BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926902
Length=1505
Score E
Sequences producing significant alignments: (Bits) Value
AT1G75220.1 | Symbols: | Major facilitator superfamily protein... 2510 0.0
AT1G19450.1 | Symbols: | Major facilitator superfamily protein... 1519 0.0
> AT1G75220.1 | Symbols: | Major facilitator superfamily protein
| chr1:28229157-28232831 REVERSE LENGTH=1944
Length=1944
Score = 2510 bits (1359), Expect = 0.0
Identities = 1456/1504 (97%), Gaps = 2/1504 (0%)
Strand=Plus/Plus
Query 3 TAGAAGATAGAATCAAAAGATGAGTTTCAGAGATGATAATGAGGAGGGTAGGAATGATTT 62
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 207 TAGAAGATAGAATCAAAAGATGAGTTTCAGGGATGATAATGAGGAGGCTAGGAATGATTT 266
Query 63 GCGACGGCCGTTTATACACACCGGAAGCTGGTACCGGATGGGTTCGAGACAGTCGAGTAT 122
||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 267 GCGTCGGCCGTTTATTCACACCGGAAGCTGGTACCGGATGGGTTCGAGACAATCGAGTAT 326
Query 123 GATGGGCTCGTCTCAAGTTATTCGAGACAGCTCTATCTCTGTTCTTGCATGTGTTTTGAT 182
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 327 GATGGGTTCCTCTCAAGTTATTCGAGACAGCTCTATCTCTGTTCTTGCATGTGTTTTGAT 386
Query 183 CGTTGCTCTTGGTCCTATTCAATTCGGATTCACTTGTGGTTATTCATCTCCAACTCAAGC 242
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 387 CGTTGCTCTTGGCCCTATTCAATTCGGATTCACTTGTGGTTATTCATCTCCAACTCAAGC 446
Query 243 TGCAATCACTAAGGATCTCGGTTTAACGGTATCTGAGTACTCTGTATTTGGTTCTCTGTC 302
||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct 447 TGCAATCACCAAGGATCTCGGTTTAACAGTATCTGAGTACTCTGTGTTTGGTTCTCTTTC 506
Query 303 CAATGTGGGTGCTATGGTTGGTGCAATTGCCAGTGGTCAGATTGCAGAATACATTGGACG 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 507 CAATGTGGGTGCTATGGTTGGTGCAATTGCCAGTGGTCAGATTGCAGAATACATTGGACG 566
Query 363 AAAAGGGTCTCTGATGATTGCTGCAATTCCCAATATCATTGGATGGCTTTGCATATCATT 422
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 567 AAAAGGGTCTCTTATGATTGCTGCAATTCCCAATATCATTGGATGGCTTTGCATATCATT 626
Query 423 TGCAAATGATACTTCTTTTCTTTACATGGGACGACTTTTAGAAGGCTTTGGCGTTGGGAT 482
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 627 TGCAAAAGATACTTCTTTTCTTTACATGGGAAGACTTTTAGAAGGCTTTGGCGTTGGGAT 686
Query 483 CATCTCTTACACTGTACCTGTATATATCGCGGAGATAGCTCCACAAAATATGAGAGGAGG 542
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 687 CATCTCTTACACTGTACCTGTATATATCGCTGAGATAGCTCCACAAAATATGAGAGGAGG 746
Query 543 ATTGGGTTCGGTTAACCAGCTTTCTGTGACAATTGGAATAATGTTGGCGTATCTACTTGG 602
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 747 ATTGGGTTCGGTTAACCAGCTTTCTGTGACAATTGGAATAATGTTGGCGTATTTACTTGG 806
Query 603 CCTCTTTGTTCCATGGAGAATTCTTGCAGTTCTGGGGATATTGCCGTGCACAGTATTGAT 662
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 807 CCTCTTTGTTCCATGGAGAATTCTTGCAGTTCTGGGGATATTGCCGTGTACATTATTGAT 866
Query 663 ACCCGGTCTCTTTTTCATCCCCGAATCCCCTCGCTGGCTGGCAAAAATGGGTATGACAGA 722
