BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926953
Length=1621
Score E
Sequences producing significant alignments: (Bits) Value
AT1G75680.1 | Symbols: AtGH9B7, GH9B7 | glycosyl hydrolase 9B7 ... 2556 0.0
AT1G19940.1 | Symbols: AtGH9B5, GH9B5 | glycosyl hydrolase 9B5 ... 979 0.0
> AT1G75680.1 | Symbols: AtGH9B7, GH9B7 | glycosyl hydrolase 9B7
| chr1:28417052-28419529 REVERSE LENGTH=2039
Length=2039
Score = 2556 bits (1384), Expect = 0.0
Identities = 1528/1599 (96%), Gaps = 4/1599 (0%)
Strand=Plus/Plus
Query 4 CTCGTGGAATTC-GAAAAATGGGGGAGAAATCCAAGTCAAGAGGTTGGTGCGGTTGGTTT 62
||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 282 CTC-TGGAATTCAAAAAAATGGAGGAGAAATCCAAGTCAAGAGGTTGGTGCGGTTGGTTC 340
Query 63 ATCGCGATTATTGTGCTTGCTTCTGTTGTCCTCGCCGTCGTTTACACCGTTAAATTGAGA 122
||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 341 ATCGCCATTATTGTGCTAGCTTCTGTTATCCTCGCCGTCGTTTACACTGTTAAATTGAGA 400
Query 123 ATGAAGAAACCCGGTGACGATGATGGTGGTGGTCCCGTTCCTGGACCTCCCGGCGCCATT 182
| ||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 401 ACGAAGAAATCCGGTGACGATGACGGTGGCGGTCCCGTTCCTGGACCTCCCGGCGCCATT 460
Query 183 GATAAGAAATACGCCGACGCTCTCAAGCTCGCTTTGCAGTTCTTCGATATCCAGAAATCT 242
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 461 GATAAGAAATACGCCGACGCTCTTAAGCTCGCTTTGCAGTTCTTCGATATCCAGAAATCT 520
Query 243 GGTAAATTGGAGAACAATAAGATATCTTGGAGAGGAGATTCAGGTCTTAAAGATGGAAGT 302
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 521 GGTAAATTGGAGAACAATAAGATACCTTGGAGAGGAGATTCAGGTCTTAAAGATGGAAGT 580
Query 303 GAAGCCAATCTTGATCTTTCCAAGGGTTTATATGATGCTGGAGATCATATTAAGTTTGGT 362
|||| ||||| ||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 581 GAAGATAATCTGGATCTTTCCAAAGGCTTATATGATGCTGGAGATCATATAAAGTTTGGT 640
Query 363 TTTCCAATGGCTTTCACTGCTACTGTTTTGTCATGGTCGATTCTTGAGTATGGTGATCAA 422
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 641 TTTCCAATGGCTTTCACTGCTACAGTTTTGTCATGGTCGATTCTTGAGTATGGTGATCAA 700
Query 423 ATGAATGTAGTGAACCAATTGGATCCTGCTAAAGACTCGCTCCGGTGGACCACTGACTAT 482
||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 701 ATGAATGCAGTGAACCAATTGGATCCTGCTAAAGACTCTCTCCGGTGGATCACTGACTAT 760
Query 483 CTTATCAAAGCTCATCCTTCTGATAATGTCCTCTATATTCAGGTGGGAGATCCGAAAGTA 542
||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct 761 CTTATCAAAGCTCATCCTTCTGACAATGTCCTCTATATCCAGGTGGGAGATCCAAAAGTA 820
