BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg927049 Length=1218 Score E Sequences producing significant alignments: (Bits) Value AT1G76520.1 | Symbols: | Auxin efflux carrier family protein |... 1832 0.0 AT1G76530.1 | Symbols: | Auxin efflux carrier family protein |... 675 0.0 AT1G20925.1 | Symbols: | Auxin efflux carrier family protein |... 414 8e-115 > AT1G76520.1 | Symbols: | Auxin efflux carrier family protein | chr1:28715078-28717416 FORWARD LENGTH=1519 Length=1519 Score = 1832 bits (992), Expect = 0.0 Identities = 1128/1194 (94%), Gaps = 7/1194 (1%) Strand=Plus/Plus Query 6 GCGTTAATAATAAAAAGATGGTGAAGCTTTTGGAGCTGTTCATAACTTCATCGAAACCAG 65 ||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 203 GCGTTGATAGTAAAAAGATGGTGAAGCTTTTGGAGCTGTTCATAACTTCATCAAAACCAG 262 Query 66 TTGTGGAGATTCTGTTGATAACATCTGTCGGATTTTATATGGCTCTTGACGGTGTCAATC 125 | || |||||||||||||||||||| |||||||||||||||||||| || || ||||||| Sbjct 263 TCGTTGAGATTCTGTTGATAACATCAGTCGGATTTTATATGGCTCTCGATGGAGTCAATC 322 Query 126 TTCTTGGTCATGATGCTCGCAAATATTTGAACAACATTGTCTTCTATGTGTTTGGTCCTT 185 ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||| Sbjct 323 TTCTTGGTCATGATGCTCGTAAATATCTGAACAACATTGTCTTCTATGTGTTTAGTCCTT 382 Query 186 CGCTTATTGGAAGTCGTTTAGCTGATAGTGTTACATATGAAAGCTTGGTCAAAATGTGGT 245 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 383 CGCTTATTGGAAGCCGTTTAGCTGATAGTGTTACATACGAAAGCTTGGTCAAAATGTGGT 442 Query 246 TTATGCCGGTTAATGTTCTG-TTGACATTCATCATTGGTTCGTTA-TTAGGCTGGATTGT 303 | |||||||| ||||||||| || ||||||||||||||||| ||| || ||||||||||| Sbjct 443 TCATGCCGGTGAATGTTCTGCTT-ACATTCATCATTGGTTCATTACTT-GGCTGGATTGT 500 Query 304 TATTGTCATCACTAAGCCTCCTTCACATCTTCGTGGTCTCATTCTTGGTTGTTGTGCTGC 363 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 501 TATTGTCATCACTAAGCCTCCTTCACACCTTCGTGGTCTCATTCTTGGTTGTTGTGCTGC 560 Query 364 TGGGAATTTGGGGAATATGCCACTGATTATAATCCCAGCCGTTTGTAAAGAAAAAGGAGG 423 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 561 TGGGAATTTGGGGAATATGCCACTGATTATAATCCCAGCTGTTTGTAAAGAAAAAGGAGG 620 Query 424 TCCCTTTGGAGATCCAGAGAGTTGCCAGAAATATGGAATGGGCTATGTTGCTCTCTCCAT 483 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 621 TCCCTTTGGAGATCCTGAGAGTTGCCAGAAATATGGAATGGGTTATGTTGCTCTCTCCAT 680 Query 484 GGCAATGGGATCGATTTACATATGGACTTACGTATACAATCTAATGCGTGTGCTATCGAA 