BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926948
Length=1688
Score E
Sequences producing significant alignments: (Bits) Value
AT1G75620.1 | Symbols: | glyoxal oxidase-related protein | chr... 2436 0.0
AT1G19900.1 | Symbols: | glyoxal oxidase-related protein | chr... 523 2e-147
> AT1G75620.1 | Symbols: | glyoxal oxidase-related protein | chr1:28394779-28396596
REVERSE LENGTH=1818
Length=1818
Score = 2436 bits (1319), Expect = 0.0
Identities = 1557/1672 (93%), Gaps = 15/1672 (1%)
Strand=Plus/Plus
Query 23 aaaTGGCTGCTAAAGCCACAATCCAAATCTTCTCCGACGTCAATCATCTCCGATACTTCG 82
|||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 1 AAATGGCTGCAAAAGCCACAACCCAAATCGTCTCCGACGTCAATCATCTCCGATACTTCG 60
Query 83 CTCTCTTCTTTCTCCTATCGTGCCACGTGGCATCCGGCGAAGAAGGAACATGGGAACTTC 142
|| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 61 CTGTCTTCTTTCTCCTCTCGTGCCACGTGGCATCCGGCGACGAAGGAACATGGGAGCTTC 120
Query 143 TTTTACCAAACGTCGGGATCTCAGCAATGCACTCTCAGCTCCTTCACAACGACCGTGTCA 202
| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 121 TCTTACCAAACGTCGGAATCTCAGCAATGCACTCTCAGCTCCTCCACAACGACCGTGTCA 180
Query 203 TAATGTACGACCGAACCAACTTCGGTCCTTCCAACATCTCTCTCCCCAACGGAGCCTGCC 262
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 181 TAATGTACGACCGAACCAACTTCGGTCCTTCCAACATCTCTCTCCCTAACGGAGCCTGCC 240
Query 263 GCAGCAGCCCGGGTGACGCAGTCTCGAATATCGACTGCACGGCTCACTCGGTCGAATACG 322
|||| ||||| |||||||| |||||||| | ||||||||| |||||||||||||||||||
Sbjct 241 GCAGTAGCCCAGGTGACGCGGTCTCGAAAACCGACTGCACCGCTCACTCGGTCGAATACG 300
Query 323 ACGTCGCTTTGAACCGTATCCGTCCCTTAACAGTCCAATCCAACACTTGGTGCTCCTCAG 382
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 301 ACGTAGCTTTGAACCGTATCCGTCCCTTAACGGTCCAATCCAACACTTGGTGCTCCTCAG 360
Query 383 GCGGAGTCACTCCCGACGGAACTCTTCAACAAACGGGAGGTGATAGAGACGGAGAACGTA 442
| ||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||
Sbjct 361 GAGGAGTCACTCCCGACGGAACTCTTCTACAAACAGGAGGTGATTTAGACGGAGAACGTA 420
Query 443 AAGTTAGACTTTTCGCTCCTTGCGACGACAATAT-TTGTGACTGGACAGAAGTCGATAAC 501
||||||||||| | | |||||||||||||||| | ||||||||||| |||||||||||||
Sbjct 421 AAGTTAGACTTATGGATCCTTGCGACGACAAT-TCTTGTGACTGGATAGAAGTCGATAAC 479
Query 502 GGACTCGCTGCAAGAAGATGGTACGCTACAAACCATGTCCTCCCCGACGGTCGGCAGATC 561
||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||
Sbjct 480 GGACTCGCTGCAAGAAGATGGTACGCTACGAACCATATCCTCCCCGACGGTCGTCAGATC 539
Query 562 ATAATCGGAGGTCGAGGTCAATTCAACTT-CGAGTTTTTCCCCAAAACAAACGCTCCAAA 620