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 867 ACCAGGTCTCTTTTTCATCCCCGAATCCCCTCGCTGGCTGGCAAAAATGGGTATGACAGA 926
Query 723 TGATTTTGAAACTTCATTACAAGTTCTTCGAGGATTCGAGACTGATATTACAGTTGAAGT 782
||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 927 TGAATTTGAAACTTCATTACAAGTTCTTCGAGGATTTGAGACTGATATTACCGTTGAAGT 986
Query 783 TAATGAAATCAAGAGATCTGTGGCATCATCTACAAAGCGAAATACAGTTCGGTTTGCAGA 842
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 987 TAATGAAATCAAGAGATCTGTGGCATCATCTACAAAGCGAAATACAGTTCGGTTTGTAGA 1046
Query 843 TCTCAAACGCAGGAGATACTATTTCCCACTTACGGTTGGTATAGGGTTGCTTGTACTTCA 902
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1047 TCTCAAACGCAGGAGATACTATTTCCCACTTATGGTTGGTATAGGGTTGCTTGTACTTCA 1106
Query 903 ACAACTTGGTGGAATTAATGGCGTCCTATTCTATTCCAGTACAATATTTGAATCTGCAGG 962
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1107 ACAACTTGGTGGAATTAATGGTGTCCTATTCTATTCCAGTACAATATTTGAATCTGCAGG 1166
Query 963 AGTTACATCGAGTAACGCAGCAACATTTGGGGTCGGGGCTATTCAGGTAGTCGCTACTGC 1022
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1167 AGTTACATCGAGTAACGCAGCAACATTTGGGGTCGGGGCTATTCAGGTAGTAGCGACTGC 1226
Query 1023 AATATCGACATGGTTGGTGGACAAAGCAGGTCGTCGACTTCTGCTTACCATCTCTTCGGT 1082
|||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1227 AATATCCACTTGGTTGGTGGACAAAGCAGGTCGTCGGCTTCTGCTTACTATCTCTTCGGT 1286
Query 1083 TGGGATGACAATTAGCCTTGTAATTGTCGCAGCTGCTTTCTACCTTAAGGGATTTGTGTC 1142
||||||||| ||||||||||||||||| |||||||||||||| ||||||| |||||||||
Sbjct 1287 TGGGATGACGATTAGCCTTGTAATTGTTGCAGCTGCTTTCTATCTTAAGGAATTTGTGTC 1346
Query 1143 TCCTGATTCAGACATGTACAATTGGCTGAGCATATTGTCAGTAGTTGGAGTTGTGGCAAT 1202
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1347 TCCTGATTCAGACATGTACAGTTGGCTGAGCATATTGTCAGTAGTTGGAGTTGTGGCAAT 1406
Query 1203 GGTTGT-TTCTTTCTCATTGGGAATGGGACCAATACCGTGGCTCATTATGTCTGAGATCC 1261
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGTTGTCTT-TTTCTCATTGGGAATGGGACCAATACCGTGGCTCATTATGTCTGAGATCC 1465
Query 1262 TTCCTGTGAACATAAAGGGTTTAGCTGGAAGTATTGCAACTCTAGCCAATTGGTTCTTTT 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1466 TTCCTGTGAACATAAAGGGTTTAGCTGGAAGTATTGCAACTCTAGCCAATTGGTTCTTTT 1525
Query 1322 CTTGGTTGATCACTATGACAGCAAACTTGCTCTTAGCCTGGAGCAGTGGAGGAACTTTCA 1381
||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1526 CTTGGTTGATCACCATGACAGCAAATTTGCTGTTAGCCTGGAGCAGTGGAGGAACTTTCA 1585
Query 1382 CTCTGTACGGGTTGGTTTGTGCATTCACAGTGGTGTTCGTGACTCTATGGGTTCCTGAGA 1441
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1586 CTCTGTATGGATTGGTTTGTGCATTCACAGTGGTGTTCGTGACTCTATGGGTTCCTGAGA 1645
Query 1442 CCAAAGGCAGAACTCTTGAAGAACTTCAAGCCTTGTTCAGATGAACATACTGAAACAACT 1501
||||||||| ||||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct 1646 CCAAAGGCAAAACTCTTGAAGAACTTCAATCCTTGTTCAGATGAACAAATTGAAACAACT 1705
Query 1502 TCAT 1505
||||
Sbjct 1706 TCAT 1709