543 ||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 681 GGCTATGGGATCTATTTACATATGGACTTATGTATACAATCTTATGCGTGTGCTATCGAA 740 Query 544 CTCTCCCATTGAAACCCCTCCCTCTGTTGAATCCAACTACGACAGCTACAAAGTTCCACT 603 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 741 CTCTCCCGTTGAAACCCCTCCCTCTGTTGAATCCAACTACGACAGCTACAAAGTTCCCCT 800 Query 604 TATTACTTCTAAGGAAGAAGAAGAAGACAACCAAAAGGCTGGGAGGTGGGAAAAAGTGAA 663 |||| |||| |||||||||| | || ||||||||||||||||||||||||||||||| || Sbjct 801 TATTTCTTCCAAGGAAGAAG-A-AA-ACAACCAAAAGGCTGGGAGGTGGGAAAAAGTCAA 857 Query 664 GCGGAGATTGGTATCACTGTCAGAGAAAGTCAACCTTAAGACAATATTTGCTCCATCAAC 723 |||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||| Sbjct 858 GCGGAGATTGGTTTCACTGTCACAAAAAGTCAACCTTAAGACAATTTTTGCTCCATCAAC 917 Query 724 TATTGCTGCGATGATCGCGCTTGTGATCGGGCTCATTACTCCTTTAAGGAAGCTAATAAT 783 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 918 TATTGCTGCGATGATTGCACTTGTGATCGGGCTCATTACTCCTTTAAGGAAGCTAATAAT 977 Query 784 TGGCACAGAAGCTCCTCTCCGGGTTCTTCAAGATTCAGTAACTCTAGTGGGAGATGGGGC 843 ||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 978 CGGCACGGAAGCTCCTCTCCGGGTGCTTCAAGACTCAGTAACTCTAGTGGGAGATGGGGC 1037 Query 844 AGTTCCTGCTATGACCATGATTATAGGAGGAAACCTACTCAAAGGTTTGAGGAGTTCAGG 903 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1038 AGTTCCTGCAATGACCATGATTATAGGAGGAAACCTACTCAAAGGTTTGAGGAGTTCAGG 1097 Query 904 AATGAAAATGTCCAGTATTATCGGTGTCTTGGTTGCACGCTACGCTTTGCTGCCTATGAG 963 |||||||||||||||||||||||| ||||||||||| || |||| ||| ||||||||||| Sbjct 1098 AATGAAAATGTCCAGTATTATCGGCGTCTTGGTTGCGCGTTACGTTTTACTGCCTATGAG 1157 Query 964 CGGTGTTTTAATCGTAAGAGGAGCATATAAGTTGGATTTAATTACCTCAGAACCATTGTA 1023 |||||||||||||||||||||||||||||||||||||||| |||| ||||| || || || Sbjct 1158 CGGTGTTTTAATCGTAAGAGGAGCATATAAGTTGGATTTAGTTACATCAGAGCCCTTATA 1217 Query 1024 CCAATTCGTTCTTCTTCTTCAGTATGCTGTCCCACCAGCAATGAATCTAGGTACAATTAC 1083 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 1218 CCAATTCGTTCTTCTTCTTCAATATGCTGTCCCACCAGCCATGAATCTAGGTACAATTAC 1277 Query 1084 ACAATTATTCGGAACCGGGGAGAGTGAATGCTCAGTGATTATGCTCTGGACTTACTCTTT 1143 || ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1278 TCAGTTATTTGGAACTGGGGAGAGTGAATGCTCAGTGATTATGCTCTGGACTTACTCTTT 1337 Query 1144 GGCTTCGATTTCACTCACTGTTTGGCCAACATTCTTCATGTGGCTTGTCGCTTA 1197 