|||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 540 ATAATCGGTGGTCGAGGTCAATTCAA-TTACGAGTTTTTCCCCAAAACAAACGCTCCAAA 598
Query 621 TCTCTACTCTTTACCGTTTTTGTCCGAAACCAACGATCCT---GACGAAAACAATCTTTA 677
| ||||| | | |||||||||||||||||||| |||||| |||||||||||||||||
Sbjct 599 TTTCTACAGTATCCCGTTTTTGTCCGAAACCAATGATCCTGGAGACGAAAACAATCTTTA 658
Query 678 CCCTTACGTTTTCCTAAACACCGATGGAAACTTGTTCATATTCGCTAACAACAGAGCGAT 737
||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 659 CCCTTTCGTTTTCCTCAACACCGATGGTAACTTGTTCATTTTCGCTAACAACAGAGCGAT 718
Query 738 ATTGCTAGATTATTCCAGAAACACTGTCGTCAAAACGTATCCCGAGATCCCTGGAGGTGA 797
|||||| |||||||||| |||||||||||||| ||| ||||| |||||||||||||||||
Sbjct 719 ATTGCTCGATTATTCCACAAACACTGTCGTCAGAACTTATCCGGAGATCCCTGGAGGTGA 778
Query 798 TCCAAGAAGTTATCCGAGCACTGGCTCCGCCGTTCTTTTGCCGATAAAGAACCTTGTGTT 857
||||||||| ||||| |||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct 779 TCCAAGAAGCTATCCAAGCACTGGCTCCGCTGTTCTTTTACCGATCAAGAACCTTGTGTT 838
Query 858 AGAGGTTCTAGTGTGTGGAGGTGCACCAAAAGGATCGTACGACCTCTCTCAAAGGAGAAA 917
||||||||| ||||| ||||||||||| |||||||||||| |||||||| |||||||
Sbjct 839 AGAGGTTCTTGTGTGCGGAGGTGCACCGAAAGGATCGTACAACCTCTCT---TGGAGAAA 895
Query 918 TACTTTTGTGAAAGCTCTTGACACATGTGCAAGAATCAATATCAACGACGTGAATCCTCA 977
|||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 896 CACTTTTGTCAAGGCTCTTGACACGTGTGCGAGAATCAATATCAACGACGTGAATCCTCA 955
Query 978 ATGGATCGTTGAGAAGATGCCGAGAGCGAGAGTTATGGGAGACATGATGCTTCTACCTGA 1037
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 956 ATGGATCGTTGAAAAGATGCCGAGAGCGAGAGTTATGGGAGACATGATGCTTTTACCTGA 1015
Query 1038 CGGAAATGTTCTGTTAATTAACGGTGGTGGTTCAGGGACAGCTGCTTGGGAGCTTGGTCG 1097
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1016 CGGAAATGTTCTGTTAATTAACGGTGGTTCTTCAGGGACAGCTGCTTGGGAGCTTGGTCG 1075
Query 1098 TGAACCGGTTTTTA-ATCCTGATATTTACCATCCCGATAAACCGGTCGGTTTAAGATTCG 1156
|||||||| ||||| |||||||| ||||||||||||||||||||||||||| |||||| |
Sbjct 1076 TGAACCGG-TTTTACATCCTGATCTTTACCATCCCGATAAACCGGTCGGTTCAAGATTTG 1134
Query 1157 AAGCTCAAAACCCAAGCAAGATCCCTCGAATGTACCATTCTACCGCGACTTTGCTTCGTG 1216
||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 1135 AAGTTCAAAACCCAAGCACTATCCCTCGAATGTACCATTCTATCGCGACTTTGCTTCGTG 1194
Query 1217 ACGGGAGAGTTCTTGTTGGAGGAAGCAACCCTCACGCGTTTTACAATTTCACCGGCGTTC 1276
|||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1195 ACGGGAGAATTCTCGTTGGAGGAAGCAACCCTCACGCGTTTTACAATTTCACCGGCGTGC 1254