Query 543 GATCATCCATGTTGGGAGAGACCAGAGGATATGAAAGAGAAGAGACCACTCACTAAAATT 602
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 821 GATCATCCATGCTGGGAGAGACCAGAGGATATGAAAGAGAAGAGACCACTTACTAAAATT 880
Query 603 GATGCAGATACTCCAGGGACAGAGGTTGCTGCGGAAACTGCTGCAGCTATGGCTTCAGCA 662
|||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 881 GATGTAGATACTCCAGGGACAGAGGTTGCTGCTGAAACTGCTGCAGCTATGGCTTCAGCG 940
Query 663 TCTTTGGTGTTTAAGGATAGTGATCCTCA-ATATTCAGCCACGCTTCTGAAGCATGCGAA 721
||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||||
Sbjct 941 TCTTTGGTGTTTAAGGATAGTGATCCT-ACATATTCAGCAACGCTTCTGAAACATGCGAA 999
Query 722 GCAGTTGTTTGATTTTGCTGACACTAAGAGAGGCTCTTACAGTGTCAACATACCTGAGGT 781
|||||||||| ||||||| || || |||||||||||||||||||| ||||||||||||||
Sbjct 1000 GCAGTTGTTTAATTTTGCAGATACAAAGAGAGGCTCTTACAGTGTTAACATACCTGAGGT 1059
Query 782 TCAGAAGTTTTACAATTCAACGGGATACGGGGATGAGCTACTATGGGCAGCTAGTTGGTT 841
|||||||||||||||||| || ||||| || |||||||||||||||||||||||||||||
Sbjct 1060 TCAGAAGTTTTACAATTCGACTGGATATGGTGATGAGCTACTATGGGCAGCTAGTTGGTT 1119
Query 842 GTATCATGCAACGGAGGACAAAACTTACCTTGATTATGTGTCTAATCATGGAAAAGAATT 901
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1120 GTATCATGCAACAGAGGATAAAACTTACCTTGATTATGTGTCTAATCATGGAAAAGAATT 1179
Query 902 TGCTAGTTTTGGAAATCCAACTTGGTTTAGTTGGGACAACAAGCTTGCAGGAACACAGGT 961
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1180 TGCTAGTTTTGGAAATCCTACTTGGTTTAGTTGGGACAACAAGCTTGCAGGAACACAGGT 1239
Query 962 ACTATTATCAAGATTACTCTTCTTTAAAAAAGATTTATCAGGAAGCAAGGGACTTGGAAA 1021
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1240 ACTATTATCAAGATTACTCTTCTTTAAGAAAGATTTATCAGGAAGCAAGGGACTTGGAAA 1299
Query 1022 TTACAGGAACACAGCTAAAGCTGTCATGTGTGGACTTCTACCAAAGTCTCCAACAGCTAC 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1300 TTACAGGAACACAGCTAAAGCTGTCATGTGTGGACTTCTACCAAAGTCTCCAACATCTAC 1359
Query 1082 AGCTAGTAGAACAAACGGTGGTCTTATATGGGTTAGTGAATGGAACTCGATGCAACAATC 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1360 AGCTAGTAGAACAAACGGTGGTCTTATATGGGTTAGTGAATGGAACTCGATGCAACAATC 1419
Query 1142 CGTTTCCTCAGCGTTCTTAGCCTCGCTTTTCAGTGATTACATGCTCACTTCCCGTATCCA 1201
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1420 CGTTTCGTCAGCGTTTTTAGCCTCGCTTTTCAGTGATTACATGCTCACTTCCCGTATCCA 1479