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1338 GGCTTCGATTGCACTCACTGTTTGGCCAACATTCTTCATGTGGCTTGTAGCTTA 1391 > AT1G76530.1 | Symbols: | Auxin efflux carrier family protein | chr1:28718213-28720371 FORWARD LENGTH=1441 Length=1441 Score = 675 bits (365), Expect = 0.0 Identities = 631/754 (84%), Gaps = 40/754 (5%) Strand=Plus/Plus Query 490 GGGATCGATTTACAT-ATGGACTTACGTATACAATCTAATGCGTGTGCTATCGAACTCTC 548 |||| || ||||| | ||||||||| |||| ||||| |||||||||||||| ||||||| Sbjct 610 GGGAACGGTTTAC-TCATGGACTTATATATA-AATCTTATGCGTGTGCTATCAAACTCTC 667 Query 549 CCATTGAAAC-C-C-CTCCCTCTGTTGAATCCAAC--T-ACGACAGCTACAAAGTTCC-A 601 || ||||||| | | | | |||| ||||||||||| | | ||||||| ||||| ||| | Sbjct 668 CCGTTGAAACACACACACACTCTATTGAATCCAACTATGATGACAGCTGCAAAG-TCCAA 726 Query 602 CTTATTACTTCTAA-G--GAAG---AAGAAGAAGACAACCAAAAGGCTGGGAGGTGGGAA 655 || ||| |||| || | |||| |||||||||||||||| ||| ||||||||||||| Sbjct 727 CTAATTTCTTCCAAGGAAGAAGAAAAAGAAGAAGACAACCATCAGGTTGGGAGGTGGGAA 786 Query 656 AAAGTGAAGCGGAGA-TTGGTATCACTGTCAGAGAAAGTCAACCTTAAGACAATATTTGC 714 |||| |||| ||| || || || |||||| |||||||||||||| | |||||||||| Sbjct 787 GAAGTCAAGCAAAGAGTT-GTTTCTCTGTCAAAGAAAGTCAACCTTGGGTCAATATTTGC 845 Query 715 TCCATCAACTATTGCTGCGATGATCGCGCTTGTGATCGGGCTCATTACTCCTTTAAGGAA 774 |||| ||||||||||||| || |||||||||||||| ||||| ||||||||||||||||| Sbjct 846 TCCAGCAACTATTGCTGCAATTATCGCGCTTGTGATTGGGCTTATTACTCCTTTAAGGAA 905 Query 775 GCTAATAATTGGCACAGAAGCTCCTCTCCGGGTTCTTCAAGATTCAGTAACTCTAGTGGG 834 |||||||| ||||| | ||||||| |||| || ||||||| ||| |||| ||| |||| Sbjct 906 CCTAATAATCGGCACCGTAGCTCCTTTCCGTGTGATTCAAGACTCATTAACCCTATTGGG 965 Query 835 AGATGGGG-CAGTTCCTGCTATGACCATGATTATAGGAGGAAACCTACTCAAAGG--T-- 889 |||||||| || |||||||||||||| ||||| | ||||||||| |||| ||||| | Sbjct 966 AGATGGGGCCA-TTCCTGCTATGACCCTGATTCTTGGAGGAAACTTACTTAAAGGAATGA 1024 Query 890 -----T------TGAGGAGTTCAGGAATGAAAATGTCCAGTATTATCGGTGTCTTGGTTG 938 | |||||||||||| |||||||| ||| | |||||||| |||||||| | Sbjct 1025 GGAGGTCGGAAGTGAGGAGTTCAGAAATGAAAAACTCCTGCATTATCGGCGTCTTGGTAG 1084 Query 939 CACGCTACGCTTTGCTGCCTATGAGCGGTGTTTTAATCGTAAGAGGAGCATATAAGTTGG 998 | || ||| |||||| ||| | |||||||||||| |||| ||||||||||| ||||||| Sbjct 1085 CTCGTTACATTTTGCTACCTGTAAGCGGTGTTTTACTCGTGAGAGGAGCATACAAGTTGG 1144 Query 999 ATTTAATTACCTCAGAACCATTGTACCAATTCGTTCTTCTTCTTCAGTATGCTGTCCCAC 1058 ||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1145 ATTTAGTAACCTCAGAACCCTTGTACCAATTCGTTCTTCTTCTTCAGTATGCTGTCCCAC 1204 Query 1059 CAGCAATGAATCTAGGTACAATTACACAATTATTCGGAACCGGGGAGAGTGAATGCTCAG 1118 |||| |||||||||||||||| || ||||||||||| | ||||||||||||||||| | Sbjct 1205 CAGCCATGAATCTAGGTACAAAGACCCAATTATTCGGCGCTGGGGAGAGTGAATGCTCTG 1264 Query 1119 TGATTATGCTCTGGACTTACTCTTTGGCTTCGA-TTTCACTCACTGTTTGGCCAACATTC 1177 |||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||| Sbjct 1265 TGATTATGCTTTGGACTTACTCTTTGGCTGC-AGTTTCACTCACTGTTTGGCCAACATTC 1323 Query 1178 TTCATGTGGCTTGTCG-CTTAAAcccccccACTC 1210 |||||||||||||| | | |||| |||| ||||| Sbjct 1324 TTCATGTGGCTTGT-GACATAAATCCCCACACTC 1356 Score = 619 bits (335), Expect = 2e-176 Identities = 419/460 (91%), Gaps = 4/460 (1%) Strand=Plus/Plus Query 27 TGAAGCTTTTGGAGCTGTTCATAACTTCATCGAAACCAGTTGTGGAGA-TTCTGTTGATA 85 |||||||||||||| |||||||| |||||||||||||||||||||||| || |||||||| Sbjct 98 TGAAGCTTTTGGAGTTGTTCATAGCTTCATCGAAACCAGTTGTGGAGACTT-TGTTGATA 156 Query 86 ACATCTGTCGGATTTTATATGGCTCTTGACGGTGTCAATCTTCTTGGTCATGATGCTCGC 145 ||||| || ||||||||| ||||||| ||| ||||||||||||||||||||||||||| Sbjct 157 ACATCAGTTGGATTTTATTTGGCTCTCGACACAGTCAATCTTCTTGGTCATGATGCTCGC 216 Query 146 AAATATTTGAACAACATTGTCTTCTATGTGTTTGGTCCTTCGCTTATTGGAAGTCGTTTA 205 ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| Sbjct 217 AAACATTTGAACAACATTGTCTTCTATGTGTTTAGTCCTTCGCTTATTGGAAGCCGCTTA 276 Query 206 GCTGATAGTGTTACATATGAAAGCTTGGTCAAAATGTGGTTTATGCCGGTTAATGTTCTG 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 277 GCTGATAGTGTTACATATGAAAGCTTGGTCAAAATGTGGTTTATGCCGGTTAATGTTCTG 336 Query 266 TTGACATTCATCATTGGTTCGTTATTAGGCTGGATTGTTATTGTCATCACTAAGCCTCCT 325 | |||||||| |||||||||||| | |||||||||||||||||||| |||||||||||| Sbjct 337 CTCACATTCATGATTGGTTCGTTACTCGGCTGGATTGTTATTGTCATAACTAAGCCTCCT 396 Query 326 TCACATCTTCGTGGTCTCATTC-TTGGTTGTTGTGCTGCTGGGAATTTGGGGAATATGCC 384 ||||| |||||||||||||| | || ||||||||||| ||||||||||||||| |||||| Sbjct 397 TCACAGCTTCGTGGTCTCAT-CATTAGTTGTTGTGCTTCTGGGAATTTGGGGACTATGCC 455 Query 385 ACTGATTATAATCCCAGCCGTTTGTAAAGAAAAAGGAGGTCCCTTTGGAGATCCAGAGAG 444 || ||||||||||||||| |||| || || ||||||||||||||||||||| | ||||| Sbjct 456 TCTCATTATAATCCCAGCCATTTGCAAGGAGAAAGGAGGTCCCTTTGGAGATTCTGAGAG 515 Query 445 TTGCCAGAAATATGGAATGGGCTATGTTGCTCTCTCCATG 