTCCATGAAACTGCAGAAGAACCTGTGAATGTTTGTGACGAAAA 1200
||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1291 ATCATCATATCCGCTGGTTCATGAAACTGCAGAAGAACCTGTGAATGTTTGTGATGAAAA 1350
Query 1201 GAAAAAGCAAGAAA-TGCCTGAACAGCCTAAGGAGGAGGTACATGTTCTTGAGATGGAAG 1259
|||||||||||||| | || ||||||||| ||||||||||||||| ||||||||||||||
Sbjct 1351 GAAAAAGCAAGAAATTTCC-GAACAGCCTGAGGAGGAGGTACATGCTCTTGAGATGGAAG 1409
Query 1260 TACATACTCTTGGACCATTAGAAACCAATGAAGCACTTGACTCCTCACTGGTAAACCATA 1319
||||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||| |
Sbjct 1410 TACATACTCCTGGACCATTAGAAACTAATGAAGCACTTGATTCCTCACTGGTCAACCAAA 1469
Query 1320 TCGACAGCAACGAAAAAGCAATAGTTGAGGAAAAACCCTCAATGGAAAAGGATACCAAAG 1379
| |||||||| |||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1470 TTGACAGCAATGAAAAAGCCATGGTTGAGGAAAAACCCTCAATGGAAAAGGATACCAAAG 1529
Query 1380 AAGAAAAGACTCCCAAACCAAACAATAAAGAGAATTCCGCTGGGAAGGAGAACCAGAAAC 1439
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1530 AAGAAAAGACTCCCAAACCAAACAATAAAGAGAATTCCGCTGGGAAGGAGAACCAGAAA- 1588
Query 1440 TC-AGGAAAAAGGGTTCAGCTATTAGCAAGACCGAGCGTGAAGAGAGTAATGGGCATCAT 1498
|| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 1589 TCCAGGAAAAAGGGTTCAGCTACTAGCAAGACTGAGCGTGAAGAGAGTAATGGGCATCA- 1647
Query 1499 C-AGACTAGCCCATCAATCCCAAGCTATATGCAAGCAACTAAATCGGCCAAAGCAAAGCT 1557
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1648 CGAGACTAGCCCATCAATCCCAAGCTATATGCAAGCAACTAAATCGGCGAAAGCAAAGCT 1707
Query 1558 GAGGATGCAAGGCTCACCAAAGTCTGCTGAGCCAGATGGGACTGAGAAAGCCAGTGTTCC 1617
||| | |||||||||||||||||||| |||| |||||| ||||||||||||| ||||||
Sbjct 1708 AAGGCTTCAAGGCTCACCAAAGTCTGCGGAGCAAGATGGAACTGAGAAAGCCACTGTTCC 1767
Query 1618 CAGGCGTCACTCTCTACCATCTCCAGGTAATGGCATTGGCAGGATCACCTCTCAATCTCC 1677
||| ||||||||||||||||||||||||||||| | |||||||| ||||| |||||
Sbjct 1768 CAGACGTCACTCTCTACCATCTCCAGGTAATGG--T----AGGATCACTTCTCACTCTCC 1821
Query 1678 AAGAACAACGAGACTCGCAAACTCAGGTGACAAAACCAGGAATAAGAAGGAGAAACCTCT 1737
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1822 AAGAACAACGAGACTCGCAAACTCAGGTGACAAAACCGGGAATAAGAAGGAGAAACCTCT 1881
Query 1738 TCTCTCGTCCCAAGAAGGAAATGCCAAGACAACCCC-GACAGAGCGGAAGAGGTGATTGA 1796
||| ||||||| ||||||||| ||||||||||| || | ||||||||||||||||||||