Query 1277 TTTTCCCGACGGAGCTGAGGTTAGAGGCTTTTTCGCCGTCGTATTTGGATC-CTAAGTAC 1335
||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||
Sbjct 1255 TTTTCCCGACGGAGCTGAGATTAGAAGCTTTTTCGCCGTCGTATTTGGA-CACTAAGTAC 1313
Query 1336 TCGAGTATTCGTCCGAGTATTGTGGATCCTAGGTCACAGTCAACGATCAACTACGGTAGA 1395
|||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||
Sbjct 1314 TCGAGTCTTCGTCCGAGTATTGTGGATCCTAGGCCACAGACAACGGTAAACTACGGTAGA 1373
Query 1396 ATCTTGAGGCTGAGGTATACTGTAACCGGAAGAGTGAAAAGTCCGGTTAAAGTGACGATG 1455
|||||||||| |||| || ||| | ||||||||||||||||||||||||||| ||||||
Sbjct 1374 GTCTTGAGGCTTAGGTTTATTGTGAGCGGAAGAGTGAAAAGTCCGGTTAAAGTTACGATG 1433
Query 1456 TTGTTTCCTTCGTTTACTACACATTCTTTCTCGATGCATCAAAGGCTTTTGGTTCTTGAT 1515
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1434 TTATTTCCTTCGTTTACTACACATTCTTTCTCGATGCATCAAAGGCTTTTGGTTCTTGAT 1493
Query 1516 CATGTCATTTCTTTTAGACTCGGGATTAGCAGGATTTATGAAGTTAGAGTTAGGACTCCA 1575
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1494 CATGTCATTTCTTTTAAACTCGGGATTAGCAAGATTTATGAAGTTAGAGTTAGGACTCCA 1553
Query 1576 AGCTCCCCGATTCTTGCACCGCCCGGTTATTACATGGTTTTCGTTGTAAACCAAGATATA 1635
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1554 AGCTCTGCGATTCTTGCACCACCCGGTTATTACATGGTTTTCGTTGTAAACCAAGATATA 1613
Query 1636 CCTAGTGAAGGTCTTTGGGTACGTTTACAGTGAACGTGGT-CATCGACATTG 1686
|| ||||||||||||||||||||||||||||||| ||| | |||| ||||||
Sbjct 1614 CCCAGTGAAGGTCTTTGGGTACGTTTACAGTGAAAGTGATTCATCAACATTG 1665
> AT1G19900.1 | Symbols: | glyoxal oxidase-related protein | chr1:6906899-6908741
REVERSE LENGTH=1843
Length=1843
Score = 523 bits (283), Expect = 2e-147
Identities = 1165/1575 (74%), Gaps = 123/1575 (8%)
Strand=Plus/Plus
Query 151 AACGTCGGGATCTCAGCAATGCACTCT-CAGCTCCTTCACAACGACCGTGTCATAATGTA 209
|||||||| ||||| || ||||| | | || || || || |||||||||||| |||||||
Sbjct 172 AACGTCGGAATCTCCGCGATGCA-TATGCAACTTCTCCATAACGACCGTGTCGTAATGTA 230
Query 210 CGACCGAACCAACTTCGGTCCTTCCAACATCTCTCTCCCCAACGG-AGCCTGCCGCAG-C 267
|||||||||||||||||| || || ||||||||||| || ||||| | |||||| | |
Sbjct 231 CGACCGAACCAACTTCGGACCATCAAACATCTCTCTACCTAACGGTA-ACTGCCG-TGAC 288
Query 268 AGCCCGGGTGACGCAGTCTCGAATATCGACTGCACGGCTCACTCGGTCGAATACGACGTC 327
| ||| ||||| ||||| || ||||||||||| ||||||||| ||||||||||||||
Sbjct 289 AACCCCCAAGACGCCGTCTCCAAAATCGACTGCACAGCTCACTCGATCGAATACGACGTC 348
Query 328 GCTTTGAAC-CGTATCCGTCCCTTAACAGTCCAATCCAACACTTGGTGCTCCTCAGG--C 384
|| |||| | ||||| || ||||| || ||||||||||| |||||||| || || |
