BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926872
Length=1591
Score E
Sequences producing significant alignments: (Bits) Value
AT1G74920.1 | Symbols: ALDH10A8 | aldehyde dehydrogenase 10A8 |... 2673 0.0
AT3G48170.1 | Symbols: ALDH10A9 | aldehyde dehydrogenase 10A9 |... 826 0.0
> AT1G74920.1 | Symbols: ALDH10A8 | aldehyde dehydrogenase 10A8
| chr1:28139009-28142744 REVERSE LENGTH=1843
Length=1843
Score = 2673 bits (1447), Expect = 0.0
Identities = 1535/1579 (97%), Gaps = 0/1579 (0%)
Strand=Plus/Plus
Query 1 ACGAATCCACGATCCAGTGAGGAGCAGCAACTCCATCTCCGGAGCTCTAGATTCAGATAA 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 107 ACGAATCCACGATCCAGTGAGCAGCAGCAACTCCATCTCCGGAGCTCTAGATTCAGATAA 166
Query 61 GAACAATGGCGATTCCGATGCCTACTCGCCAGCTATTCATCGACGGCGAATGGAGAGAAC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 GAACAATGGCGATTCCGATGCCTACTCGCCAGCTATTCATCGACGGCGAATGGAGAGAAC 226
Query 121 CCATCTTGAAGAAGCGAATCCCGATCGTGAATCCGGCTACTGAAGAGGTCATTGGTGATA 180
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 227 CCATCTTGAAGAAGCGAATCCCGATCGTTAATCCAGCTACTGAAGAGGTCATTGGTGATA 286
Query 181 TTCCTGCAGCTACAACGGAGGACGTGGAGGTTGCAGTCAACGCTGCTCGAAGAGCATTTT 240
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct 287 TTCCTGCAGCTACAACGGAGGACGTGGATGTTGCTGTCAACGCTGCTCGAAGAGCATTAT 346
Query 241 CAAGGAATAAAGGGAAAGATTGGGCCAAAGCACCTGGAGCTGTTCGTGCTAAGTTTTTAC 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 347 CAAGGAATAAAGGGAAAGATTGGGCCAAAGCACCTGGAGCTGTTCGTGCTAAGTATTTAC 406
Query 301 GTGCTATTGCTGCTAAGGTAAATGAAAGAAAGACGGATCTGGCAAAGCTCGAGGCGCTTG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 GTGCTATTGCTGCTAAGGTAAATGAAAGAAAGACGGATCTGGCAAAGCTCGAGGCGCTTG 466
Query 361 ATTGTGGTAAACCATTGGATGAAGCAGTGTGGGATATGGATGATGTTGCTGGATGTTTTG 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 467 ATTGTGGTAAACCATTGGATGAAGCAGTATGGGATATGGATGATGTTGCTGGATGTTTTG 526
Query 421 AATTTTATGCTGACCTTGCTGAAGGATTAGATGCTAAGCAGAAAGCACCAGTCTCGCTTC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 527 AATTTTATGCTGACCTTGCTGAAGGATTAGATGCTAAGCAGAAAGCACCAGTCTCGCTTC 586
Query 481 CCATGGAGAGTTTTAAGAGTTTTGTTCTGAAGCAACCTCTTGGAGTTGTGGGACTTATTA 540
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 587 CCATGGAGAGTTTTAAGAGTTATGTTCTGAAGCAACCTCTCGGAGTTGTGGGACTTATTA 646
Query 541 CACCATGGAATTACCCCCTTTTGATGGCTGTTTGGAAGGTGGCTCCTTCACTTGCTGCAG 600
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 647 CACCATGGAATTACCCCCTTTTGATGGCTGTTTGGAAGGTGGCTCCTTCCCTTGCTGCAG 706
Query 601 GGTGCACTGCGGTTCTCAAGCCATCAGAGCTGGCATCTGTTACTTGTTTGGAGCTTGCTG 660
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 707 GGTGCACTGCGATTCTCAAGCCATCAGAGCTGGCATCAGTTACTTGTTTGGAGCTTGCTG 766
Query 661 ATATTTGTCGAGAAGTTGGTCTTCCTCCTGGGGTCCTCAATGTTTTGACTGGTTTAGGTT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 767 ATATTTGTCGAGAAGTTGGTCTTCCTCCTGGGGTCCTCAATGTTTTGACTGGTTTCGGTT 826