484 |||| ||||||| |||||||| |||||| | || |||||| Sbjct 516 TTGCGAGAAATACGGAATGGGTTATGTTACACTGTCCATG 555 > AT1G20925.1 | Symbols: | Auxin efflux carrier family protein | chr1:7289973-7292507 FORWARD LENGTH=1419 Length=1419 Score = 414 bits (224), Expect = 8e-115 Identities = 423/519 (82%), Gaps = 14/519 (3%) Strand=Plus/Plus Query 27 TGAAGCTTTTGGAGCTGTTCATAACTTCATCGAAACCAGTTGTGGAGATTCTGTTGATAA 86 ||| ||||||||| ||||||||||| ||||||| |||||||| | ||||||||||||||| Sbjct 266 TGAGGCTTTTGGATCTGTTCATAACCTCATCGATACCAGTTGCGAAGATTCTGTTGATAA 325 Query 87 CATCTGTCGGATTTTA-TATGGCTCTTGA-CGGTGTCAATC-TTCTTGGTCATGATGCTC 143 || | |||||||| | |||||||||| | || || | |||| ||| ||||| Sbjct 326 CAGGAATTGGATTTTACT-TGGCTCTTGATC-AAGTTAA-CATTCTCAATCACGATGCAA 382 Query 144 GCAAATATTTGAACAACATTGTCTTCTATGTGTTTGGTCCTTCGCTTATTGGAAGTC-GT 202 | ||| | | ||||| || || |||||||||||| ||||||| ||| ||| ||| | || Sbjct 383 GAAAACAACTCAACAATATAGTTTTCTATGTGTTTAGTCCTTCTCTTGTTGCAAG-CAGT 441 Query 203 TTAGCTGATAGTGTTACATATGAAAGCTTGGTCAAAATGTGGTTTATGCCGGTTAATGTT 262 ||| |||| | | ||||||| |||||| |||| ||||||||||| ||||| |||||||| Sbjct 442 TTATCTGAGACTATTACATACGAAAGCATGGTGAAAATGTGGTTCATGCCACTTAATGTT 501 Query 263 CTGTTGACATTCATCATTGGTTCGTTATTAGGCTGGATTGTTATTGTCATCACTAAGCCT 322 || | |||||||||||||||||||| || || ||||||||||| |||||||| ||| Sbjct 502 TTGCTAACATTCATCATTGGTTCGTTTTTGGGTTGGATTGTTATCAAAATCACTAAACCT 561 Query 323 CCTTCACATCTTCGTGGTC-TCATTC-TTGGTTGTTGTGCTGCTGGGAATTTGGGGAATA 380 ||||| ||||| ||||| | ||| || ||||||||||||||||||||||||||||||||| Sbjct 562 CCTTCGCATCTCCGTGG-CATCA-TCGTTGGTTGTTGTGCTGCTGGGAATTTGGGGAATA 619 Query 381 TGCCACTGATTATAATCCCAGCCGTTTGTAAAGAAAAAGGAGGTCCCTTTGGAGATCCAG 440 ||||||| ||||| |||||||| | ||||| ||||| ||| |||| ||||||||||| | Sbjct 620 TGCCACTCATTATCATCCCAGCTATATGTAATGAAAAGGGAAGTCCTTTTGGAGATCCTG 679 Query 441 AGAGTTGCCAGAAATATGGAATGGGCTATGTTGCTCTCTCCATGGCAATGGGATCGATTT 500 || ||| |||||| |||| | || ||| |||| ||||| ||||| || ||| | |||| Sbjct 680 AGTCTTGTGAGAAATTTGGACTTGGTTATATTGCACTCTCTATGGCGATTGGAGCCATTT 739 Query 501 ACATATGGACTTACGTATACAATCTAATGCGTG-TGCTA 538 ||||||||||||| ||||||||||| ||||| | ||||| Sbjct 740 ACATATGGACTTATGTATACAATCTTATGCG-GATGCTA 777 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59839049640 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5