Sbjct 349 GCAACGAACAC-CATCCGACCTTTAACGGTACAATCCAACACATGGTGCTCATCCGGTTC 407
Query 385 GGAGTCACTCCCGACGGAACTCTTCAACAAACGGGAGGTGATAGAGACGGAGAACGTAAA 444
|| || || ||||| |||| ||||| || || || |||||||||||| | ||
Sbjct 408 GG-TTC-GACCGGACGGTGTTCTTGTCCAAACCGGTGGAGACCGAGACGGAGAAC-TTAA 464
Query 445 G-TTAG-A-CTTTTCGCTCCTTGCGACGACAAT-ATTTGTGACT-GGACAGAAGTCG-AT 498
| || | ||||| ||||||| | ||||| | ||||| | || | ||| | | |
Sbjct 465 GACAAGAACCTTTT--CTCCTTGTAATAACAATCA-ATGTGATTGGGTC-GAAAT-GAAC 519
Query 499 AACGGACTCGCTGCA-AGAAGATGGTACGCTACAAACCATGTCCTCCCCGACGGTCGGCA 557
||||| | | ||||||||||||||| | |||||| | || ||||||||| ||
Sbjct 520 AACGG-TTTAAAAAAGAGAAGATGGTACGCTTCCAACCATATTCTTCCCGACGGTAAACA 578
Query 558 GATCATAATCGGAGGTCGAGGTCAATTCAACTTCGAGTT-TTTCCCCAAAAC-A-AACGC 614
||| | || ||||||| ||| |||||||||| |||||| ||| |||||||| | || |
Sbjct 579 AATCGTCATGGGAGGTCAAGGACAATTCAACTACGAGTTCTTT-CCCAAAACGACAA-AC 636
Query 615 TCCAAATCTCTA--CTCTTTACCGTTTTTGTCCGAAAC-CAACGATC-CTGAC--GAAAA 668
|| || | || | | |||||||||||| |||| || | | |||| ||| || ||
Sbjct 637 -CCTAA-C-GTAGTCGCGTTACCGTTTTTGGCCGAGACTC-ATGATCAAGGACAAGAGAA 692
Query 669 CAATCTTTACCCTTACGT-TTTCCTAAACACCGAT-GGAAACTTGTTCATATTCGCTAAC 726
|||||||| |||| || ||| | || |||||| |||| | | || || ||||||||
Sbjct 693 TAATCTTTATCCTTTTGTGTTT-ATGAATACCGATGGGAATC-TATTTATGTTCGCTAAT 750
Query 727 AACAGAGCGATATTGCTAGATTAT-TCCAGAAACACTGTCGTCAAAACGTATCCCGAGA- 784
|||||||||||||| || || ||| | || ||||| || || ||||| | ||| | ||
Sbjct 751 AACAGAGCGATATTACTCGACTATGTTAAG-AACACGGTGGTGAAAACTTTTCCGGCGAT 809
Query 785 TCCCTGGAGGTGATCCAAGAAGTTATCCGAGCACTGGCTCCGCCGTTCTT-TTGCCGATA 843
|||| || |||||||| |||| ||||||||||||||||| |||| | || || ||| ||
Sbjct 810 TCCC-GGTGGTGATCCGAGAAACTATCCGAGCACTGGCTCAGCCG-TGTTATTACCGTTA 867
Query 844 AAGAA-C------C---T--TGT-GTTA--GAGGTTCTAGTGTGTGGAGGTGCACCAAAA 888
||||| | | | ||| | | ||||||||||||||||||||||||||||||
Sbjct 868 AAGAATCTTGAAGCGGATAATGTCGAGACGGAGGTTCTAGTGTGTGGAGGTGCACCAAAA 927
Query 889 GGATCGTACGACCTCTCTCA-AAGGAGAAATACTTTTGTGAAAGCTCTTGACACATGTGC 947
||||| ||| ||||| || | || ||||| ||||| |||||||| |||||||| |||||
Sbjct 928 GGATCATACAACCTCGCT-AGAA--AGAAA-ACTTTCGTGAAAGCGCTTGACACGTGTGC 983
Query 948 AAGAATCAATATCAACGACGTGAATCCTCAATGGATCG-TTGAGAAGATGCCGAGA-GCG 1005
||| ||||| || ||||| | || ||| ||||| || ||||||||||||| | | ||
Sbjct 984 AAGGATCAAGATTAACGATGCCAAACCTGAATGGG-CGGTTGAGAAGATGCC-ACATGCT 1041
Query 1006 AGAGTTATGGGAGACATGATGC-TTCTACCTGACGGAAATGTTCTGTTAATTAACGGTGG 1064