Query 721 CGGAAGCTGGTGCTTCTTTGGCATCACACCCCGGAGTGGACAAGATTGCATTTACTGGAA 780
|||||||||||||| ||||||||||||| || || |||||||||||||||||||||||||
Sbjct 827 CGGAAGCTGGTGCTCCTTTGGCATCACATCCTGGCGTGGACAAGATTGCATTTACTGGAA 886
Query 781 GTTTTGCCACAGGAAGTAAGGTCATGACAGCTGCTGCTCAGTTGGTGAAGCCTGTTTCTA 840
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 887 GTTTCGCCACAGGAAGTAAGGTCATGACAGCCGCTGCTCAGTTGGTGAAGCCTGTTTCTA 946
Query 841 TGGAACTTGGTGGGAAGAGCCCTCTCATTGTGTTTGATGACGTTGATCTTGATAAAGCTG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 947 TGGAACTTGGTGGGAAGAGCCCTCTCATTGTGTTTGATGACGTTGATCTTGATAAAGCTG 1006
Query 901 CTGAATGGGCTCTCTTCGGTTGCTTCTGGACAAATGGTCAGATCTGCAGTGCAACTTCCC 960
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1007 CTGAATGGGCTCTTTTCGGTTGCTTCTGGACAAATGGTCAAATCTGCAGTGCAACTTCCC 1066
Query 961 GTCTTCTTGTTCATGAAAGCATCGCATCTGAATTTATAGAAAAGCTTGTAAAGTGGAGTA 1020
| ||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||| |
Sbjct 1067 GCCTTCTTGTTCACGAAAGCATCGCATCTGAGTTCATAGAGAAGCTTGTAAAATGGAGCA 1126
Query 1021 AGAACATTAAAATTTCAGACCCCATGGAAGAAGGATGCAGGCTTGGTCCTGTCGTGAGCC 1080
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1127 AGAACATTAAAATTTCAGACCCCATGGAAGAAGGATGCAGGCTTGGTCCTGTAGTTAGCA 1186
Query 1081 AAGGACAGTACGAGAAGATATTGAAGTTTATCTCAGCAGCTAAGAGTGAAGGAGCAACGA 1140
||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct 1187 AAGGACAGTACGAGAAGATATTGAAGTTTATCTCAACGGCCAAGAGTGAAGGAGCAACGA 1246
Query 1141 TCTTGCATGGTGGTTCTCGACCTGAGCATCTTGAAAAGGGCTTCTTCATTGAACCAACCA 1200
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1247 TCTTGCATGGTGGTTCCCGACCTGAGCATCTGGAAAAGGGCTTCTTCATTGAACCAACCA 1306
Query 1201 TCATAACTGATGTAACCACTTCAATGCAAATCTGGAGAGAAGAAGTTTTTGGGCCTGTTC 1260
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1307 TCATAACTGATGTAACCACTTCAATGCAAATATGGAGAGAAGAAGTTTTCGGGCCTGTTC 1366
Query 1261 TTTGCGTGAAAACATTTGCCAGTGAGGACGAGGCAATTGAGCTAGCAAATGACTCCCATT 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1367 TTTGCGTGAAAACATTTGCCAGTGAGGACGAGGCAATTGAGCTAGCAAATGACTCTCATT 1426
Query 1321 ACGGACTAGGAGCTGCAGTGATATCTAATGACACAGAAAGATGTGACCGTGTAAGCGAGG 1380
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1427 ACGGACTAGGAGCTGCAGTGATATCTAATGACACAGAAAGATGTGACCGTATAAGCGAGG 1486
Query 1381 CCTTTGAAGCTGGGATTGTCTGGATTAACTGCTCGCAGCCTTGCTTTACCCAAGCCCCAT 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1487 CCTTTGAAGCTGGGATTGTCTGGATTAACTGCTCGCAGCCTTGCTTTACCCAAGCCCCAT 1546
Query 1441 GGGGTGGTGTAAAACGCAGTGGGTTTGGACGAGAACTTGGAGAATGGGGACTTGATAACT 1500
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1547 GGGGTGGTGTCAAACGCAGTGGGTTTGGACGAGAACTTGGAGAATGGGGACTTGATAACT 1606
Query 1501 ACTTGAGTGTGAAGCAAGTGACTCTCTACACTTCAAACGATCCATGGGGATGGTACAAAT 1560