Query 1202 TAAAATATCATGCGACGGGAAAATTTTCAAAGCAACAGATCTCAGGGATTTCGCCAAATC 1261
||||||||| |||||||||||||| |||||||||||||| || || ||||||||||||||
Sbjct 1480 TAAAATATCTTGCGACGGGAAAATCTTCAAAGCAACAGAGCTTAGAGATTTCGCCAAATC 1539
Query 1262 GCAGGCTGATTACATGCTGGGGAAGAATCCGCTGGGAACAAGCTTCGTGGTGGGTTATGG 1321
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 1540 GCAGGCTGATTACATGCTGGGGAAGAATCCGTTGGGAACGAGCTTCGTGGTGGGTTATGG 1599
Query 1322 AGACAAATACCCACAATTTGTGCATCATAGAGGAGCTTCGATTCCGGCAGATGCAACCAC 1381
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 1600 AGACAAATACCCACAATTTGTGCATCATAGAGGAGCTTCGATCCCGGCAGATGCAACAAC 1659
Query 1382 GGGTTGCTTAGATGGATTCAAATGGTTTAACTCAACGAAACCAAACCCAAACATAGCATA 1441
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1660 GGGTTGCTTAGATGGATTCAAATGGTTTAACTCGACGAAACCAAACCCAAACATAGCATA 1719
Query 1442 TGGTGCACTCGTTGGTGGGCCTTTCTTCAACGAGACGTTTACTGACTCACGAGAGAACCC 1501
|||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1720 TGGTGCACTCGTAGGTGGACCTTTCTTCAATGAGACGTTCACTGACTCACGAGAGAACCC 1779
Query 1502 GATGCAGAACGAGCCAACCACTTACAACAATGCACTCCTCGTTGGTCTCTTGTCTAGTCT 1561
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1780 AATGCAGAACGAGCCAACCACTTACAACAATGCACTCCTCGTTGGTCTCTTGTCTAGTCT 1839
Query 1562 TGTCACTACCTCTTCTGCTTTACAATCGTTGAAGTGAGC 1600
||||||||| |||||| ||||||| ||||||||||||||
Sbjct 1840 TGTCACTACATCTTCTACTTTACAGTCGTTGAAGTGAGC 1878
> AT1G19940.1 | Symbols: AtGH9B5, GH9B5 | glycosyl hydrolase 9B5
| chr1:6918191-6920377 REVERSE LENGTH=1789
Length=1789
Score = 979 bits (530), Expect = 0.0
Identities = 1149/1440 (80%), Gaps = 74/1440 (5%)
Strand=Plus/Plus
Query 174 GGCGCCATTGATAAGAAA-TACGCCGACGCTCTCAAGCTCGCTTTGCAGTTCTTCGATAT 232
||| ||| || ||| ||| ||||| | ||||||||| ||||| |||| |||||||||||
Sbjct 236 GGCTCCAATGTTAA-AAACTACGCTAATGCTCTCAAGATCGCTATGCAATTCTTCGATAT 294
Query 233 CCAGAAATCTGGTAA-ATTGGAGAACAATAAGATATCTTGGAGAGGAGATTCAGGTCTTA 291
||||||||||||||| || || ||||| ||||||| ||||||||||||||||||||||
Sbjct 295 CCAGAAATCTGGTAAGCTT-GAAAACAACGAGATATCATGGAGAGGAGATTCAGGTCTTA 353
Query 292 AAGATGGAAGTGAAGCCAA-TCTTGATCTTTCCAAGGGTTTATATGATGCTGGAGATCAT 350
|||||||||| ||||| || | | |||||||| || ||||| || ||||||||||||||
Sbjct 354 AAGATGGAAGCGAAGC-AAGTATCGATCTTTCGAAAGGTTTGTACGATGCTGGAGATCAC 412