> AT1G19450.1 | Symbols: | Major facilitator superfamily protein
| chr1:6731434-6734882 REVERSE LENGTH=1953
Length=1953
Score = 1519 bits (822), Expect = 0.0
Identities = 1273/1489 (85%), Gaps = 37/1489 (2%)
Strand=Plus/Plus
Query 17 AAAAGATGAGTTTCAGAGATGATAAT---GAGGAGGGTAGGAATGAT-TTGCGACGGCCG 72
||||||||||||| || ||||||||| || ||||| || |||||| || || || |||
Sbjct 245 AAAAGATGAGTTTTAGGGATGATAATACGGAAGAGGGAAGAAATGATCTT-CGGCGACCG 303
Query 73 TT-TATACACACCGGAAGCTGGTACCGGATGGGTTCGAGACAGTCGAGTATGATGGGCTC 131
|| | ||||||| ||||| ||||| ||||||||||||||||| || |||||| ||| ||
Sbjct 304 TTCT-TACACACAGGAAGTTGGTATCGGATGGGTTCGAGACAATCTAGTATGTTGGAATC 362
Query 132 GTCTCAAGTTATTCGAGACAGCTCTATCTCTGTTCTT-GCATGTGTTTTGATCGTTGCTC 190
|||||||||||||||||||||||| || |||| |||| || ||||||||||| |||||||
Sbjct 363 GTCTCAAGTTATTCGAGACAGCTCAATTTCTG-TCTTAGCTTGTGTTTTGATTGTTGCTC 421
Query 191 TTGGTCCTATTCAATTCGGATTCACTTGTGGTTATTCATCTCCAACTCAAGCTGCAATCA 250
||||||||||||||||||||||||||||||||||||| || |||||||||||||| || |
Sbjct 422 TTGGTCCTATTCAATTCGGATTCACTTGTGGTTATTCCTCACCAACTCAAGCTGCCATTA 481
Query 251 CTAAGGATCTCGGTTTAACGGTATCTGAGTACTCTGTATTTGGTTCTCTGTCCAATGTGG 310
|||||||||| |||||||| ||||| ||||||||||| ||||| ||||| ||||||||||
Sbjct 482 CTAAGGATCTTGGTTTAACTGTATCAGAGTACTCTGTGTTTGGGTCTCTATCCAATGTGG 541
Query 311 GTGCTATGGTTGGTGCAATTGCCAGTGGTCAGATTGCAGAATACATTGGACGAAAAGGGT 370
||||||||||||| |||||||| |||||||||||||| |||||| ||||||| |||||||
Sbjct 542 GTGCTATGGTTGGAGCAATTGCGAGTGGTCAGATTGCTGAATACGTTGGACGGAAAGGGT 601
Query 371 CTCTGATGATTGCTGCAATTCCCAATATCATTGGATGGCTTT-GCATATCATTTGCAAAT 429
|||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||
Sbjct 602 CTCTGATGATTGCTGCAATTCCCAATATTATTGGATGGCTTTCG-ATATCATTTGCAAAA 660
Query 430 GATACTTCTTTTCTTTACATGGGACGACTT-TTAGAAGGCTTTGGCGTTGGGATCATCTC 488
|||||||||||||||||||||||| || || ||||||||||| || |||||||| |||||
Sbjct 661 GATACTTCTTTTCTTTACATGGGAAGA-TTGTTAGAAGGCTTCGGAGTTGGGATTATCTC 719
Query 489 TTACACTGTACCTGTATATATCGCGGAGATAGCTCCACAAAATATGAGAGGAGGATTGGG 548
|| || || || |||||||| || ||||| |||||||| | |||||||||| || ||
Sbjct 720 CTATACGGTTCCCGTATATATAGCTGAGATCGCTCCACAGACCATGAGAGGAGCCTTAGG 779
Query 549 TTCGGTTAACCAGCTTTCTGTGACAATTGGAATAATGTTGGCGTATCTACTTGGCCTCTT 608
||| ||||||||||||||||| |||||||| |||||| |||||||| |||| || |||||
Sbjct 780 TTCAGTTAACCAGCTTTCTGTAACAATTGGGATAATGCTGGCGTATTTACTCGGTCTCTT 839
Query 609 TGTTCCATGGAGAATTCTTGCAGTTCTGGG-GATATTGCCGTGCACAGTATTGATACCCG 667
||||||||||||||||||||||||| |||| | ||||||| || ||| | |||||||| |
Sbjct 840 TGTTCCATGGAGAATTCTTGCAGTTTTGGGAG-TATTGCCATGTACATTGTTGATACCGG 898
Query 668 GTCTCTTTTTCATCCCCGAATCCCCTCGCTGGCTGGCAAAAATGGGTATGACAGATGATT 727
|||| |||||||| || ||||| ||||| ||| ||||||| |||||| ||||||||||||
Sbjct 899 GTCTTTTTTTCATTCCTGAATCTCCTCGGTGGTTGGCAAAGATGGGTTTGACAGATGATT 958
Query 728 TTGAAACTTCATTACAAGTTCTTCGAGGATTCGAGACTGATATTACAGTTGAAGTTAATG 787