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1607 ACTTGAGTGTGAAGCAAGTGACTCTCTACACTTCAAACGATCCCTGGGGATGGTACAAAT 1666
Query 1561 CCCCCAACTAAGTAATGAA 1579
| |||||||||||||||||
Sbjct 1667 CTCCCAACTAAGTAATGAA 1685
> AT3G48170.1 | Symbols: ALDH10A9 | aldehyde dehydrogenase 10A9
| chr3:17786140-17790008 REVERSE LENGTH=1752
Length=1752
Score = 826 bits (447), Expect = 0.0
Identities = 1121/1442 (78%), Gaps = 64/1442 (4%)
Strand=Plus/Plus
Query 150 AATCCGGCTACTGAAGAGGTCATTGGTGATATTCCTGCAGCTACAACGGAGGACGTGGAG 209
||||| || || ||||| |||| ||| ||||||| || || || | || || ||||||
Sbjct 175 AATCCCGCCACCGAAGACATCATCGGTTATATTCCAGCTGCAACTTCTGAAGATGTGGAG 234
Query 210 GTTGCAGT-CAACGCTGCT-CGAAGAGCATTTTCAAGGAATAAAGGGAAA-GATTGGGCC 266
|||| || || |||||| ||| ||||||| | ||||| || ||||| ||||||||
Sbjct 235 CTTGCTGTGGAA-GCTGCTAGGAA-AGCATTTACTAGGAA-CAACGGAAAGGATTGGGCT 291
Query 267 AAAGCACCTGGAGCTGTTCGTGCTAAGTTTTTACGTGCTATTGCTGCTAAGGTAAAT-GA 325
| |||| |||| ||||||||||| || | || || |||||||| |||||||| ||| ||
Sbjct 292 AGAGCAACTGGTGCTGTTCGTGCCAAATACTTGCGCGCTATTGCAGCTAAGGT-AATAGA 350
Query 326 AAGAAAGACGGATCTGGCAAAGCTCGAGGCGCTTGATTGTGGTAAACCAT-TGGATGAAG 384
|| ||| | || || || || || ||||| ||||||| |||||||| | | |||||||
Sbjct 351 GAGGAAGTCTGAACTAGCTAATCTTGAGGCTATTGATTGCGGTAAACC-TCTAGATGAAG 409
Query 385 CAGTGTGGGATATGGATGATGTTGCTGGATGTTTTGAATTTTATGCTGACCTTGCTGAAG 444
||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 410 CAGCATGGGACATGGATGATGTTGCTGGATGTTTTGAATATTATGCTGACCTAGCTGAAG 469
Query 445 GATTAGATGCTAAGCAGAA-AGCACCAGTCTCGCTTCCCATGGAGAGTTTTAAGAGTTTT 503
| || ||||| |||||||| | | || | || ||||| ||||| | ||||||| ||| |
Sbjct 470 GCTTGGATGCAAAGCAGAAGA-CTCCTCTTTCTCTTCCGATGGATACTTTTAAGGGTTAT 528
Query 504 GTTCTGAAGCAACCTC-TTGGAGTTGTGGGACTT-ATTACACCATGGAATTACCCCCTT- 560
|||| ||| |||| | |||| || || || | | ||||| |||||||| || || ||
Sbjct 529 ATTCTCAAGGAACC-CATTGGCGTAGTTGG-CATGATTACTCCATGGAACTATCCG-TTA 585
Query 561 TTGATGGCTGTTTGGAAGGTGGCTCCTTCACTTGCTGCAGGGTGCACTGCGGTTCTCAAG 620
||||||||||| ||||| || ||||||||||||||||| |||||||| || | || ||
Sbjct 586 TTGATGGCTGTCTGGAAAGTCGCTCCTTCACTTGCTGCTGGGTGCACGGCTATACTGAAA 645
Query 621 CCATCAGAGCTGGCATCTGTTACTTGTTTGGAGCTTGCTGATATTTGTCGAGAAGTTGGT 680
|| |||||| |||| || | || ||||||||||| ||||||||||| || || || |||
Sbjct 646 CCTTCAGAGTTGGCCTCCCTGACATGTTTGGAGCTCGCTGATATTTGCCGCGAGGTGGGT 705
Query 681 CTTCCTCCTGGGGTCCTCAATGTTTTGACTGGTTTAGGTTCGGAAGCTGGTGCTTCTTTG 740
|| || ||||| || || ||| || ||||||||||||| | ||||| |||||| | ||
Sbjct 706 CTACCACCTGGTGTTCTTAATATTCTGACTGGTTTAGGAACTGAAGCAGGTGCTCCACTG 765
Query 741 GCATCACACCC-CGGAGTGGACAAGATTGCATTTACTGGAAGTTTTGCCACAGGAAGTAA 799
||||| || || | || |||||||||| ||| |||||||| | || ||||| |
Sbjct 766 GCATCGCATCCACAT-GTTGACAAGATTGTATTCACTGGAAGCACAACAACTGGAAGCA- 823
Query 800 GG-TCATGACAGCTGCTGCTCAG-TTGGTGAAGCCTGTTTC-TATGGAACTTGGTGGG-A 855
| | ||||| | ||||| || |||||||| || ||||| | |||| ||||| ||| |