Query 351 ATTAAGTTTGGTTTTCCAATGGCTTTCACTGCTACTGTTTTGTCATGGTCGATTCTTGAG 410
|| ||||||||||| |||||||||||||||||||| ||| | |||||||| ||||||||
Sbjct 413 ATGAAGTTTGGTTTCCCAATGGCTTTCACTGCTACAGTTCTCTCATGGTCCATTCTTGAA 472
Query 411 TATGGTGATCAAATGAATG-TAGTGAACCAATTGGATCCTGCTAAAGACTCGCTCCGGTG 469
|| |||||||||||| | | ||||| | |||||| |||||||||||| ||| ||
Sbjct 473 TACGGTGATCAAATGGCTTCTC-TGAACTTACTGGATCATGCTAAAGACTCTCTCAAATG 531
Query 470 GACCACTGACTATCTTATCAAAGCTCATCCTTCTG-ATAATGTCCTCTATATTCAGGTGG 528
||| ||||| | ||| ||||| |||||||||||| | ||||||||||||||||||||||
Sbjct 532 GACTACTGATTTTCTCATCAATGCTCATCCTTCTCCA-AATGTCCTCTATATTCAGGTGG 590
Query 529 GAGATCCGAAAGTA-G-ATCATCCATGTTGGGAGAGACCAGAGGATA-TGAA-AGAGAAG 584
||||||| | | | | ||||| ||||||||| |||||||| | | ||| ||| |||
Sbjct 591 GAGATCC-AGTG-ACGGATCATAAATGTTGGGATAGACCAGAA-ACAATGACTAGA-AAG 646
Query 585 AGACCACTCACTAAAATTGATGCAGATACTCCAGGGACAGAGGTTGCTGCGGAAACTGCT 644
||| | || ||||| |||||| || | ||||||||||| ||||||||||| || || ||
Sbjct 647 AGAACTCTTACTAAGATTGATACAAAGACTCCAGGGACTGAGGTTGCTGCAGAGACAGCA 706
Query 645 GCAGCTATGGCTTCAGCATCTTTGGTGTTTAAGGATAGTGATCCTCAA-TATTCA-GCCA 702
|||||||||||| |||||||||| || ||||| || |||||| | ||| |||||| || |
Sbjct 707 GCAGCTATGGCTGCAGCATCTTTAGTCTTTAAAGAAAGTGATAC-CAAGTATTCAAGC-A 764
Query 703 CGCTTCTGAAGCATGCGAAGCAGTTGTTTGATTTTGCTGACACTAAGAGAGGCTCTTACA 762
||||| |||| ||||||||||||||||| |||||||| || | ||| ||||| |||||||
Sbjct 765 CGCTTTTGAAACATGCGAAGCAGTTGTTCGATTTTGCGGATAATAACAGAGGATCTTACA 824
Query 763 GTGTCAACATACCTGAGGTTCAGAAGTT-TTACAATTCAACGGGATACGGGGATGAGCTA 821
|||| || ||||||||||||||| || ||| || ||||| || || || ||||||||
Sbjct 825 GTGTTAATATACCTGAGGTTCAGTC-TTATTATAACTCAACTGGTTATGGAGATGAGCTT 883
Query 822 CTATGGGCAGCTAGTTGGTTGTATCATGCAACGGAGGA-CAAAACTTACCTTGA-TTATG 879
|| ||||||||| |||||||| |||||||| ||||| |||| | || ||||| || ||
Sbjct 884 CTTTGGGCAGCTTCATGGTTGTACCATGCAACAGAGGATCAAA-CATATCTTGACTT-TG 941
Query 880 TGTCT-AATCATGGAAAAGAATTTGCTAGTTTTGGAAATCCAACTTGGTTTAGTTGGGAC 938
|||| || |||| |||| |||| || |||||||| |||| | |||||||||||||||
Sbjct 942 TGTCGGAAA-ATGGTGAAGAGTTTGGTAATTTTGGAAGTCCATCATGGTTTAGTTGGGAC 1000
Query 939 AACAAGCTTGCAGGAACACAGGTACTATTATCAAGATTA-CTCTTCTTT-AAAAAAGATT 996
||||||||| |||||||||| ||||||||||||||||| | ||| ||| ||||||| |
Sbjct 1001 AACAAGCTTCCAGGAACACATATACTATTATCAAGATTAAC-CTT-TTTCAAAAAAGGGT 1058