Sbjct 1882 TCTGTCGTCCCGAGAAGGAAACGCCAAGACAACTCCAG-CAGAGCGGAAGAGGTGATTGG 1940
Query 1797 TTCCTGCAGAAAGT 1810
|||| || ||||||
Sbjct 1941 TTCCAGCGGAAAGT 1954
> AT1G18840.1 | Symbols: IQD30 | IQ-domain 30 | chr1:6500848-6504413
REVERSE LENGTH=2360
Length=2360
Score = 494 bits (267), Expect = 2e-138
Identities = 858/1127 (76%), Gaps = 106/1127 (9%)
Strand=Plus/Plus
Query 18 ACATTATGGGGAAGTCTACAAAGTGGTTGAAGAA-TGTATTGCTTGGaaaaaaaaCTTCT 76
|||| ||||| ||| || ||| |||||| || || |||| | |||||||| ||| | |||
Sbjct 417 ACATAATGGGAAAGCCTGCAAGGTGGTT-AAAAAGTGTACTACTTGGAAAGAAACCATCT 475
Query 77 AAATCTAGTGGTTCCAAAGGA-AAAGAGAGAGTTGTGAGTGGAAATGAGGTACTGGTTAC 135
|||||||||||||| ||| || || |||||| |||||| |||||| || ||| ||||||
Sbjct 476 AAATCTAGTGGTTCTAAA-GATAAGGAGAGAATTGTGAATGGAAAAGAAGTAGTGGTTA- 533
Query 136 T-TCAAAGGTAGAAGAATCAGATGTGGTATCAGATC-TTCAATC-TTTCGCAGTTGCAGA 192
| |||||| | |||||||| ||||| || || |||| ||| ||| || | | ||| |
Sbjct 534 TATCAAAGATTGAAGAATCCGATGTTGTTTCGGATCTTTC-ATCAATT-GGAAATGC--A 589
Query 193 GACCAATACAGTTGATAGAAGCAGTGGTA-TGTTAGAGACGCAAAATGTAGAGCCTGAAG 251
| || | | | || | |||||||| || |||||||||| ||| || | | |||||
Sbjct 590 G--CAGT-C---T-AT---ACCAGTGGTATTG-TAGAGACGCAGAATCTAAAACATGAAG 638
Query 252 A-GATCTCAGATGATGAAAT-TGAGCTTCCTGAGGGAAAACCAACAGATTCTC-AGAATG 308
| | | || || || || || || || |||||| ||||||||||||||| || |||
Sbjct 639 ATG-TTTCGGACGACGAGATACAAG-TTTCTGAGGTCCAACCAACAGATTCTCAAG-ATG 695
Query 309 TTGCACCTGTTCAAGATAATTCAG-TATGTG-ATGCAGAGAGAATCCAACAAGAGATTGC 366
|||| |||||| ||| |||| | ||| | || |||||| ||| ||||||||||| ||
Sbjct 696 TTGCTTCTGTTCCTGATGATTC-GCTATCCGAAT-CAGAGAAAATTCAACAAGAGATCGC 753
Query 367 AGCAACG-T-CTGTGCAGGCTGCGTTTAGAGGTTACTTGGCTCGGCGTGCTTTTTGGGCA 424
||| | | | | ||||||||||||| |||||| |||||||| || |||||||| | |
Sbjct 754 AGC-A-GTTACCGTGCAGGCTGCGTATAGAGGATACTTGGCACGACGTGCTTTCAAGATA 811
Query 425 CTCAAAGGCATAATAAGGCTACAAGCACTTATCCGTGGTCACCTGGTTAGGAGACAAGCT 484
| ||||| ||||||||||||||||||||||||||||||||| ||||||| || ||||||
Sbjct 812 TTAAAAGGTATAATAAGGCTACAAGCACTTATCCGTGGTCACATGGTTAGAAGGCAAGCT 871
Query 485 GTTGCAACTCTTTTCTCTATCATGGGAATTGTCAGGTTGCAAGCATTTGCTCGAGGAAGA 544
||| | ||||| | || | | |||||||||||||| ||||||||| ||||||| || |||
Sbjct 872 GTTTCGACTCTGTGCTGTGTTATGGGAATTGTCAGATTGCAAGCACTTGCTCGTGGGAGA 931