Sbjct 824 GCATTATGACTTCCGCTGC-CAAATTGGTGAAACCAGTTTCCT-TGGAGCTTGG-GGGTA 880
Query 856 AGAGCCCTCTCATTGTGTTTGATGACGTTGATCTTGATAAAGCTGCTG-AATGGGCTCTC 914
| |||||| ||||||| |||||||| || ||| |||||||||||| || ||||| || |
Sbjct 881 AAAGCCCTATCATTGTCTTTGATGATGTCGATATTGATAAAGCTG-TGGAATGGACTATG 939
Query 915 TTCGGTTGCTTCTGGACAAATGGTCAGATCTGCAGTGCAACTTCCCGTCTTCTTGTTCAT 974
|| ||||| |||||||| ||||| ||||| || ||||| || || || |||||||| |||
Sbjct 940 TTTGGTTGTTTCTGGACGAATGGGCAGATTTGTAGTGCCACATCTCGACTTCTTGTGCAT 999
Query 975 GAAAGCATCGC--ATCTGAATTTATAGAAAAGCTTGTAAAGTGGAGTAAGAACATTAAAA 1032
||||| || || | | || ||| | || ||||| |||||||||| ||||||||||| |
Sbjct 1000 GAAAGGATTGCTGA-C-GAGTTTTTGGACAAGCTGGTAAAGTGGACCAAGAACATTAAGA 1057
Query 1033 TTTCAGACCCCATGGAAGAAGGATGCAGGCTTGGTCCTGTCGTGAGCCAAGGACAGTACG 1092
||||||| || | |||||||| || |||||||||||||| || || ||||||||||||
Sbjct 1058 TTTCAGATCCTTTTGAAGAAGGCTGTAGGCTTGGTCCTGTTGTCAGTAAAGGACAGTACG 1117
Query 1093 AGA-AGATATTGAAGTTTATCTCAG-CAGCTAAGAGTGAAGGAGCAAC-GATCTT-GCAT 1148
||| || | | |||||| ||||| | |||| || |||||| ||||| | |||| | |
Sbjct 1118 AGAGAGTTCTA-AAGTTTGTCTCAAAC-GCTAGGAATGAAGGTGCAACTGTTCTTTG--T 1173
Query 1149 GGTGGT-TCTCGACCTGAGCATCTTGAA-AAGGGCTTCTTCATTGAACCAACCATCATAA 1206
|| || | ||| ||||||||| || || ||||| | ||| ||||||| | || |
Sbjct 1174 GGAGGAGT-TCGTCCTGAGCAT-TTAAAGAAGGGATACTTTGTTGAACCTGCGATTGTTT 1231
Query 1207 CTGATGTAACCACTTCAATGCAAATCTGGAGAGAAGAAGTTTTTGGGCCTGTTCTTTGCG 1266
| |||| || ||||||||| ||||||||||||| ||||| ||||| |||| ||| || |
Sbjct 1232 CAAATGTGACTACTTCAATGGAAATCTGGAGAGAGGAAGTCTTTGGTCCTGCTCTGTGTG 1291
Query 1267 TGAAAACATT-TGCCAGTGAGGACGAGGCAATTGAGCTAGCAAATGACTCCCATTACGGA 1325
|||||||||| | ||| ||||| ||||||||| |||| ||||||||||| || || |||
Sbjct 1292 TGAAAACATTCT-CCACCGAGGATGAGGCAATTCAGCTTGCAAATGACTCTCAATATGGA 1350
Query 1326 CTAGGAG-CTGCAGTGAT-ATCTAATGACACAGAAA-GATGTGACCGTGTAAGCGAGGCC 1382
||| || | ||||| || ||| ||||| | | | | ||||| ||||| || ||||
Sbjct 1351 TTAGCAGGC-GCAGT-ATTATCAAATGAT-CTGGAGCGGTGTGATCGTGTTAGTAAGGC- 1406
Query 1383 TTTGAAG-CTGGGATT-GTCTGGATTAACTGCTCGCAGCCTTGCTT-TACCCAAGCCCCA 1439
||| || | |||| | || ||| | |||||||| ||||| ||||| | || |||| |||
Sbjct 1407 TTTCCAGGC-GGGAATAGTGTGGGTCAACTGCTCTCAGCCATGCTTCTGCC-AAGCTCCA 1464
Query 1440 TGGGGTGGTGTAAAACGCAGTGGGTTTGGACGAGAACTTGG-AGAATGGGGACTTGATAA 1498
|||||||| ||||||||||| ||||| || ||| |||| ||||||||||||||| ||
Sbjct 1465 TGGGGTGGAACCAAACGCAGTGGATTTGGCCGTGAA-TTGGGAGAATGGGGACTTGAGAA 1523
Query 1499 CTACTTGAGTGTGAAGCAAGTGACTCTCTACA-CTTCAAACGATCCATGGGGATGGTACA 1557
|||||||||||||||||| ||||||| || | || | | || ||||||||||||||||
Sbjct 1524 CTACTTGAGTGTGAAGCAGGTGACTCAGTATATCT-CTGATGAACCATGGGGATGGTACA 1582
Query 1558 AA 1559
||
Sbjct 1583 AA 1584
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78563852925
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5