BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927005 Length=499 Score E Sequences producing significant alignments: (Bits) Value AT4G37210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 545 1e-154 > AT4G37210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17512259-17514625 FORWARD LENGTH=1800 Length=1800 Score = 545 bits (295), Expect = 1e-154 Identities = 360/390 (92%), Gaps = 9/390 (2%) Strand=Plus/Plus Query 75 CTATCGATATGGAACAGCTCTCCTGG-AAAGGCTCAAGCTGAAGCTGATCCACTTGGTAA 133 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| || Sbjct 492 CTATCGATATGGATTAGCTCTCCTGGCAAAGGCTCAAGCTGAAGCTGATCCACTTGGGAA 551 Query 134 CATACCCAAGAAAGAAGGCGAAGTTCAGCAGGAGTCCAGCAATGGTGAATCTTTGGCTCC 193 ||| || ||||||||||| ||||||||||| |||||||||||||||||||| ||||||| Sbjct 552 CATGCCTAAGAAAGAAGGTGAAGTTCAGCAAGAGTCCAGCAATGGTGAATCGCTGGCTCC 611 Query 194 AACTGTTGTTTCTA-GTGACCCAGAGAGACAAGGGAGTTCAAGTGGGCAAGAAGGTTCTG 252 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 612 TTCTGTTGTTTC-AGGTGACCCAGAGAGACAAGGGAGTTCAAGTGGGCAAGAAGGTTCTG 670 Query 253 GTGGTAAAGACCAAGGAGAGGATGGTGAAGATTGTCAAGATGATGACCTATCTGATGCTG 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 671 GTGGTAAAGACCAAGGAGAGGATGGTGAAGATTGTCAAGATGATGACCTATCTGATGCTG 730 Query 313 ATG------CTGATGAAGATGAGTCTGATTTGGATATGGCCTGGAAAATGCTGGACATTG 366 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 731 ATGGTGATGCTGATGAAGATGAGTCTGATTTGGATATGGCCTGGAAAATGCTGGACATTG 790 Query 367 CAAGGGCTATTACTGACAAACAGCCTACTGATACAATGGAAAAATTTGATATACTCTGTT 426 | |||| |||||||||||||||| ||||||| |||||||||||| | ||||||||||||| Sbjct 791 CTAGGGTTATTACTGACAAACAGTCTACTGAGACAATGGAAAAAGTGGATATACTCTGTT 850 Query 427 CCCTTGCTGAAATTTCTTTGGAAAGAGAGG 456 | ||||||||| | || ||||||||||||| Sbjct 851 CGCTTGCTGAAGTGTCCTTGGAAAGAGAGG 880 Score = 60.2 bits (32), Expect = 2e-08 Identities = 32/32 (100%), Gaps = 0/32 (0%) Strand=Plus/Plus Query 43 GGGTTGCACATTATGGTGAACTTGATGCTGAG 74 |||||||||||||||||||||||||||||||| Sbjct 446 GGGTTGCACATTATGGTGAACTTGATGCTGAG 477 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23810985678 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5