Query 545 GAGATCAGGA-AGTCTGATATTGGAGTTCAAGTTTATAGGAAATG-CAGATTGCCGC-T- 600
|||||||| | | || || ||||||||| ||||| | |||||||| || |||| | |
Sbjct 932 GAGATCAG-ACATTCAGACATTGGAGTTGAAGTTCAGAGGAAATGTCAT-TTGCATCATC 989
Query 601 -GC-TTCAGGGGAGCAAGCT---T-GCAAATCC-TACAGATGCTTACCTTGG-AATCAAG 652
|| || || | | |||| | | | |||| || ||||| |||| ||||||
Sbjct 990 AGCCTTTAGAGAATAAAGCCAACTCGGTTGTTGATACACATTCTTAC-TTGGGAATCAAT 1048
Query 653 AAACTAACAGCCAATGCTTTTGCTCTGAAGCTTCTCGCTTCATCACCAAAAGTGCTACCT 712
|| ||||||| ||||||||||||| ||||||||| |||||||| ||||| ||||| |||
Sbjct 1049 AAGCTAACAGGAAATGCTTTTGCTCAGAAGCTTCTAGCTTCATCGCCAAACGTGCTGCCT 1108
Query 713 --GTACA-CGCCTATGATTCATCCGATCCAGACTCAAACTTGATTTGGTTAGAGAACTGG 769
|| | || | ||||||| | |||| | |||| || | | ||||||||||||
Sbjct 1109 TTGTCCCTCGACAATGATTC-T----TCCA-ATTCAATCT-G----G-TTAGAGAACTGG 1156
Query 770 TCAGCCTCATGCTTCTGGAAACCAGTTCCTCAACCGAAGAAAACGATAAG-CAGAAAACC 828
||||| || ||||||||||||||||||||||| || |||||| | || | ||||||| |
Sbjct 1157 TCAGCATCTTGCTTCTGGAAACCAGTTCCTCAGCCAAAGAAAGC-ATCACTCAGAAAATC 1215
Query 829 TCAGAACAAG----C---T--T--T----TAGTCGAGGCTGAATCTGCTAAACCCAAGAA 873
|||||| ||| | | | | ||||||||||||| | ||| | ||| |||||
Sbjct 1216 TCAGAAGAAGTTTGCCAGTAATCCTCAGATAGTCGAGGCTGAGTTTGCGAGACCAAAGAA 1275
Query 874 GAGTGTCCGTAAAGCTCC-TGCTGCAAA-CTTTGA-AAGTTCCTCAGT---ACAGACATC 927
|||||| || |||| ||| | || |||| || || || |||||| || ||| |||||
Sbjct 1276 GAGTGTTCGCAAAG-TCCCTTCTTCAAATCTC-GACAA-TTCCTCGGTGGCACAAACATC 1332
Query 928 TTTTGAGTTTGAGAAACCCAAACGCAGTTTCCGGAAAGTTTCAA---GCCAGTCAATAGA 984
| |||| ||||||||||||||||||| ||||| || ||||||| |||| || ||||
Sbjct 1333 ATCTGAGCTTGAGAAACCCAAACGCAGCTTCCGCAAGGTTTCAACAAGCCAATCTGTAGA 1392
Query 985 GCCAC--CTG-CTGTCGA-AGATCCTCA-GATTGAACTTGAAAAAGTTAAACGTAGCTTG 1039
|||| | | || | || | ||||||| | |||| || || ||||| |||||| |||||
Sbjct 1393 ACCACTACCGTCTATGGACA-ATCCTCAAG-TTGATCTAGAGAAAGTGAAACGTGGCTTG 1450
Query 1040 AGGAAGGTACATAATCCTGTAGTTGA-AAGCTCTATCCAACCTCAAC 1085
|| || ||||||||||| |||||||| || |||||||||||||||||
Sbjct 1451 AGAAAAGTACATAATCCCGTAGTTGAGAA-CTCTATCCAACCTCAAC 1496
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89658173370
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5