| ||||||||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||
Sbjct 959 TCGAAACTTCATTGCAAGTTCTTCGTGGATTTGAGACTGATATTACCGTTGAGGTTAATG 1018
Query 788 AAATCAAGAGATCTGTGGCATCATCTA-CAAAGCGAAATACAGTTCGGTTTGCAGATCTC 846
||||||||||||||||||||||||||| |||| || | |||||||||||| ||| |||
Sbjct 1019 AAATCAAGAGATCTGTGGCATCATCTAGCAAA-CGTTCTGCAGTTCGGTTTGTAGACCTC 1077
Query 847 AAACGCAGGAGATACTATTTCCCACTTACGGTTGGTATAGGGTTGCTTGTACTTCAACAA 906
|| ||||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||
Sbjct 1078 AAGCGCAGGAGATACTATTTCCCACTGATGGTTGGTATAGGGCTGCTTGCACTTCAACAA 1137
Query 907 CTTGGTGGAATTAATGGCGTCCTATTCTATTCCAGTACAATATTTGAATCTGCAGGAGTT 966
||||| ||||| ||||| ||| | |||||||| |||||||| |||||||||||||| ||
Sbjct 1138 CTTGGAGGAATCAATGGTGTCTTGTTCTATTCGAGTACAATTTTTGAATCTGCAGGGGTG 1197
Query 967 ACATCGAGTAACGCAGCAACATTTGGGGTCGGGGCTATTCAGGTAGTCGCTACTGCAATA 1026
||||| ||||| | || |||||||| || || | | |||||||||| || |||| |||
Sbjct 1198 ACATCAAGTAATGTGGCGACATTTGGAGTTGGCGTTGTTCAGGTAGTGGCGACTGGGATA 1257
Query 1027 TCGACATGGTTGGTGGACAAAGCAGGTCGTCGACTTCTGCTTACCATCTCTTCGGTTGGG 1086
|||||||||||||||| |||||||||||||| ||||| || | |||||||| | ||
Sbjct 1258 GCGACATGGTTGGTGGATAAAGCAGGTCGTCGGCTTCTACTCATGATCTCTTCTATCGGA 1317
Query 1087 ATGACAATTAGCCTTGTAATTGTCGCAGCTGC-TTTCTACCTTAAGGGATTTGTGTCTCC 1145
||||| || ||||| || ||||| |||| ||| ||| |||||||||| |||||| || ||
Sbjct 1318 ATGACGATAAGCCTCGTGATTGTAGCAGTTGCATTT-TACCTTAAGGAATTTGTATCACC 1376
Query 1146 TGATTC-AGACATGTACAA--TTGGCTGAGCATA-TTGTCAGTAGTTGGAGTTGTGGCAA 1201
|||||| | |||||||||| || || ||||| || || ||||||||||||||||| |
Sbjct 1377 TGATTCCA-ACATGTACAACATT--CTAAGCATGGTT-TCCGTAGTTGGAGTTGTGGCTA 1432
Query 1202 TGGTTGTTTCTTTCTCAT-TGGGAATGGGACCAATACCGTGGCTCATTATGTCTGAGATC 1260
||||| |||||| ||| | | |||||||||||||| || ||||| ||||||||||||||
Sbjct 1433 TGGTTATTTCTTGCTC-TCTAGGAATGGGACCAATTCCATGGCTGATTATGTCTGAGATT 1491
Query 1261 CTTCCTGTGAACATAAAGGGTTTAGCTGGAAGTATTGCAACTCTAGCCAAT-TGGTTCTT 1319
|| || ||||| |||||||||||||| |||||||| |||||| | | || |||||| |
Sbjct 1492 CTGCCAGTGAATATAAAGGGTTTAGCCGGAAGTATAGCAACTTT-GTTAAACTGGTTCGT 1550
Query 1320 TTCTTGGTT-GATCACTATGACAGCAAACT-TGCTCTTAGCCTGGAGCAGTGGAGGAACT 1377
|| ||||| | | || ||||| ||||| | |||| ||||| ||||||||||| ||||||
Sbjct 1551 GTCATGGTTAG-TGACAATGACTGCAAA-TATGCTGTTAGCATGGAGCAGTGGGGGAACT 1608
Query 1378 TTCACTCTGTACGGGTTGGTTTGTGCATTCACAGTGGTGTTCGTGACTCTATGGGTTCCT 1437
|||||||| |||| |||||||||| |||||| ||||| || |||| ||| |||||||||
Sbjct 1609 TTCACTCTCTACGCTTTGGTTTGTGGATTCACTGTGGTTTTTGTGAGTCTTTGGGTTCCT 1668
Query 1438 GAGACCAAAGGCAGAACTCTTGAAGA-ACTTCAAGCCTTGTTCAGATGA 1485
||||| ||||| | ||| |||||||| | | ||||| ||||||||||||
Sbjct 1669 GAGACTAAAGGAAAAACGCTTGAAGAGA-TCCAAGCTTTGTTCAGATGA 1716
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74246606055
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5