|||||||||||||| ||||| | || | || ||||| ||||| || |||| ||||||||
Sbjct 1042 AGAGTTATGGGAGATATGATTCCTT-TGCCAAACGGAGATGTTTTGCTAATCAACGGTGG 1100
Query 1065 -TGGTTCAGGGACAGCTGCTTGGGAGCTTGGTCGTGA-ACCGGTTTTTA--ATCCTGATA 1120
| || || || ||||| ||||||||||||||| | ||||||||| | | || ||
Sbjct 1101 ATCTTTT-GGTACTGCTGCATGGGAGCTTGGTCGT-ACACCGGTTTT-AGCA-CCAGACC 1156
Query 1121 TTTACCATCCCGATAAACCGGTCGGTT-TAAGATTCGAAGCTCAAAACCCAAGCAAGA-T 1178
| ||||||||||| || ||||| || | || | || ||| | | || || | | | | |
Sbjct 1157 TATACCATCCCGAGAATCCGGTTGGCTCTAGGTTT-GAATCGCTAAGGCCGA-CTACAAT 1214
Query 1179 CCCTCGAATGTACCATTCTACCGCGACT-TTGCTTC---GTGACGGGAGAGTTCTT-GTT 1233
||| ||||||| || || ||||| || || |||| ||||||| || ||| || ||
Sbjct 1215 CCCGAGAATGTATCA--CT-CCGCGGCTATT-CTTCTACGTGACGGTAGGGTT-TTAGTC 1269
Query 1234 GGAGGAAGCAACCCTCACGCGTTTTACAATTTCACCGGCGTTCTTTTCCCGACGGAGCTG 1293
||||||||||| ||||| |||||||| || | |||||| || ||||||||||||||| ||
Sbjct 1270 GGAGGAAGCAATCCTCATGCGTTTTATAACTACACCGGAGTGCTTTTCCCGACGGAGTTG 1329
Query 1294 AGGTTAGAGGCTTTTTCGCCG-TCGTATTTGGATCCTAAGTACTCGAGTATTCGTCCGA- 1351
|| ||||| ||||| || ||| | || | | | ||| |||| | ||||||| |
Sbjct 1330 AGCTTAGAAGCTTTCTCTCCGGTT-TACCTACAACGGGAGTTTTCGAATCTTCGTCCCAA 1388
Query 1352 GTATTGTGGATCCTAGGTCA-CAGTCAACGATCAACTACGGTA-GAATCTTGAGGCTGAG 1409
| ||| | |||| | | ||||| | ||| || || || | |||| |||| | |||
Sbjct 1389 G-ATTATATCTCCT-GAACCTCAGTCGATGATTAAATATGGGACGAAT-TTGAAGTTGAA 1445
Query 1410 GTATACTGTAACCGGAAGA-GTGAAAAGTCCGGTTAAAGTGACGATGTTGTTTCCTTCGT 1468
| | | || |||||| || || | | ||||| |||||||| ||| | ||||| |||
Sbjct 1446 ATTTTCGGTCACCGGA-GAAGTTACGACTCCGGCGAAAGTGACTATGGTATTTCCGACGT 1504
Query 1469 TTACTACACATT-CTTTCTCGATGCATCAAAGGCTTTTGGTTCTTG-ATCA-TGTCATTT 1525
| || || ||| ||| | ||||| |||| ||| |||||||| ||| | || ||| | |
Sbjct 1505 TCACGACGCATAGCTT-CGCGATGAATCAGAGGGTTTTGGTT-TTGGA-CAATGTTAAGT 1561
Query 1526 CTTTT-AG-ACTCGGGAT-TAGCAGGATTTATGAAGTT-AGAGTTAGGACTCCAAGCTCC 1581
|| || | || | | || | || ||||| ||| | ||| |||||||| || ||
Sbjct 1562 -TTACGAGGAAA-GGCAAATCGCCG-ATGTATGAGGTTCA-AGTGAGGACTCCGAGGTCG 1617
Query 1582 CCGATTCTTGCACCGCCCGGTTATTACATGGTTTTCGTTGTAAACCAAGATATACCTAGT 1641
||| | ||||| ||| |||||||| ||| |||| || || || ||||| ||||| ||
Sbjct 1618 GCGAATATTGCATGGCCTGGTTATTATATGATTTTTGTGGTGAATCAAGACATACCAAGC 1677
Query 1642 GAAGGTCTTTGGGTA 1656
|||||| ||||||||
Sbjct 1678 GAAGGTGTTTGGGTA 1692
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83433305790
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5