BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926900 Length=1993 Score E Sequences producing significant alignments: (Bits) Value AT1G75200.1 | Symbols: | flavodoxin family protein / radical S... 3201 0.0 > AT1G75200.1 | Symbols: | flavodoxin family protein / radical SAM domain-containing protein | chr1:28220626-28223709 REVERSE LENGTH=2279 Length=2279 Score = 3201 bits (1733), Expect = 0.0 Identities = 1887/1963 (96%), Gaps = 4/1963 (0%) Strand=Plus/Plus Query 4 AGTTCCAA-TCCTCCGTTATGTCAACGACTTCCTCCGTGCGTGCTCGACTAGCTTTCGTT 62 |||| ||| || ||||| ||||| ||||||||||||||||||| |||||||||||||||| Sbjct 96 AGTT-CAAGTCTTCCGTCATGTCTACGACTTCCTCCGTGCGTGTTCGACTAGCTTTCGTT 154 Query 63 GCTTTACTCTCAGCGACGACTTTTTACTGTATCCATAAATACCGCCGCTTGAAACGTCTG 122 || |||||||||||||||||||||||||||||||||||||| || |||||||||| |||| Sbjct 155 GCGTTACTCTCAGCGACGACTTTTTACTGTATCCATAAATATCGTCGCTTGAAACATCTG 214 Query 123 AAAAACCTCTCGTTAAACCCTAGCTCTACCTCGAAAGCCAGCAGAGGAAAGATCTTCTTC 182 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 215 AAAAACCTCTCGTTAAACCCTAGCTCTACATTGAAAGCCAGCAGAGGAAAGATCTTCTTC 274 Query 183 ATCTCCCAAACTGGTACAGCTAAAGCCTTAGCTCAACGGCTTTACGAGCTATGCGCATCT 242 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 275 ATCTCCCAAACTGGTACAGCTAAAGCCTTAGCTCAACGGCTTCACGAGCTATGCGCATCT 334 Query 243 AACGACATAGCATTTGATCTCGTCGATCCACGGAGCTACGAACCTGAAGATCTCCCTAAA 302 |||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||| Sbjct 335 AACGACATAGCATTTGATATCGTCGATCCACATAGCTACGAACCTGAAGATCTACCTAAA 394 Query 303 GAAACCCTAGTTTTATTCATCGCGTCGACTTGGGATGGCGGGAAACCGCCTAAGAACGGA 362 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 395 GAAACCCTAGTTTTATTCATCGCGTCGACTTGGGATGGCGGGAAGCCGCCTAAGAACGGA 454 Query 363 GAGTTTCTTGTGAACTGGCTTGGTGAGAGCGCTGAGGATTTCCGAGTCGGCTCGCTTCTT 422 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 455 GAGTTTCTTGTGAACTGGCTTGGTGAGAGCGCTGAAGATTTCCGAGTCGGCTCGCTTCTT 514 Query 423 CTCTCCGATTGCAAATTCGCTGTTTTCGGTGTCGGCAGCCGTGCGTATGGTGAATCGTAT 482 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 515 CTCTCCGATTGCAAATTCGCTGTTTTCGGTGTCGGGAGCCGTGCGTATGGTGAATCGTAT 574 Query 483 AATGCTGTGGCGAAGGAATTGTCGAGTAGGATGATAGGATTGGGTGGACTCGAGATGATT 542 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 575 AATGCTGTGGCGAAGGAATTGTCGAGTAGGATGATAGGACTGGGTGGACTCGAGATGATT 634 Query 543 CCGGTGGGAGAAGGCGATGTTGATGACGGAGAATTAGACAGAGCATTTCAAGATTGGTGT 602 |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct 635 CCGGTGGGAGAAGGCGATGTTGATGATGGAGAATTAGATAGAGCATTTCAAGACTGGTGT 694 Query 603 -ACTGGAGTTATTAGGGTTCTGAAAGGAGGTTCTGCTCAAGAAACAAATGGGGTTTCGCA 661 | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 695 GA-TGGAGTTATTAGGGTTCTGAAAGGAGGATCTGCTCAAGAAACAAATGGGGTTTCGCA 753 Query 662 GCAGATTGGTGCTGTTGAGAATGATCTTGAGTACTACGATTCAACGGATGATGAAGATGA 721 ||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||| Sbjct 754 GCAGATTGGTGCTGTTGAGGATGATCTGGAGTACTACGATTCAACAGATGAGGAAGATGA 813 Query 722 AGAAAATGATGCAGATGGAGGTATTGTTGATCTTGAAGATATTGCTGGAAAAGCTCCTTC 781 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 814 AGACAATGATGCAGACGGAGGTATTGTTGATCTTGAAGATATTGCTGGAAAAGCTCCTTC 873 Query 782 GAAGAGAAATGGCGTAGTTAAAGTGACTAAAGTTGATGGAAAGAAGGAAATGGTAACCCC 841 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 874 AAAGAGAAATGGTGTAGTTAAAGTGACTAAAGTTGATGGAAAGAAGGAAATGGTGACCCC 933 Query 842 TGTGATTAGAGCAAGCTTAACGAAGCAGGGCTATAAAATAATTGGTTCGCATAGTGGGGT 901 ||||||||||||||||||||||||||||||||||||||| || || |||||||||||||| Sbjct 934 TGTGATTAGAGCAAGCTTAACGAAGCAGGGCTATAAAATTATCGGGTCGCATAGTGGGGT 993 Query 902 TAAAATATGTAGATGGACAAAGTCACAACTTAGAGGCAGGGGTGGTTGCTACAAGCACTC 961 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 