Query 997 TATCAGGAAGCAAGGGACTTGGAAA-TT--ACAGGAACACAGCTA-AAGCTGTCATGTGT 1052
||||||||||||| |||||| || || | || || ||||| | ||||||||||||||
Sbjct 1059 TATCAGGAAGCAAAGGACTTC-AAGGTTTTAAAG-AA-ACAGC-AGAAGCTGTCATGTGT 1114
Query 1053 GGACTTCTACCAAAG-TCTCCAACAGCTACAGCTAGTAGAACAAACGGTGGTCTTATATG 1111
|| ||| |||||| | || ||||| |||||| |||||||||| | |||||||| |||||
Sbjct 1115 GGGCTTATACCAA-GCTCACCAACTGCTACATCTAGTAGAACCGATGGTGGTCTAATATG 1173
Query 1112 GGTTAGTGAATGGAACT-CGATGCAACAATCC-GTTTCCTCAGCGTT-CTTAGCCT-CGC 1167
||| ||||||||||| | | ||||||| || || ||||| || || || ||| | | |
Sbjct 1174 GGTAAGTGAATGGAA-TGCCCTGCAACAC-CCTGTGTCCTCTGCATTTCT-AGC-TACAC 1229
Query 1168 TTTTCAGTGATTACATGCTCACTTCCCGTATCCATAAAATATCATGCGACGGGAA-AAT- 1225
| | |||||| || |||||||| || || | | || |||| ||| | | || |||
Sbjct 1230 TCTACAGTGACTATATGCTCACCTCTGGTGTTAAGGAACTATCTTGC-A-GTGACCAATC 1287
Query 1226 -TTTCAAAGCAACAGATCTCAGGGATTTCGCCAAATCGCAGGCTGATTACATGCTGGGGA 1284
||| ||| | |||||||||| | ||||| | ||| ||||||||||||||| | ||||
Sbjct 1288 CTTT-AAACCTTCAGATCTCAGAAAATTCGCTAGATCTCAGGCTGATTACATGTTAGGGA 1346
Query 1285 AGAATCCGCTGGGAACA--AGCT-TCGTGGTGGGTTATGGAGACAAATACCCACAATTTG 1341
| |||||| | ||| | |||| | ||||||| ||||| || ||||| ||| ||||||
Sbjct 1347 AAAATCCG--GAGAAAATGAGCTATT-TGGTGGGATATGGTGAGAAATATCCAGAATTTG 1403
Query 1342 TGCATCATAGAGGAGCTTCGATTCCGGCAGATGCAACCACGGGTTGCTTAGATGGATTCA 1401
||||||||||||||||||| || || || ||||||||||| || ||| |||||| || |
Sbjct 1404 TGCATCATAGAGGAGCTTCAATACCAGCTGATGCAACCACAGGATGCAAAGATGGGTTTA 1463
Query 1402 AATGGTTTAACTCA-ACGAAACCAAACCCAAACATAGCATATGGTGCACTCGTTGGTGGG 1460
| ||| ||||||| | ||| ||||| || || |||| ||||| ||||| ||||||||
Sbjct 1464 AGTGGCTTAACTCGGATGAA-CCAAATCCGAATGTAGCTTATGGAGCACTTGTTGGTGGA 1522
Query 1461 CC-TTTCTTCAACGAGACGTTTACT-GACTCACGAGAG-AACCCGATGCAGAACGAGCCA 1517
|| ||| || || || ||||||| | ||| || | || || | ||||| || ||||||
Sbjct 1523 CCGTTT-TTGAATGACACGTTTA-TAGACGCAAG-GAACAATTCTATGCAAAATGAGCCA 1579
Query 1518 ACCACTTACAACAATGCACTCCTCGTTGGTCTCTTGTCTAGTCTTG-TCACTACCTCTTC 1576
| |||||| |||| ||| || | |||||||| ||||| ||| ||| | ||||| |||||
Sbjct 1580 AGCACTTATAACAGTGCTCTTGTTGTTGGTCTTTTGTCGAGT-TTGGTTACTACTTCTTC 1638
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80069869275
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5