994 TAAGATATGTAGATGGACAAAGTCACAACTTAGAGGCAGGGGAGGTTGCTACAAGCACTC 1053 Query 962 CTTTTATGGCATTGAGAGTCACAGGTGCATGGAGACAACACCTAGTTTGGCCTGTGCAAA 1021 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1054 CTTTTATGGCATTGAGAGTCACAGGTGCATGGAGACAACACCTAGTTTGGCTTGTGCAAA 1113 Query 1022 CAAATGTGTCTTTTGTTGGAGGCATCACACCAATCCTGTGGGAAAGAGCTGGCAGTGGAA 1081 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1114 CAAATGTGTGTTTTGTTGGAGGCATCACACAAATCCTGTGGGAAAGAGCTGGCAGTGGAA 1173 Query 1082 GATGGATGAGCCGTCTGTGATTGTGAAAGGTGCTCTTGATCTTCATACAAAGATGATTAA 1141 |||||||||||| || |||||||||||||| |||||||||||||||| ||| |||||||| Sbjct 1174 GATGGATGAGCCTTCAGTGATTGTGAAAGGCGCTCTTGATCTTCATAAAAATATGATTAA 1233 Query 1142 GCAAATGAAAGGAGTTCCAGGTGTAACTCCAGAGAAATTACAAGAAGGTCTAAACCCAAG 1201 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1234 GCAAATGAAAGGAGTTCCAGGTGTAACTCCAGAGAAATTACAAGAAGGTCTTAACCCAAG 1293 Query 1202 ACATTGTGCGTTGTCACTTGTTGGTGAGCCGATTATGTATCCGGAGATCAATGCCCTTGT 1261 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1294 ACATTGTGCGTTATCACTTGTTGGTGAGCCGATTATGTATCCGGAGATCAATGCCCTTGT 1353 Query 1262 AGATGAGCTACATGGAAGGCGTATCTCTACATTTTTGGTTACTAATGCACAATTCCCTGA 1321 |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| || Sbjct 1354 AGATGAGCTACATGGAAGGCGTATTTCTACGTTTTTGGTTACAAATGCACAATTCCCCGA 1413 Query 1322 AAAGATTTTGATGATGAAGCCTATCACCCAGTTGTACGTAAGTGTAGATGCTGCCACCAA 1381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1414 AAAGATTTTGATGATGAAGCCTATCACCCAGTTGTACGTAAGTGTAGATGCTGCCACCAA 1473 Query 1382 AGAGAGCTTGAAGGCCATTGATAGACCTCTCTTTGCTGACTTTTGGGAGCGGTTTATTGA 1441 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 1474 AGAGAGCTTGAAGGCCATTGATAGACCTCTCTTTGCTGACTTTTGGGAACGGTTCATTGA 1533 Query 1442 CTCCTTGAAAGCTCTCCAAGAGAAGCAGCAGCGAACCGTCTACCGTTTAACACTTGTCAA 1501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1534 CTCCTTGAAAGCTCTCCAAGAGAAGCAGCAGCGAACCGTCTACCGTTTAACACTTGTCAA 1593 Query 1502 AGGATGGAATACAGAGGAGCTAGATGCTTATTTCAACCTCTTCAGCATTGGGAAACCTGA 1561 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1594 AGGATGGAACACAGAGGAGCTAGATGCTTATTTCAACCTATTCAGCATTGGGAAACCTGA 1653 Query 1562 TTTCATCGAGATCAAAGGCGTCACATACTGCGGATCCTCTGCAACATCAAAGTTGACAAT 1621 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1654 TTTTATCGAGATCAAAGGCGTCACATACTGCGGATCCTCTGCAACGTCAAAGTTGACAAT 1713 Query 1622 GGAGAATGTACCTTGGCACGCAGATGTTAAAGCATTCTCAGAGGCTCTGTCTCTGAAGAG 1681 |||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 1714 GGAGAATGTACCGTGGCACACAGATGTTAAAGCATTCTCAGAAGCTCTGTCTCTGAAGAG 1773 Query 1682 CAATGGGGAGTACGAGGTTGCTTGCGAGCACGCCCATTCTTGTTGTGTTCTTCTAGGGAG 1741 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 1774 CAATGGGGAGTACGAGGTTGCTTGCGAGCACGCCCACTCTTGCTGTGTTCTTCTAGGGAG 1833 Query 1742 AACCGAAAAGTTCAAAGTGGATGGAAAGTGGTTCACTTGGATTGACTATGAAAAGTTCCA 1801 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1834 AACGGAAAAGTTCAAAGTGGATGGAAAGTGGTTCACTTGGATTGACTATGAAAAGTTCCA 1893 Query 1802 CGATCTGGTGGCTTCTGGAGAACCTTTCACGAGCACAGACTATATGGCTCAGACACCATC 1861 ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 1894 CGATCTGGTTGCTTCTGGAGAACCGTTCACGAGCACAGACTATATGGCTCAAACACCATC 1953 Query 1862 GTGGGCGGTTTATGGAGCACAGGAAGGTGGGTTTGATCCAGAGCAGTTGCGTTACAAGAA 1921 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct 1954 GTGGGCGGTTTATGGAGCGCAGGAAGGTGGGTTTGATCCAGGGCAGTTGCGTTACAAGAA 2013 Query 1922 GGAAAGGCATCATCATCCTAAACCACAAGCGGTTCTAGCTTAA 1964 ||||||| |||||| |||||||||||| |||||| |||||||| Sbjct 2014 GGAAAGGAATCATCCTCCTAAACCACAGGCGGTTTTAGCTTAA 2056 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 98744472015 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5